EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000016620 (Gene tree)
Gene ID: 101079474
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 10792 bases
Position: chr21:5922910-5933701
Accession: 101079474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000042516	DZF	PF07528.14	6.4e-72	1	1
ENSTRUP00000042516	zf-met	PF12874.7	2.3e-21	1	3
ENSTRUP00000042516	zf-met	PF12874.7	2.3e-21	2	3
ENSTRUP00000042516	zf-met	PF12874.7	2.3e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000042660	-	4638	XM_003974596	ENSTRUP00000042516	1070 (aa)	XP_003974645	H2UZY6

Gene Model

Click here to download ENSTRUG00000016620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000016620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000016620	zfr	98	50.453	ENSTRUG00000011108	zfr2	99	49.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000016620	zfr	100	77.156	ENSG00000056097	ZFR	100	76.412	Homo_sapiens
ENSTRUG00000016620	zfr	100	82.791	ENSAPOG00000009740	zfr	100	83.070	Acanthochromis_polyacanthus
ENSTRUG00000016620	zfr	100	77.410	ENSAMEG00000006184	ZFR	100	76.846	Ailuropoda_melanoleuca
ENSTRUG00000016620	zfr	76	85.541	ENSACIG00000015926	zfr	86	82.151	Amphilophus_citrinellus
ENSTRUG00000016620	zfr	100	83.673	ENSAOCG00000013876	zfr	100	85.622	Amphiprion_ocellaris
ENSTRUG00000016620	zfr	100	87.662	ENSAPEG00000024383	zfr	100	89.054	Amphiprion_percula
ENSTRUG00000016620	zfr	100	88.662	ENSATEG00000010271	zfr	100	88.662	Anabas_testudineus
ENSTRUG00000016620	zfr	78	71.344	ENSAPLG00000015627	-	100	71.813	Anas_platyrhynchos
ENSTRUG00000016620	zfr	100	75.252	ENSACAG00000007880	ZFR	100	75.894	Anolis_carolinensis
ENSTRUG00000016620	zfr	100	77.156	ENSANAG00000023333	ZFR	100	76.321	Aotus_nancymaae
ENSTRUG00000016620	zfr	76	85.662	ENSACLG00000016832	zfr	86	81.808	Astatotilapia_calliptera
ENSTRUG00000016620	zfr	98	82.237	ENSAMXG00000019511	zfr	100	82.707	Astyanax_mexicanus
ENSTRUG00000016620	zfr	100	77.390	ENSBTAG00000008414	ZFR	96	81.089	Bos_taurus
ENSTRUG00000016620	zfr	100	77.001	ENSCJAG00000018740	ZFR	100	76.321	Callithrix_jacchus
ENSTRUG00000016620	zfr	100	75.183	ENSCAFG00000018886	ZFR	99	76.371	Canis_familiaris
ENSTRUG00000016620	zfr	100	77.319	ENSCAFG00020016859	-	100	76.755	Canis_lupus_dingo
ENSTRUG00000016620	zfr	100	77.390	ENSCHIG00000007710	ZFR	100	76.825	Capra_hircus
ENSTRUG00000016620	zfr	97	76.376	ENSTSYG00000010670	ZFR	99	75.637	Carlito_syrichta
ENSTRUG00000016620	zfr	96	62.705	ENSCAPG00000015655	ZFR	100	60.714	Cavia_aperea
ENSTRUG00000016620	zfr	96	71.950	ENSCPOG00000000862	ZFR	100	71.470	Cavia_porcellus
ENSTRUG00000016620	zfr	100	77.156	ENSCCAG00000024473	ZFR	100	76.476	Cebus_capucinus
ENSTRUG00000016620	zfr	100	77.064	ENSCATG00000038311	ZFR	100	76.321	Cercocebus_atys
ENSTRUG00000016620	zfr	97	76.588	ENSCLAG00000007408	ZFR	100	76.938	Chinchilla_lanigera
ENSTRUG00000016620	zfr	100	77.064	ENSCSAG00000017180	ZFR	100	76.321	Chlorocebus_sabaeus
ENSTRUG00000016620	zfr	90	66.759	ENSCHOG00000003848	ZFR	94	66.759	Choloepus_hoffmanni
ENSTRUG00000016620	zfr	100	78.185	ENSCPBG00000024211	ZFR	100	77.778	Chrysemys_picta_bellii
ENSTRUG00000016620	zfr	100	76.972	ENSCANG00000017807	ZFR	100	76.230	Colobus_angolensis_palliatus
ENSTRUG00000016620	zfr	100	76.895	ENSCGRG00001016009	Zfr	100	76.804	Cricetulus_griseus_chok1gshd
ENSTRUG00000016620	zfr	98	75.607	ENSCGRG00000001228	Zfr	98	75.823	Cricetulus_griseus_crigri
ENSTRUG00000016620	zfr	99	84.601	ENSCSEG00000011169	ZFR	99	85.250	Cynoglossus_semilaevis
ENSTRUG00000016620	zfr	97	85.838	ENSCSEG00000009224	zfr	86	83.486	Cynoglossus_semilaevis
ENSTRUG00000016620	zfr	98	83.951	ENSCVAG00000016494	zfr	100	83.681	Cyprinodon_variegatus
ENSTRUG00000016620	zfr	100	81.601	ENSDARG00000027109	zfr	100	82.613	Danio_rerio
ENSTRUG00000016620	zfr	100	77.015	ENSDNOG00000008852	ZFR	100	77.135	Dasypus_novemcinctus
ENSTRUG00000016620	zfr	100	75.160	ENSDORG00000016643	Zfr	100	76.256	Dipodomys_ordii
ENSTRUG00000016620	zfr	100	71.613	ENSETEG00000008937	ZFR	100	72.461	Echinops_telfairi
ENSTRUG00000016620	zfr	100	77.227	ENSEASG00005007104	ZFR	100	76.664	Equus_asinus_asinus
ENSTRUG00000016620	zfr	82	74.832	ENSECAG00000012851	ZFR	99	74.612	Equus_caballus
ENSTRUG00000016620	zfr	84	75.730	ENSEEUG00000014206	ZFR	82	78.802	Erinaceus_europaeus
ENSTRUG00000016620	zfr	99	72.095	ENSELUG00000022743	zfr	99	73.559	Esox_lucius
ENSTRUG00000016620	zfr	100	77.319	ENSFCAG00000000354	ZFR	100	76.755	Felis_catus
ENSTRUG00000016620	zfr	100	76.710	ENSFALG00000002149	ZFR	100	77.079	Ficedula_albicollis
ENSTRUG00000016620	zfr	99	76.695	ENSFDAG00000012993	ZFR	100	75.945	Fukomys_damarensis
ENSTRUG00000016620	zfr	57	80.263	ENSFHEG00000012064	zfr	94	81.224	Fundulus_heteroclitus
ENSTRUG00000016620	zfr	94	91.892	ENSGMOG00000003967	zfr	93	90.323	Gadus_morhua
ENSTRUG00000016620	zfr	100	77.972	ENSGALG00000034488	-	100	77.696	Gallus_gallus
ENSTRUG00000016620	zfr	100	77.808	ENSGALG00000003235	-	100	78.177	Gallus_gallus
ENSTRUG00000016620	zfr	93	80.110	ENSGAFG00000016229	zfr	100	80.000	Gambusia_affinis
ENSTRUG00000016620	zfr	99	83.623	ENSGACG00000005045	zfr	100	83.602	Gasterosteus_aculeatus
ENSTRUG00000016620	zfr	94	77.648	ENSGAGG00000013544	ZFR	99	77.220	Gopherus_agassizii
ENSTRUG00000016620	zfr	100	77.064	ENSGGOG00000016302	ZFR	100	76.321	Gorilla_gorilla
ENSTRUG00000016620	zfr	100	77.185	ENSHGLG00000008088	ZFR	100	76.412	Heterocephalus_glaber_female
ENSTRUG00000016620	zfr	96	76.945	ENSHGLG00100016776	ZFR	99	76.046	Heterocephalus_glaber_male
ENSTRUG00000016620	zfr	100	83.901	ENSHCOG00000001548	zfr	100	83.441	Hippocampus_comes
ENSTRUG00000016620	zfr	100	83.333	ENSIPUG00000008192	zfr	100	83.517	Ictalurus_punctatus
ENSTRUG00000016620	zfr	100	77.306	ENSSTOG00000008742	ZFR	100	76.374	Ictidomys_tridecemlineatus
ENSTRUG00000016620	zfr	99	71.336	ENSJJAG00000023064	Zfr	98	71.737	Jaculus_jaculus
ENSTRUG00000016620	zfr	91	84.842	ENSKMAG00000009468	zfr	99	86.775	Kryptolebias_marmoratus
ENSTRUG00000016620	zfr	100	85.741	ENSLBEG00000010783	zfr	100	85.503	Labrus_bergylta
ENSTRUG00000016620	zfr	100	73.168	ENSLACG00000000831	ZFR	100	74.291	Latimeria_chalumnae
ENSTRUG00000016620	zfr	100	80.776	ENSLOCG00000006727	zfr	100	81.335	Lepisosteus_oculatus
ENSTRUG00000016620	zfr	98	76.476	ENSLAFG00000002308	ZFR	100	75.603	Loxodonta_africana
ENSTRUG00000016620	zfr	100	76.147	ENSMFAG00000042691	ZFR	100	75.410	Macaca_fascicularis
ENSTRUG00000016620	zfr	100	77.064	ENSMMUG00000001317	ZFR	100	76.321	Macaca_mulatta
ENSTRUG00000016620	zfr	100	77.064	ENSMNEG00000029441	ZFR	100	81.089	Macaca_nemestrina
ENSTRUG00000016620	zfr	100	74.793	ENSMLEG00000028503	ZFR	100	75.924	Mandrillus_leucophaeus
ENSTRUG00000016620	zfr	100	86.815	ENSMAMG00000017351	zfr	100	86.908	Mastacembelus_armatus
ENSTRUG00000016620	zfr	76	85.662	ENSMZEG00005021243	zfr	86	81.808	Maylandia_zebra
ENSTRUG00000016620	zfr	96	64.947	ENSMGAG00000002841	ZFR	71	68.212	Meleagris_gallopavo
ENSTRUG00000016620	zfr	100	77.078	ENSMAUG00000000976	Zfr	100	76.530	Mesocricetus_auratus
ENSTRUG00000016620	zfr	100	76.776	ENSMICG00000001244	ZFR	100	76.594	Microcebus_murinus
ENSTRUG00000016620	zfr	100	77.185	ENSMOCG00000018630	Zfr	100	76.621	Microtus_ochrogaster
ENSTRUG00000016620	zfr	100	83.024	ENSMMOG00000012585	zfr	90	85.850	Mola_mola
ENSTRUG00000016620	zfr	100	77.461	ENSMODG00000020412	ZFR	100	77.737	Monodelphis_domestica
ENSTRUG00000016620	zfr	95	91.892	ENSMALG00000007123	zfr	95	96.774	Monopterus_albus
ENSTRUG00000016620	zfr	100	77.156	MGP_CAROLIEiJ_G0019681	Zfr	100	79.195	Mus_caroli
ENSTRUG00000016620	zfr	100	77.064	ENSMUSG00000022201	Zfr	100	81.481	Mus_musculus
ENSTRUG00000016620	zfr	100	77.156	MGP_PahariEiJ_G0016057	Zfr	100	79.195	Mus_pahari
ENSTRUG00000016620	zfr	100	77.156	MGP_SPRETEiJ_G0020574	Zfr	100	79.195	Mus_spretus
ENSTRUG00000016620	zfr	73	74.157	ENSMPUG00000015193	-	99	73.918	Mustela_putorius_furo
ENSTRUG00000016620	zfr	97	76.835	ENSMLUG00000011797	ZFR	99	76.376	Myotis_lucifugus
ENSTRUG00000016620	zfr	100	77.064	ENSNGAG00000018328	Zfr	100	76.476	Nannospalax_galili
ENSTRUG00000016620	zfr	76	81.818	ENSNBRG00000008378	zfr	86	78.311	Neolamprologus_brichardi
ENSTRUG00000016620	zfr	100	74.494	ENSNLEG00000014098	ZFR	100	75.735	Nomascus_leucogenys
ENSTRUG00000016620	zfr	96	71.470	ENSMEUG00000010225	ZFR	100	72.046	Notamacropus_eugenii
ENSTRUG00000016620	zfr	83	84.400	ENSOPRG00000016756	ZFR	84	84.400	Ochotona_princeps
ENSTRUG00000016620	zfr	96	76.533	ENSODEG00000001990	ZFR	100	76.724	Octodon_degus
ENSTRUG00000016620	zfr	100	65.685	ENSONIG00000013960	zfr	74	84.571	Oreochromis_niloticus
ENSTRUG00000016620	zfr	96	78.119	ENSOANG00000014434	ZFR	99	77.756	Ornithorhynchus_anatinus
ENSTRUG00000016620	zfr	100	77.093	ENSOCUG00000016737	ZFR	100	76.321	Oryctolagus_cuniculus
ENSTRUG00000016620	zfr	99	86.088	ENSORLG00000017243	zfr	99	85.528	Oryzias_latipes
ENSTRUG00000016620	zfr	99	86.088	ENSORLG00020014823	zfr	99	85.434	Oryzias_latipes_hni
ENSTRUG00000016620	zfr	99	85.994	ENSORLG00015005801	zfr	99	85.341	Oryzias_latipes_hsok
ENSTRUG00000016620	zfr	99	85.940	ENSOMEG00000003336	zfr	99	85.940	Oryzias_melastigma
ENSTRUG00000016620	zfr	100	74.610	ENSOGAG00000015117	ZFR	100	74.431	Otolemur_garnettii
ENSTRUG00000016620	zfr	97	75.885	ENSOARG00000012233	ZFR	100	74.549	Ovis_aries
ENSTRUG00000016620	zfr	97	76.376	ENSPPAG00000027447	ZFR	99	75.901	Pan_paniscus
ENSTRUG00000016620	zfr	100	77.319	ENSPPRG00000008253	ZFR	100	76.755	Panthera_pardus
ENSTRUG00000016620	zfr	100	74.931	ENSPTIG00000010038	ZFR	99	74.679	Panthera_tigris_altaica
ENSTRUG00000016620	zfr	100	77.156	ENSPTRG00000016771	ZFR	100	76.412	Pan_troglodytes
ENSTRUG00000016620	zfr	100	75.923	ENSPANG00000003729	ZFR	100	75.092	Papio_anubis
ENSTRUG00000016620	zfr	100	73.747	ENSPKIG00000007596	ZFR	100	74.020	Paramormyrops_kingsleyae
ENSTRUG00000016620	zfr	100	81.509	ENSPKIG00000016781	ZFR	100	81.509	Paramormyrops_kingsleyae
ENSTRUG00000016620	zfr	94	84.554	ENSPMGG00000015984	zfr	51	84.554	Periophthalmus_magnuspinnatus
ENSTRUG00000016620	zfr	96	75.261	ENSPEMG00000014573	Zfr	98	75.166	Peromyscus_maniculatus_bairdii
ENSTRUG00000016620	zfr	100	77.369	ENSPCIG00000020906	ZFR	100	81.375	Phascolarctos_cinereus
ENSTRUG00000016620	zfr	99	85.144	ENSPFOG00000005931	zfr	100	85.144	Poecilia_formosa
ENSTRUG00000016620	zfr	99	85.289	ENSPREG00000011947	zfr	100	85.009	Poecilia_reticulata
ENSTRUG00000016620	zfr	97	76.409	ENSPPYG00000015378	ZFR	99	75.545	Pongo_abelii
ENSTRUG00000016620	zfr	100	68.537	ENSPCAG00000007277	ZFR	100	69.315	Procavia_capensis
ENSTRUG00000016620	zfr	95	76.522	ENSPCOG00000000045	ZFR	99	75.935	Propithecus_coquereli
ENSTRUG00000016620	zfr	94	83.133	ENSPVAG00000004780	ZFR	100	70.556	Pteropus_vampyrus
ENSTRUG00000016620	zfr	76	85.662	ENSPNYG00000006239	zfr	86	81.808	Pundamilia_nyererei
ENSTRUG00000016620	zfr	100	83.641	ENSPNAG00000025151	zfr	100	84.089	Pygocentrus_nattereri
ENSTRUG00000016620	zfr	100	76.951	ENSRNOG00000011627	Zfr	100	84.496	Rattus_norvegicus
ENSTRUG00000016620	zfr	100	76.972	ENSRBIG00000041561	ZFR	100	76.230	Rhinopithecus_bieti
ENSTRUG00000016620	zfr	100	76.972	ENSRROG00000044008	ZFR	100	76.230	Rhinopithecus_roxellana
ENSTRUG00000016620	zfr	96	76.724	ENSSBOG00000024150	ZFR	99	75.951	Saimiri_boliviensis_boliviensis
ENSTRUG00000016620	zfr	96	77.181	ENSSHAG00000015478	ZFR	100	77.373	Sarcophilus_harrisii
ENSTRUG00000016620	zfr	100	74.335	ENSSFOG00015017300	ZFR	100	74.406	Scleropages_formosus
ENSTRUG00000016620	zfr	100	86.949	ENSSMAG00000000320	zfr	100	87.776	Scophthalmus_maximus
ENSTRUG00000016620	zfr	100	89.508	ENSSDUG00000013882	zfr	100	89.229	Seriola_dumerili
ENSTRUG00000016620	zfr	76	88.242	ENSSLDG00000000762	zfr	86	83.904	Seriola_lalandi_dorsalis
ENSTRUG00000016620	zfr	89	86.547	ENSSARG00000006571	ZFR	92	86.547	Sorex_araneus
ENSTRUG00000016620	zfr	96	77.490	ENSSPUG00000016786	ZFR	100	76.820	Sphenodon_punctatus
ENSTRUG00000016620	zfr	100	89.508	ENSSPAG00000019293	zfr	100	89.786	Stegastes_partitus
ENSTRUG00000016620	zfr	100	77.319	ENSSSCG00000027681	ZFR	100	76.664	Sus_scrofa
ENSTRUG00000016620	zfr	99	77.613	ENSTGUG00000001909	ZFR	100	76.667	Taeniopygia_guttata
ENSTRUG00000016620	zfr	56	86.789	ENSTNIG00000018856	zfr	100	86.288	Tetraodon_nigroviridis
ENSTRUG00000016620	zfr	95	74.227	ENSTBEG00000017687	ZFR	94	74.227	Tupaia_belangeri
ENSTRUG00000016620	zfr	100	73.095	ENSTTRG00000017321	ZFR	100	72.562	Tursiops_truncatus
ENSTRUG00000016620	zfr	78	74.266	ENSUAMG00000000172	-	99	74.009	Ursus_americanus
ENSTRUG00000016620	zfr	78	74.266	ENSUMAG00000013805	-	99	74.009	Ursus_maritimus
ENSTRUG00000016620	zfr	100	74.931	ENSVPAG00000011011	ZFR	100	74.294	Vicugna_pacos
ENSTRUG00000016620	zfr	100	77.319	ENSVVUG00000022171	-	100	76.755	Vulpes_vulpes
ENSTRUG00000016620	zfr	100	71.904	ENSXETG00000015598	zfr	100	71.944	Xenopus_tropicalis
ENSTRUG00000016620	zfr	99	84.401	ENSXCOG00000009361	zfr	100	84.123	Xiphophorus_couchianus
ENSTRUG00000016620	zfr	99	84.494	ENSXMAG00000013356	zfr	100	84.215	Xiphophorus_maculatus