EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017070 (Gene tree)
Gene ID: 101071100
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5314 bases
Position: chr1:6148996-6154309
Accession: 101071100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000043727	SAP	PF02037.27	4.3e-10	1	1
ENSTRUP00000043728	SAP	PF02037.27	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000043873	-	2883	XM_003961528	ENSTRUP00000043727	608 (aa)	XP_003961577	H2V3E5
ENSTRUT00000043874	-	2985	-	ENSTRUP00000043728	642 (aa)	-	H2V3E6

Gene Model

Click here to download ENSTRUG00000017070's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017070	xrcc6	99	55.099	ENSG00000196419	XRCC6	99	55.263	Homo_sapiens
ENSTRUG00000017070	xrcc6	99	80.428	ENSAPOG00000012704	xrcc6	100	80.428	Acanthochromis_polyacanthus
ENSTRUG00000017070	xrcc6	99	80.460	ENSACIG00000021277	xrcc6	99	79.967	Amphilophus_citrinellus
ENSTRUG00000017070	xrcc6	99	80.296	ENSAOCG00000021344	xrcc6	99	79.803	Amphiprion_ocellaris
ENSTRUG00000017070	xrcc6	99	79.967	ENSAPEG00000020712	xrcc6	99	79.475	Amphiprion_percula
ENSTRUG00000017070	xrcc6	99	81.414	ENSATEG00000007119	xrcc6	99	80.921	Anabas_testudineus
ENSTRUG00000017070	xrcc6	90	58.608	ENSAPLG00000004469	XRCC6	98	58.608	Anas_platyrhynchos
ENSTRUG00000017070	xrcc6	99	49.007	ENSANAG00000020017	-	99	49.007	Aotus_nancymaae
ENSTRUG00000017070	xrcc6	99	49.013	ENSANAG00000035230	-	99	49.013	Aotus_nancymaae
ENSTRUG00000017070	xrcc6	99	55.099	ENSANAG00000018684	XRCC6	98	56.434	Aotus_nancymaae
ENSTRUG00000017070	xrcc6	99	46.798	ENSANAG00000023445	-	99	46.580	Aotus_nancymaae
ENSTRUG00000017070	xrcc6	99	79.967	ENSACLG00000018608	xrcc6	99	79.475	Astatotilapia_calliptera
ENSTRUG00000017070	xrcc6	99	73.355	ENSAMXG00000007545	xrcc6	99	73.191	Astyanax_mexicanus
ENSTRUG00000017070	xrcc6	99	55.263	ENSCJAG00000045512	XRCC6	99	55.428	Callithrix_jacchus
ENSTRUG00000017070	xrcc6	99	54.112	ENSTSYG00000011348	XRCC6	99	54.112	Carlito_syrichta
ENSTRUG00000017070	xrcc6	92	55.020	ENSCCAG00000030468	-	99	55.020	Cebus_capucinus
ENSTRUG00000017070	xrcc6	99	46.026	ENSCCAG00000037663	-	96	45.861	Cebus_capucinus
ENSTRUG00000017070	xrcc6	99	51.974	ENSCCAG00000030041	-	94	51.645	Cebus_capucinus
ENSTRUG00000017070	xrcc6	99	44.646	ENSCCAG00000035711	-	99	44.811	Cebus_capucinus
ENSTRUG00000017070	xrcc6	99	55.099	ENSCATG00000042366	XRCC6	99	55.263	Cercocebus_atys
ENSTRUG00000017070	xrcc6	99	54.695	ENSCLAG00000016669	XRCC6	99	54.860	Chinchilla_lanigera
ENSTRUG00000017070	xrcc6	99	55.099	ENSCSAG00000005784	XRCC6	99	55.263	Chlorocebus_sabaeus
ENSTRUG00000017070	xrcc6	99	57.825	ENSCPBG00000020535	XRCC6	99	57.825	Chrysemys_picta_bellii
ENSTRUG00000017070	xrcc6	99	35.362	ENSCING00000000633	-	95	36.034	Ciona_intestinalis
ENSTRUG00000017070	xrcc6	99	55.099	ENSCANG00000031032	XRCC6	99	55.263	Colobus_angolensis_palliatus
ENSTRUG00000017070	xrcc6	99	51.236	ENSCGRG00001019029	Xrcc6	99	51.236	Cricetulus_griseus_chok1gshd
ENSTRUG00000017070	xrcc6	99	56.013	ENSCGRG00000001528	Xrcc6	99	56.013	Cricetulus_griseus_crigri
ENSTRUG00000017070	xrcc6	99	75.534	ENSCSEG00000020434	xrcc6	99	75.534	Cynoglossus_semilaevis
ENSTRUG00000017070	xrcc6	99	76.847	ENSCVAG00000002189	xrcc6	99	76.847	Cyprinodon_variegatus
ENSTRUG00000017070	xrcc6	99	71.875	ENSDARG00000071551	xrcc6	99	71.875	Danio_rerio
ENSTRUG00000017070	xrcc6	57	65.414	ENSETEG00000015333	-	60	65.414	Echinops_telfairi
ENSTRUG00000017070	xrcc6	99	53.279	ENSEASG00005001514	XRCC6	99	53.542	Equus_asinus_asinus
ENSTRUG00000017070	xrcc6	99	53.542	ENSECAG00000017563	XRCC6	99	53.832	Equus_caballus
ENSTRUG00000017070	xrcc6	99	69.951	ENSELUG00000020301	xrcc6	99	69.787	Esox_lucius
ENSTRUG00000017070	xrcc6	95	57.831	ENSFALG00000011908	XRCC6	96	56.301	Ficedula_albicollis
ENSTRUG00000017070	xrcc6	99	79.310	ENSFHEG00000016833	xrcc6	99	79.310	Fundulus_heteroclitus
ENSTRUG00000017070	xrcc6	99	64.332	ENSGMOG00000013524	xrcc6	100	64.169	Gadus_morhua
ENSTRUG00000017070	xrcc6	99	56.046	ENSGALG00000011932	XRCC6	99	56.046	Gallus_gallus
ENSTRUG00000017070	xrcc6	99	76.480	ENSGAFG00000008130	xrcc6	99	76.480	Gambusia_affinis
ENSTRUG00000017070	xrcc6	99	78.502	ENSGACG00000004868	xrcc6	99	78.664	Gasterosteus_aculeatus
ENSTRUG00000017070	xrcc6	99	57.166	ENSGAGG00000017518	XRCC6	99	57.166	Gopherus_agassizii
ENSTRUG00000017070	xrcc6	99	55.099	ENSGGOG00000015885	XRCC6	99	55.263	Gorilla_gorilla
ENSTRUG00000017070	xrcc6	93	80.354	ENSHBUG00000023281	xrcc6	99	80.354	Haplochromis_burtoni
ENSTRUG00000017070	xrcc6	99	53.859	ENSHGLG00000018078	XRCC6	99	53.859	Heterocephalus_glaber_female
ENSTRUG00000017070	xrcc6	99	53.859	ENSHGLG00100011264	XRCC6	99	53.859	Heterocephalus_glaber_male
ENSTRUG00000017070	xrcc6	99	73.892	ENSHCOG00000009821	xrcc6	99	73.892	Hippocampus_comes
ENSTRUG00000017070	xrcc6	99	70.181	ENSIPUG00000000767	xrcc6	99	70.181	Ictalurus_punctatus
ENSTRUG00000017070	xrcc6	99	54.860	ENSSTOG00000009490	XRCC6	99	54.860	Ictidomys_tridecemlineatus
ENSTRUG00000017070	xrcc6	99	50.164	ENSJJAG00000017136	Xrcc6	99	51.236	Jaculus_jaculus
ENSTRUG00000017070	xrcc6	100	79.508	ENSKMAG00000002141	xrcc6	100	79.508	Kryptolebias_marmoratus
ENSTRUG00000017070	xrcc6	99	79.770	ENSLBEG00000002691	xrcc6	99	79.441	Labrus_bergylta
ENSTRUG00000017070	xrcc6	88	69.697	ENSLOCG00000011533	xrcc6	99	69.697	Lepisosteus_oculatus
ENSTRUG00000017070	xrcc6	99	55.099	ENSMFAG00000003352	XRCC6	99	55.263	Macaca_fascicularis
ENSTRUG00000017070	xrcc6	99	55.099	ENSMMUG00000001856	XRCC6	99	55.263	Macaca_mulatta
ENSTRUG00000017070	xrcc6	99	55.099	ENSMNEG00000035076	XRCC6	98	56.330	Macaca_nemestrina
ENSTRUG00000017070	xrcc6	99	55.099	ENSMLEG00000019869	XRCC6	99	55.263	Mandrillus_leucophaeus
ENSTRUG00000017070	xrcc6	96	79.387	ENSMAMG00000003405	xrcc6	97	79.387	Mastacembelus_armatus
ENSTRUG00000017070	xrcc6	99	79.639	ENSMAMG00000003368	xrcc6	99	79.639	Mastacembelus_armatus
ENSTRUG00000017070	xrcc6	99	79.967	ENSMZEG00005028080	xrcc6	99	79.475	Maylandia_zebra
ENSTRUG00000017070	xrcc6	99	56.770	ENSMGAG00000012146	XRCC6	99	56.770	Meleagris_gallopavo
ENSTRUG00000017070	xrcc6	99	56.106	ENSMAUG00000017340	Xrcc6	99	56.106	Mesocricetus_auratus
ENSTRUG00000017070	xrcc6	99	54.125	ENSMOCG00000015717	Xrcc6	99	54.290	Microtus_ochrogaster
ENSTRUG00000017070	xrcc6	99	81.848	ENSMMOG00000003536	xrcc6	99	81.848	Mola_mola
ENSTRUG00000017070	xrcc6	99	79.803	ENSMALG00000013912	xrcc6	95	79.310	Monopterus_albus
ENSTRUG00000017070	xrcc6	99	51.067	MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.067	Mus_caroli
ENSTRUG00000017070	xrcc6	99	55.829	ENSMUSG00000022471	Xrcc6	99	59.696	Mus_musculus
ENSTRUG00000017070	xrcc6	99	55.993	MGP_PahariEiJ_G0020069	Xrcc6	99	55.993	Mus_pahari
ENSTRUG00000017070	xrcc6	96	56.678	MGP_SPRETEiJ_G0020967	Xrcc6	99	56.604	Mus_spretus
ENSTRUG00000017070	xrcc6	99	55.041	ENSNGAG00000013750	Xrcc6	99	55.041	Nannospalax_galili
ENSTRUG00000017070	xrcc6	99	80.131	ENSNBRG00000004125	xrcc6	99	79.639	Neolamprologus_brichardi
ENSTRUG00000017070	xrcc6	95	56.724	ENSOPRG00000002386	XRCC6	99	56.724	Ochotona_princeps
ENSTRUG00000017070	xrcc6	99	53.770	ENSODEG00000015847	XRCC6	99	53.770	Octodon_degus
ENSTRUG00000017070	xrcc6	99	80.099	ENSONIG00000019715	xrcc6	99	79.770	Oreochromis_niloticus
ENSTRUG00000017070	xrcc6	68	57.212	ENSOANG00000011328	XRCC6	99	57.212	Ornithorhynchus_anatinus
ENSTRUG00000017070	xrcc6	99	54.860	ENSOCUG00000006948	XRCC6	99	55.025	Oryctolagus_cuniculus
ENSTRUG00000017070	xrcc6	99	77.377	ENSORLG00020007820	xrcc6	99	77.377	Oryzias_latipes_hni
ENSTRUG00000017070	xrcc6	99	77.213	ENSORLG00015006406	xrcc6	99	77.213	Oryzias_latipes_hsok
ENSTRUG00000017070	xrcc6	99	77.541	ENSOMEG00000008998	xrcc6	99	77.049	Oryzias_melastigma
ENSTRUG00000017070	xrcc6	99	54.366	ENSOGAG00000008821	XRCC6	99	54.366	Otolemur_garnettii
ENSTRUG00000017070	xrcc6	92	55.313	ENSPPAG00000037167	XRCC6	99	51.269	Pan_paniscus
ENSTRUG00000017070	xrcc6	99	55.099	ENSPTRG00000045824	XRCC6	98	56.379	Pan_troglodytes
ENSTRUG00000017070	xrcc6	99	55.099	ENSPTRG00000022548	XRCC6	98	56.379	Pan_troglodytes
ENSTRUG00000017070	xrcc6	99	55.099	ENSPANG00000001252	XRCC6	97	60.699	Papio_anubis
ENSTRUG00000017070	xrcc6	99	69.737	ENSPKIG00000003974	xrcc6	99	71.717	Paramormyrops_kingsleyae
ENSTRUG00000017070	xrcc6	99	75.874	ENSPMGG00000014220	xrcc6	100	76.872	Periophthalmus_magnuspinnatus
ENSTRUG00000017070	xrcc6	99	55.281	ENSPEMG00000023446	Xrcc6	99	55.116	Peromyscus_maniculatus_bairdii
ENSTRUG00000017070	xrcc6	99	57.072	ENSPCIG00000026409	XRCC6	99	57.096	Phascolarctos_cinereus
ENSTRUG00000017070	xrcc6	99	77.668	ENSPFOG00000017173	xrcc6	99	77.011	Poecilia_formosa
ENSTRUG00000017070	xrcc6	99	77.504	ENSPLAG00000000562	xrcc6	99	76.847	Poecilia_latipinna
ENSTRUG00000017070	xrcc6	99	77.504	ENSPMEG00000018478	xrcc6	99	76.847	Poecilia_mexicana
ENSTRUG00000017070	xrcc6	99	78.069	ENSPREG00000020957	xrcc6	93	77.250	Poecilia_reticulata
ENSTRUG00000017070	xrcc6	91	58.757	ENSPPYG00000011876	XRCC6	99	58.757	Pongo_abelii
ENSTRUG00000017070	xrcc6	99	54.876	ENSPVAG00000001168	XRCC6	99	54.711	Pteropus_vampyrus
ENSTRUG00000017070	xrcc6	99	79.803	ENSPNYG00000003815	xrcc6	99	75.469	Pundamilia_nyererei
ENSTRUG00000017070	xrcc6	99	54.516	ENSRNOG00000006392	Xrcc6	99	55.207	Rattus_norvegicus
ENSTRUG00000017070	xrcc6	99	50.822	ENSRBIG00000039794	XRCC6	98	52.241	Rhinopithecus_bieti
ENSTRUG00000017070	xrcc6	99	55.099	ENSRROG00000030297	XRCC6	96	58.371	Rhinopithecus_roxellana
ENSTRUG00000017070	xrcc6	67	50.370	ENSSBOG00000024724	-	99	50.370	Saimiri_boliviensis_boliviensis
ENSTRUG00000017070	xrcc6	99	55.428	ENSSHAG00000010790	XRCC6	99	55.428	Sarcophilus_harrisii
ENSTRUG00000017070	xrcc6	99	69.408	ENSSFOG00015014409	xrcc6	99	69.572	Scleropages_formosus
ENSTRUG00000017070	xrcc6	99	81.773	ENSSMAG00000006496	xrcc6	99	81.281	Scophthalmus_maximus
ENSTRUG00000017070	xrcc6	99	80.131	ENSSDUG00000007542	xrcc6	99	79.639	Seriola_dumerili
ENSTRUG00000017070	xrcc6	99	79.803	ENSSLDG00000009974	xrcc6	99	79.310	Seriola_lalandi_dorsalis
ENSTRUG00000017070	xrcc6	99	56.792	ENSSPUG00000012086	XRCC6	99	56.792	Sphenodon_punctatus
ENSTRUG00000017070	xrcc6	99	80.952	ENSSPAG00000015199	xrcc6	99	80.460	Stegastes_partitus
ENSTRUG00000017070	xrcc6	95	58.003	ENSTGUG00000009852	-	94	58.003	Taeniopygia_guttata
ENSTRUG00000017070	xrcc6	96	84.237	ENSTNIG00000012947	xrcc6	99	84.237	Tetraodon_nigroviridis
ENSTRUG00000017070	xrcc6	95	51.724	ENSTBEG00000011736	XRCC6	99	51.724	Tupaia_belangeri
ENSTRUG00000017070	xrcc6	88	59.559	ENSTTRG00000006749	XRCC6	92	59.559	Tursiops_truncatus
ENSTRUG00000017070	xrcc6	99	78.489	ENSXMAG00000009691	xrcc6	99	77.833	Xiphophorus_maculatus