EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000016861 (Gene tree)
Gene ID: 101074792
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7237 bases
Position: chr9:11423761-11430997
Accession: 101074792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000043207	RRM_1	PF00076.22	4.3e-05	1	1
ENSTRUP00000043205	RRM_1	PF00076.22	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000043350	-	4411	XM_003967500	ENSTRUP00000043205	791 (aa)	XP_003967549	H2V1X5
ENSTRUT00000043352	-	1941	-	ENSTRUP00000043207	646 (aa)	-	H2V1X7

Gene Model

Click here to download ENSTRUG00000016861's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000016861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000016861	cnot4a	92	89.259	ENSG00000080802	CNOT4	100	89.259	Homo_sapiens
ENSTRUG00000016861	cnot4a	93	98.519	ENSAPOG00000016272	cnot4a	98	98.519	Acanthochromis_polyacanthus
ENSTRUG00000016861	cnot4a	91	86.937	ENSAMEG00000012081	CNOT4	92	86.937	Ailuropoda_melanoleuca
ENSTRUG00000016861	cnot4a	100	98.519	ENSACIG00000003011	cnot4a	100	90.238	Amphilophus_citrinellus
ENSTRUG00000016861	cnot4a	100	98.148	ENSAOCG00000010792	cnot4a	100	98.148	Amphiprion_ocellaris
ENSTRUG00000016861	cnot4a	100	98.148	ENSAPEG00000004680	cnot4a	100	98.148	Amphiprion_percula
ENSTRUG00000016861	cnot4a	100	98.148	ENSATEG00000017580	cnot4a	100	98.148	Anabas_testudineus
ENSTRUG00000016861	cnot4a	100	69.221	ENSAPLG00000016441	CNOT4	100	69.098	Anas_platyrhynchos
ENSTRUG00000016861	cnot4a	100	69.716	ENSACAG00000011154	CNOT4	100	69.592	Anolis_carolinensis
ENSTRUG00000016861	cnot4a	92	89.259	ENSANAG00000032156	CNOT4	100	89.259	Aotus_nancymaae
ENSTRUG00000016861	cnot4a	100	98.519	ENSACLG00000002514	cnot4a	100	98.519	Astatotilapia_calliptera
ENSTRUG00000016861	cnot4a	91	89.965	ENSAMXG00000001373	cnot4a	100	87.459	Astyanax_mexicanus
ENSTRUG00000016861	cnot4a	100	91.882	ENSAMXG00000011473	cnot4b	100	91.852	Astyanax_mexicanus
ENSTRUG00000016861	cnot4a	100	71.880	ENSBTAG00000017919	CNOT4	100	72.632	Bos_taurus
ENSTRUG00000016861	cnot4a	92	89.259	ENSCJAG00000012532	CNOT4	100	89.259	Callithrix_jacchus
ENSTRUG00000016861	cnot4a	92	89.259	ENSCAFG00000003223	CNOT4	100	89.259	Canis_familiaris
ENSTRUG00000016861	cnot4a	89	89.259	ENSCAFG00020000093	CNOT4	100	89.259	Canis_lupus_dingo
ENSTRUG00000016861	cnot4a	89	89.259	ENSCHIG00000010955	CNOT4	100	89.259	Capra_hircus
ENSTRUG00000016861	cnot4a	92	89.259	ENSTSYG00000000893	CNOT4	100	89.259	Carlito_syrichta
ENSTRUG00000016861	cnot4a	100	69.925	ENSCAPG00000006213	CNOT4	100	82.178	Cavia_aperea
ENSTRUG00000016861	cnot4a	100	71.880	ENSCPOG00000011526	CNOT4	100	82.508	Cavia_porcellus
ENSTRUG00000016861	cnot4a	100	72.180	ENSCCAG00000024414	CNOT4	94	93.886	Cebus_capucinus
ENSTRUG00000016861	cnot4a	100	71.880	ENSCATG00000022607	CNOT4	100	82.508	Cercocebus_atys
ENSTRUG00000016861	cnot4a	100	72.508	ENSCLAG00000001857	CNOT4	100	82.508	Chinchilla_lanigera
ENSTRUG00000016861	cnot4a	92	89.259	ENSCSAG00000009096	CNOT4	100	89.259	Chlorocebus_sabaeus
ENSTRUG00000016861	cnot4a	63	93.048	ENSCHOG00000010412	CNOT4	67	93.048	Choloepus_hoffmanni
ENSTRUG00000016861	cnot4a	100	69.667	ENSCPBG00000004959	CNOT4	93	89.259	Chrysemys_picta_bellii
ENSTRUG00000016861	cnot4a	55	69.106	ENSCING00000004364	-	56	69.106	Ciona_intestinalis
ENSTRUG00000016861	cnot4a	100	72.030	ENSCANG00000029319	CNOT4	94	89.259	Colobus_angolensis_palliatus
ENSTRUG00000016861	cnot4a	92	89.259	ENSCGRG00001014651	Cnot4	100	89.259	Cricetulus_griseus_chok1gshd
ENSTRUG00000016861	cnot4a	92	89.259	ENSCGRG00000005727	Cnot4	100	89.259	Cricetulus_griseus_crigri
ENSTRUG00000016861	cnot4a	94	98.519	ENSCSEG00000015080	cnot4a	94	98.519	Cynoglossus_semilaevis
ENSTRUG00000016861	cnot4a	100	97.037	ENSCVAG00000009399	cnot4a	100	96.337	Cyprinodon_variegatus
ENSTRUG00000016861	cnot4a	100	77.000	ENSDARG00000007045	cnot4a	100	77.625	Danio_rerio
ENSTRUG00000016861	cnot4a	100	89.247	ENSDARG00000007639	cnot4b	88	91.513	Danio_rerio
ENSTRUG00000016861	cnot4a	100	63.946	ENSDNOG00000009409	CNOT4	100	82.508	Dasypus_novemcinctus
ENSTRUG00000016861	cnot4a	100	72.481	ENSDORG00000012268	Cnot4	100	72.481	Dipodomys_ordii
ENSTRUG00000016861	cnot4a	96	62.712	ENSETEG00000013407	CNOT4	94	77.888	Echinops_telfairi
ENSTRUG00000016861	cnot4a	100	71.729	ENSEASG00005014430	CNOT4	100	82.508	Equus_asinus_asinus
ENSTRUG00000016861	cnot4a	100	71.729	ENSECAG00000020262	CNOT4	100	82.508	Equus_caballus
ENSTRUG00000016861	cnot4a	95	91.698	ENSELUG00000011540	cnot4b	84	91.698	Esox_lucius
ENSTRUG00000016861	cnot4a	99	93.455	ENSELUG00000008742	cnot4a	100	94.465	Esox_lucius
ENSTRUG00000016861	cnot4a	92	89.259	ENSFCAG00000011904	CNOT4	100	89.259	Felis_catus
ENSTRUG00000016861	cnot4a	100	69.468	ENSFALG00000011194	CNOT4	100	69.221	Ficedula_albicollis
ENSTRUG00000016861	cnot4a	92	89.259	ENSFDAG00000013525	CNOT4	100	89.259	Fukomys_damarensis
ENSTRUG00000016861	cnot4a	100	98.148	ENSFHEG00000006608	cnot4a	91	98.148	Fundulus_heteroclitus
ENSTRUG00000016861	cnot4a	96	76.336	ENSGMOG00000001329	cnot4a	100	76.306	Gadus_morhua
ENSTRUG00000016861	cnot4a	100	69.345	ENSGALG00000011682	CNOT4	100	69.538	Gallus_gallus
ENSTRUG00000016861	cnot4a	100	97.778	ENSGACG00000004276	cnot4a	100	97.778	Gasterosteus_aculeatus
ENSTRUG00000016861	cnot4a	99	82.178	ENSGAGG00000017331	CNOT4	93	89.259	Gopherus_agassizii
ENSTRUG00000016861	cnot4a	85	88.426	ENSGGOG00000000142	CNOT4	99	88.426	Gorilla_gorilla
ENSTRUG00000016861	cnot4a	100	98.519	ENSHBUG00000000027	cnot4a	100	98.519	Haplochromis_burtoni
ENSTRUG00000016861	cnot4a	92	89.259	ENSHGLG00000011533	CNOT4	100	89.259	Heterocephalus_glaber_female
ENSTRUG00000016861	cnot4a	83	74.506	ENSHGLG00100013058	CNOT4	94	82.508	Heterocephalus_glaber_male
ENSTRUG00000016861	cnot4a	99	96.667	ENSHCOG00000015815	cnot4a	100	96.667	Hippocampus_comes
ENSTRUG00000016861	cnot4a	100	79.758	ENSIPUG00000016994	cnot4b	100	84.768	Ictalurus_punctatus
ENSTRUG00000016861	cnot4a	100	86.424	ENSIPUG00000006393	cnot4	100	87.459	Ictalurus_punctatus
ENSTRUG00000016861	cnot4a	92	89.259	ENSSTOG00000007717	CNOT4	100	73.414	Ictidomys_tridecemlineatus
ENSTRUG00000016861	cnot4a	68	87.037	ENSJJAG00000019991	-	94	87.037	Jaculus_jaculus
ENSTRUG00000016861	cnot4a	92	89.259	ENSJJAG00000016618	Cnot4	100	89.259	Jaculus_jaculus
ENSTRUG00000016861	cnot4a	96	96.703	ENSKMAG00000004581	cnot4a	100	90.099	Kryptolebias_marmoratus
ENSTRUG00000016861	cnot4a	100	98.148	ENSLBEG00000009999	cnot4a	100	92.597	Labrus_bergylta
ENSTRUG00000016861	cnot4a	100	68.681	ENSLACG00000002647	CNOT4	99	69.939	Latimeria_chalumnae
ENSTRUG00000016861	cnot4a	100	90.842	ENSLOCG00000016126	cnot4a	90	90.842	Lepisosteus_oculatus
ENSTRUG00000016861	cnot4a	100	63.723	ENSLAFG00000000709	CNOT4	100	64.266	Loxodonta_africana
ENSTRUG00000016861	cnot4a	92	89.259	ENSMFAG00000046349	CNOT4	100	89.259	Macaca_fascicularis
ENSTRUG00000016861	cnot4a	100	71.880	ENSMMUG00000016181	CNOT4	100	82.508	Macaca_mulatta
ENSTRUG00000016861	cnot4a	89	89.259	ENSMNEG00000042164	CNOT4	100	89.259	Macaca_nemestrina
ENSTRUG00000016861	cnot4a	100	71.880	ENSMLEG00000032709	CNOT4	94	89.259	Mandrillus_leucophaeus
ENSTRUG00000016861	cnot4a	100	98.519	ENSMAMG00000023194	cnot4a	100	98.524	Mastacembelus_armatus
ENSTRUG00000016861	cnot4a	100	98.519	ENSMZEG00005007312	cnot4a	100	92.593	Maylandia_zebra
ENSTRUG00000016861	cnot4a	100	68.850	ENSMGAG00000011788	CNOT4	100	68.727	Meleagris_gallopavo
ENSTRUG00000016861	cnot4a	92	89.259	ENSMAUG00000020415	Cnot4	100	89.259	Mesocricetus_auratus
ENSTRUG00000016861	cnot4a	100	72.331	ENSMICG00000001667	CNOT4	100	82.508	Microcebus_murinus
ENSTRUG00000016861	cnot4a	92	89.259	ENSMOCG00000020955	Cnot4	100	89.259	Microtus_ochrogaster
ENSTRUG00000016861	cnot4a	85	98.148	ENSMMOG00000014565	cnot4a	95	98.148	Mola_mola
ENSTRUG00000016861	cnot4a	92	89.259	ENSMODG00000014068	CNOT4	100	89.259	Monodelphis_domestica
ENSTRUG00000016861	cnot4a	93	98.148	ENSMALG00000011662	cnot4a	83	98.148	Monopterus_albus
ENSTRUG00000016861	cnot4a	92	89.259	MGP_CAROLIEiJ_G0028217	Cnot4	100	89.259	Mus_caroli
ENSTRUG00000016861	cnot4a	92	89.259	ENSMUSG00000038784	Cnot4	100	89.259	Mus_musculus
ENSTRUG00000016861	cnot4a	92	89.259	MGP_PahariEiJ_G0021974	Cnot4	100	89.259	Mus_pahari
ENSTRUG00000016861	cnot4a	92	89.259	MGP_SPRETEiJ_G0029216	Cnot4	100	89.259	Mus_spretus
ENSTRUG00000016861	cnot4a	92	89.259	ENSMPUG00000004089	CNOT4	100	89.259	Mustela_putorius_furo
ENSTRUG00000016861	cnot4a	100	72.782	ENSMLUG00000008260	CNOT4	100	82.508	Myotis_lucifugus
ENSTRUG00000016861	cnot4a	100	71.579	ENSNGAG00000015030	Cnot4	100	72.331	Nannospalax_galili
ENSTRUG00000016861	cnot4a	100	89.094	ENSNBRG00000021144	cnot4a	100	92.593	Neolamprologus_brichardi
ENSTRUG00000016861	cnot4a	100	71.729	ENSNLEG00000013352	CNOT4	100	82.178	Nomascus_leucogenys
ENSTRUG00000016861	cnot4a	82	67.965	ENSOPRG00000001023	CNOT4	72	98.131	Ochotona_princeps
ENSTRUG00000016861	cnot4a	92	89.259	ENSODEG00000012975	CNOT4	100	82.508	Octodon_degus
ENSTRUG00000016861	cnot4a	100	98.519	ENSONIG00000008656	cnot4a	100	90.852	Oreochromis_niloticus
ENSTRUG00000016861	cnot4a	100	64.626	ENSOANG00000005006	CNOT4	100	64.490	Ornithorhynchus_anatinus
ENSTRUG00000016861	cnot4a	92	89.259	ENSOCUG00000013448	CNOT4	100	65.757	Oryctolagus_cuniculus
ENSTRUG00000016861	cnot4a	100	97.778	ENSORLG00000003727	cnot4a	100	97.070	Oryzias_latipes
ENSTRUG00000016861	cnot4a	100	97.778	ENSORLG00020015684	cnot4a	100	97.070	Oryzias_latipes_hni
ENSTRUG00000016861	cnot4a	100	97.778	ENSORLG00015008470	cnot4a	100	97.070	Oryzias_latipes_hsok
ENSTRUG00000016861	cnot4a	100	98.148	ENSOMEG00000011084	cnot4a	100	97.436	Oryzias_melastigma
ENSTRUG00000016861	cnot4a	100	63.810	ENSOGAG00000015499	CNOT4	100	82.508	Otolemur_garnettii
ENSTRUG00000016861	cnot4a	100	63.451	ENSOARG00000008803	CNOT4	100	82.508	Ovis_aries
ENSTRUG00000016861	cnot4a	100	72.030	ENSPPAG00000041937	CNOT4	100	82.508	Pan_paniscus
ENSTRUG00000016861	cnot4a	100	72.331	ENSPPRG00000023940	CNOT4	100	82.508	Panthera_pardus
ENSTRUG00000016861	cnot4a	92	89.259	ENSPTIG00000016601	CNOT4	100	89.259	Panthera_tigris_altaica
ENSTRUG00000016861	cnot4a	100	71.880	ENSPTRG00000019727	CNOT4	100	82.508	Pan_troglodytes
ENSTRUG00000016861	cnot4a	100	72.030	ENSPANG00000017724	CNOT4	100	82.508	Papio_anubis
ENSTRUG00000016861	cnot4a	100	85.263	ENSPKIG00000018137	cnot4a	100	88.889	Paramormyrops_kingsleyae
ENSTRUG00000016861	cnot4a	100	68.765	ENSPSIG00000011256	CNOT4	100	68.519	Pelodiscus_sinensis
ENSTRUG00000016861	cnot4a	100	90.000	ENSPMGG00000005671	cnot4a	100	96.296	Periophthalmus_magnuspinnatus
ENSTRUG00000016861	cnot4a	100	71.729	ENSPEMG00000021566	Cnot4	100	72.481	Peromyscus_maniculatus_bairdii
ENSTRUG00000016861	cnot4a	92	89.259	ENSPCIG00000029622	CNOT4	96	89.259	Phascolarctos_cinereus
ENSTRUG00000016861	cnot4a	100	98.148	ENSPFOG00000002228	cnot4a	100	88.778	Poecilia_formosa
ENSTRUG00000016861	cnot4a	100	98.148	ENSPLAG00000001780	cnot4a	100	97.436	Poecilia_latipinna
ENSTRUG00000016861	cnot4a	100	98.148	ENSPMEG00000006852	cnot4a	100	97.436	Poecilia_mexicana
ENSTRUG00000016861	cnot4a	100	98.148	ENSPREG00000008171	cnot4a	100	94.964	Poecilia_reticulata
ENSTRUG00000016861	cnot4a	92	89.259	ENSPPYG00000018026	CNOT4	100	89.259	Pongo_abelii
ENSTRUG00000016861	cnot4a	99	75.908	ENSPCOG00000019907	CNOT4	94	89.259	Propithecus_coquereli
ENSTRUG00000016861	cnot4a	92	64.912	ENSPVAG00000004905	CNOT4	90	82.508	Pteropus_vampyrus
ENSTRUG00000016861	cnot4a	100	98.519	ENSPNYG00000004276	cnot4a	100	92.593	Pundamilia_nyererei
ENSTRUG00000016861	cnot4a	100	92.251	ENSPNAG00000008679	cnot4b	100	92.222	Pygocentrus_nattereri
ENSTRUG00000016861	cnot4a	95	94.815	ENSPNAG00000020433	cnot4a	100	94.815	Pygocentrus_nattereri
ENSTRUG00000016861	cnot4a	92	89.259	ENSRNOG00000010795	Cnot4	100	89.259	Rattus_norvegicus
ENSTRUG00000016861	cnot4a	100	71.880	ENSRBIG00000043977	CNOT4	100	82.508	Rhinopithecus_bieti
ENSTRUG00000016861	cnot4a	92	89.259	ENSSBOG00000020808	CNOT4	100	89.259	Saimiri_boliviensis_boliviensis
ENSTRUG00000016861	cnot4a	92	89.259	ENSSHAG00000013639	CNOT4	100	89.259	Sarcophilus_harrisii
ENSTRUG00000016861	cnot4a	100	90.323	ENSSFOG00015017285	CNOT4	100	85.809	Scleropages_formosus
ENSTRUG00000016861	cnot4a	83	91.923	ENSSFOG00015002019	cnot4a	100	90.741	Scleropages_formosus
ENSTRUG00000016861	cnot4a	100	98.519	ENSSMAG00000008614	cnot4a	100	98.524	Scophthalmus_maximus
ENSTRUG00000016861	cnot4a	82	92.910	ENSSDUG00000018585	cnot4b	99	92.910	Seriola_dumerili
ENSTRUG00000016861	cnot4a	100	98.519	ENSSDUG00000022635	cnot4a	100	98.519	Seriola_dumerili
ENSTRUG00000016861	cnot4a	100	98.519	ENSSLDG00000015770	cnot4a	100	98.524	Seriola_lalandi_dorsalis
ENSTRUG00000016861	cnot4a	100	62.073	ENSSLDG00000014347	cnot4b	100	61.998	Seriola_lalandi_dorsalis
ENSTRUG00000016861	cnot4a	96	82.508	ENSSPUG00000004677	CNOT4	100	82.508	Sphenodon_punctatus
ENSTRUG00000016861	cnot4a	100	98.519	ENSSPAG00000012329	cnot4a	100	98.519	Stegastes_partitus
ENSTRUG00000016861	cnot4a	100	72.180	ENSSSCG00000021354	CNOT4	97	89.259	Sus_scrofa
ENSTRUG00000016861	cnot4a	100	69.345	ENSTGUG00000009161	CNOT4	100	69.221	Taeniopygia_guttata
ENSTRUG00000016861	cnot4a	92	93.377	ENSTNIG00000016000	cnot4a	99	93.377	Tetraodon_nigroviridis
ENSTRUG00000016861	cnot4a	89	78.548	ENSTBEG00000002202	CNOT4	88	77.558	Tupaia_belangeri
ENSTRUG00000016861	cnot4a	87	72.526	ENSTTRG00000005122	CNOT4	90	82.508	Tursiops_truncatus
ENSTRUG00000016861	cnot4a	100	72.331	ENSUAMG00000026759	CNOT4	100	82.508	Ursus_americanus
ENSTRUG00000016861	cnot4a	95	82.508	ENSUMAG00000015351	CNOT4	95	82.508	Ursus_maritimus
ENSTRUG00000016861	cnot4a	89	89.259	ENSVVUG00000006200	CNOT4	100	89.259	Vulpes_vulpes
ENSTRUG00000016861	cnot4a	99	89.259	ENSXETG00000010594	cnot4	89	89.259	Xenopus_tropicalis
ENSTRUG00000016861	cnot4a	87	84.354	ENSXCOG00000020824	cnot4a	98	80.174	Xiphophorus_couchianus
ENSTRUG00000016861	cnot4a	100	97.407	ENSXMAG00000016984	cnot4a	100	96.703	Xiphophorus_maculatus