EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017078 (Gene tree)
Gene ID: 101080130
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4096 bases
Position: chr9:12239845-12243940
Accession: 101080130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000043754	FDF	PF09532.10	2.9e-11	1	1
ENSTRUP00000051073	FDF	PF09532.10	2.9e-11	1	1
ENSTRUP00000043754	LSM14	PF12701.7	3.9e-10	1	1
ENSTRUP00000051073	LSM14	PF12701.7	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000043900	-	3128	XM_011607567	ENSTRUP00000043754	474 (aa)	XP_011605869	H2V3H2
ENSTRUT00000056337	-	3344	XM_003967525	ENSTRUP00000051073	474 (aa)	XP_003967574	UPI0000014A1D

Gene Model

Click here to download ENSTRUG00000017078's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017078	edc3	100	70.138	ENSG00000179151	EDC3	100	78.049	Homo_sapiens
ENSTRUG00000017078	edc3	100	90.377	ENSAPOG00000010791	edc3	100	90.377	Acanthochromis_polyacanthus
ENSTRUG00000017078	edc3	100	59.350	ENSAPOG00000008655	EDC3	100	59.350	Acanthochromis_polyacanthus
ENSTRUG00000017078	edc3	100	69.745	ENSAMEG00000008963	EDC3	100	69.745	Ailuropoda_melanoleuca
ENSTRUG00000017078	edc3	100	90.167	ENSACIG00000017751	edc3	100	90.167	Amphilophus_citrinellus
ENSTRUG00000017078	edc3	100	64.990	ENSACIG00000005330	EDC3	100	64.990	Amphilophus_citrinellus
ENSTRUG00000017078	edc3	100	90.377	ENSAOCG00000005431	edc3	100	90.377	Amphiprion_ocellaris
ENSTRUG00000017078	edc3	100	65.625	ENSAOCG00000009103	-	100	65.625	Amphiprion_ocellaris
ENSTRUG00000017078	edc3	100	90.377	ENSAPEG00000000968	edc3	100	90.377	Amphiprion_percula
ENSTRUG00000017078	edc3	100	65.833	ENSAPEG00000007841	EDC3	100	65.833	Amphiprion_percula
ENSTRUG00000017078	edc3	100	67.220	ENSATEG00000004205	-	100	67.220	Anabas_testudineus
ENSTRUG00000017078	edc3	100	91.632	ENSATEG00000015505	edc3	100	91.632	Anabas_testudineus
ENSTRUG00000017078	edc3	89	70.044	ENSAPLG00000008957	EDC3	100	70.044	Anas_platyrhynchos
ENSTRUG00000017078	edc3	77	67.929	ENSACAG00000000460	-	100	67.929	Anolis_carolinensis
ENSTRUG00000017078	edc3	100	70.334	ENSANAG00000024078	EDC3	100	70.334	Aotus_nancymaae
ENSTRUG00000017078	edc3	100	89.540	ENSACLG00000007232	edc3	100	89.540	Astatotilapia_calliptera
ENSTRUG00000017078	edc3	100	66.667	ENSACLG00000018776	-	100	66.667	Astatotilapia_calliptera
ENSTRUG00000017078	edc3	100	79.167	ENSAMXG00000001589	edc3	100	79.167	Astyanax_mexicanus
ENSTRUG00000017078	edc3	100	69.941	ENSBTAG00000007308	EDC3	100	69.941	Bos_taurus
ENSTRUG00000017078	edc3	100	70.334	ENSCJAG00000017681	EDC3	100	70.334	Callithrix_jacchus
ENSTRUG00000017078	edc3	100	69.352	ENSCAFG00000017935	EDC3	100	69.352	Canis_familiaris
ENSTRUG00000017078	edc3	100	69.352	ENSCAFG00020003909	EDC3	100	69.352	Canis_lupus_dingo
ENSTRUG00000017078	edc3	100	70.138	ENSCHIG00000023658	EDC3	100	70.138	Capra_hircus
ENSTRUG00000017078	edc3	100	70.530	ENSTSYG00000004822	EDC3	100	70.530	Carlito_syrichta
ENSTRUG00000017078	edc3	100	70.334	ENSCPOG00000015595	EDC3	100	70.334	Cavia_porcellus
ENSTRUG00000017078	edc3	100	70.138	ENSCCAG00000021663	EDC3	100	70.138	Cebus_capucinus
ENSTRUG00000017078	edc3	100	69.941	ENSCATG00000037511	EDC3	100	69.941	Cercocebus_atys
ENSTRUG00000017078	edc3	100	70.138	ENSCLAG00000005700	EDC3	100	70.138	Chinchilla_lanigera
ENSTRUG00000017078	edc3	100	69.941	ENSCSAG00000014239	EDC3	100	69.941	Chlorocebus_sabaeus
ENSTRUG00000017078	edc3	100	70.727	ENSCPBG00000024239	EDC3	100	70.727	Chrysemys_picta_bellii
ENSTRUG00000017078	edc3	100	38.703	ENSCING00000022142	-	99	38.703	Ciona_intestinalis
ENSTRUG00000017078	edc3	100	69.941	ENSCANG00000028699	EDC3	100	69.941	Colobus_angolensis_palliatus
ENSTRUG00000017078	edc3	100	69.941	ENSCGRG00001013874	Edc3	100	69.941	Cricetulus_griseus_chok1gshd
ENSTRUG00000017078	edc3	100	69.941	ENSCGRG00000011885	Edc3	100	69.941	Cricetulus_griseus_crigri
ENSTRUG00000017078	edc3	99	90.356	ENSCSEG00000012996	edc3	99	90.356	Cynoglossus_semilaevis
ENSTRUG00000017078	edc3	100	88.494	ENSCVAG00000008023	edc3	100	88.494	Cyprinodon_variegatus
ENSTRUG00000017078	edc3	99	77.030	ENSDARG00000051931	edc3	99	76.436	Danio_rerio
ENSTRUG00000017078	edc3	100	61.434	ENSDNOG00000030661	EDC3	100	61.434	Dasypus_novemcinctus
ENSTRUG00000017078	edc3	69	78.528	ENSETEG00000002398	-	64	78.528	Echinops_telfairi
ENSTRUG00000017078	edc3	100	69.941	ENSEASG00005005071	EDC3	100	69.941	Equus_asinus_asinus
ENSTRUG00000017078	edc3	100	69.941	ENSECAG00000017994	EDC3	100	69.941	Equus_caballus
ENSTRUG00000017078	edc3	100	80.417	ENSELUG00000005794	edc3	100	80.417	Esox_lucius
ENSTRUG00000017078	edc3	100	71.218	ENSELUG00000007607	EDC3	100	71.218	Esox_lucius
ENSTRUG00000017078	edc3	100	69.548	ENSFCAG00000002014	EDC3	100	69.548	Felis_catus
ENSTRUG00000017078	edc3	98	68.675	ENSFALG00000004543	EDC3	96	68.675	Ficedula_albicollis
ENSTRUG00000017078	edc3	100	70.138	ENSFDAG00000012582	EDC3	100	70.138	Fukomys_damarensis
ENSTRUG00000017078	edc3	100	89.958	ENSFHEG00000009375	edc3	100	89.958	Fundulus_heteroclitus
ENSTRUG00000017078	edc3	100	85.447	ENSGMOG00000002715	edc3	100	85.655	Gadus_morhua
ENSTRUG00000017078	edc3	100	70.611	ENSGALG00000040181	EDC3	100	70.611	Gallus_gallus
ENSTRUG00000017078	edc3	100	87.029	ENSGAFG00000014433	edc3	100	87.448	Gambusia_affinis
ENSTRUG00000017078	edc3	100	88.309	ENSGACG00000009783	edc3	100	88.309	Gasterosteus_aculeatus
ENSTRUG00000017078	edc3	99	60.078	ENSGACG00000014671	EDC3	99	60.470	Gasterosteus_aculeatus
ENSTRUG00000017078	edc3	100	71.400	ENSGAGG00000023477	EDC3	100	71.400	Gopherus_agassizii
ENSTRUG00000017078	edc3	100	70.138	ENSGGOG00000003552	EDC3	100	70.138	Gorilla_gorilla
ENSTRUG00000017078	edc3	100	66.875	ENSHBUG00000020817	EDC3	100	66.875	Haplochromis_burtoni
ENSTRUG00000017078	edc3	100	89.540	ENSHBUG00000003635	edc3	100	89.540	Haplochromis_burtoni
ENSTRUG00000017078	edc3	100	86.667	ENSHCOG00000016834	edc3	100	87.083	Hippocampus_comes
ENSTRUG00000017078	edc3	99	78.916	ENSIPUG00000005695	edc3	100	78.916	Ictalurus_punctatus
ENSTRUG00000017078	edc3	100	70.138	ENSSTOG00000013936	EDC3	100	70.138	Ictidomys_tridecemlineatus
ENSTRUG00000017078	edc3	100	70.334	ENSJJAG00000008074	Edc3	100	70.334	Jaculus_jaculus
ENSTRUG00000017078	edc3	100	63.450	ENSKMAG00000001987	EDC3	100	63.450	Kryptolebias_marmoratus
ENSTRUG00000017078	edc3	100	88.727	ENSKMAG00000001243	edc3	100	88.935	Kryptolebias_marmoratus
ENSTRUG00000017078	edc3	100	89.958	ENSLBEG00000013435	edc3	99	90.167	Labrus_bergylta
ENSTRUG00000017078	edc3	100	65.574	ENSLBEG00000017984	EDC3	100	65.574	Labrus_bergylta
ENSTRUG00000017078	edc3	100	71.012	ENSLACG00000014149	EDC3	100	71.012	Latimeria_chalumnae
ENSTRUG00000017078	edc3	99	74.494	ENSLOCG00000014625	edc3	99	74.899	Lepisosteus_oculatus
ENSTRUG00000017078	edc3	100	70.276	ENSLAFG00000002992	EDC3	100	70.276	Loxodonta_africana
ENSTRUG00000017078	edc3	100	69.941	ENSMFAG00000043074	EDC3	100	69.941	Macaca_fascicularis
ENSTRUG00000017078	edc3	100	69.941	ENSMMUG00000011071	EDC3	100	69.941	Macaca_mulatta
ENSTRUG00000017078	edc3	100	69.941	ENSMNEG00000035316	EDC3	100	69.941	Macaca_nemestrina
ENSTRUG00000017078	edc3	100	69.941	ENSMLEG00000030372	EDC3	100	69.941	Mandrillus_leucophaeus
ENSTRUG00000017078	edc3	100	89.958	ENSMAMG00000000505	edc3	100	89.958	Mastacembelus_armatus
ENSTRUG00000017078	edc3	99	66.250	ENSMAMG00000005423	-	99	66.250	Mastacembelus_armatus
ENSTRUG00000017078	edc3	100	66.530	ENSMZEG00005005654	EDC3	100	66.530	Maylandia_zebra
ENSTRUG00000017078	edc3	100	89.331	ENSMZEG00005004892	edc3	100	89.331	Maylandia_zebra
ENSTRUG00000017078	edc3	100	70.217	ENSMGAG00000002617	EDC3	100	70.217	Meleagris_gallopavo
ENSTRUG00000017078	edc3	100	70.334	ENSMICG00000043190	EDC3	100	70.334	Microcebus_murinus
ENSTRUG00000017078	edc3	100	69.548	ENSMOCG00000016205	Edc3	100	69.548	Microtus_ochrogaster
ENSTRUG00000017078	edc3	99	91.614	ENSMMOG00000012278	edc3	99	91.824	Mola_mola
ENSTRUG00000017078	edc3	100	70.138	ENSMODG00000009442	EDC3	100	70.138	Monodelphis_domestica
ENSTRUG00000017078	edc3	100	90.167	ENSMALG00000008658	edc3	100	90.167	Monopterus_albus
ENSTRUG00000017078	edc3	100	69.941	MGP_CAROLIEiJ_G0032280	Edc3	100	76.923	Mus_caroli
ENSTRUG00000017078	edc3	100	69.941	ENSMUSG00000038957	Edc3	100	76.923	Mus_musculus
ENSTRUG00000017078	edc3	100	69.941	MGP_PahariEiJ_G0015146	Edc3	100	76.923	Mus_pahari
ENSTRUG00000017078	edc3	100	69.352	MGP_SPRETEiJ_G0033420	Edc3	100	76.923	Mus_spretus
ENSTRUG00000017078	edc3	100	69.548	ENSMPUG00000017293	EDC3	100	69.548	Mustela_putorius_furo
ENSTRUG00000017078	edc3	100	70.059	ENSMLUG00000016382	EDC3	100	70.059	Myotis_lucifugus
ENSTRUG00000017078	edc3	100	69.548	ENSNGAG00000010923	Edc3	100	69.548	Nannospalax_galili
ENSTRUG00000017078	edc3	100	67.288	ENSNBRG00000007881	EDC3	100	67.288	Neolamprologus_brichardi
ENSTRUG00000017078	edc3	100	89.121	ENSNBRG00000002434	edc3	100	89.121	Neolamprologus_brichardi
ENSTRUG00000017078	edc3	100	61.100	ENSNLEG00000014577	EDC3	100	61.100	Nomascus_leucogenys
ENSTRUG00000017078	edc3	100	70.020	ENSMEUG00000009077	EDC3	100	70.020	Notamacropus_eugenii
ENSTRUG00000017078	edc3	85	77.778	ENSOPRG00000009540	-	79	77.778	Ochotona_princeps
ENSTRUG00000017078	edc3	100	89.749	ENSONIG00000008434	edc3	100	89.749	Oreochromis_niloticus
ENSTRUG00000017078	edc3	100	62.840	ENSONIG00000002932	-	100	62.840	Oreochromis_niloticus
ENSTRUG00000017078	edc3	77	67.506	ENSOCUG00000017740	EDC3	86	67.506	Oryctolagus_cuniculus
ENSTRUG00000017078	edc3	100	85.625	ENSORLG00000004883	edc3	100	85.625	Oryzias_latipes
ENSTRUG00000017078	edc3	100	64.449	ENSORLG00000014399	-	98	64.449	Oryzias_latipes
ENSTRUG00000017078	edc3	100	64.449	ENSORLG00020019446	-	100	64.449	Oryzias_latipes_hni
ENSTRUG00000017078	edc3	100	85.804	ENSORLG00020012262	edc3	100	85.804	Oryzias_latipes_hni
ENSTRUG00000017078	edc3	100	64.241	ENSORLG00015017635	-	96	64.241	Oryzias_latipes_hsok
ENSTRUG00000017078	edc3	100	85.595	ENSORLG00015005634	edc3	100	85.595	Oryzias_latipes_hsok
ENSTRUG00000017078	edc3	100	65.553	ENSOMEG00000017354	EDC3	100	65.553	Oryzias_melastigma
ENSTRUG00000017078	edc3	100	86.402	ENSOMEG00000014026	edc3	100	86.402	Oryzias_melastigma
ENSTRUG00000017078	edc3	100	69.941	ENSOGAG00000014441	EDC3	100	70.138	Otolemur_garnettii
ENSTRUG00000017078	edc3	100	69.412	ENSOARG00000003476	EDC3	100	69.804	Ovis_aries
ENSTRUG00000017078	edc3	100	70.138	ENSPPAG00000040143	EDC3	100	70.138	Pan_paniscus
ENSTRUG00000017078	edc3	100	69.548	ENSPPRG00000006257	EDC3	100	69.548	Panthera_pardus
ENSTRUG00000017078	edc3	100	69.548	ENSPTIG00000017424	EDC3	100	69.548	Panthera_tigris_altaica
ENSTRUG00000017078	edc3	100	70.138	ENSPTRG00000007279	EDC3	100	70.138	Pan_troglodytes
ENSTRUG00000017078	edc3	100	69.941	ENSPANG00000015997	EDC3	100	69.941	Papio_anubis
ENSTRUG00000017078	edc3	100	77.374	ENSPKIG00000019810	EDC3	100	77.374	Paramormyrops_kingsleyae
ENSTRUG00000017078	edc3	100	76.087	ENSPKIG00000004416	edc3	100	76.087	Paramormyrops_kingsleyae
ENSTRUG00000017078	edc3	100	66.405	ENSPSIG00000008474	EDC3	100	67.191	Pelodiscus_sinensis
ENSTRUG00000017078	edc3	100	86.611	ENSPMGG00000007223	edc3	100	86.611	Periophthalmus_magnuspinnatus
ENSTRUG00000017078	edc3	100	69.941	ENSPEMG00000015260	Edc3	100	69.941	Peromyscus_maniculatus_bairdii
ENSTRUG00000017078	edc3	100	70.414	ENSPCIG00000006276	EDC3	70	70.553	Phascolarctos_cinereus
ENSTRUG00000017078	edc3	100	88.912	ENSPFOG00000012204	edc3	100	88.912	Poecilia_formosa
ENSTRUG00000017078	edc3	100	88.912	ENSPLAG00000014420	edc3	100	88.912	Poecilia_latipinna
ENSTRUG00000017078	edc3	100	88.912	ENSPMEG00000023289	edc3	100	88.912	Poecilia_mexicana
ENSTRUG00000017078	edc3	100	88.494	ENSPREG00000016022	edc3	100	88.494	Poecilia_reticulata
ENSTRUG00000017078	edc3	100	69.548	ENSPPYG00000006642	EDC3	100	69.548	Pongo_abelii
ENSTRUG00000017078	edc3	94	77.778	ENSPCAG00000002802	EDC3	88	77.778	Procavia_capensis
ENSTRUG00000017078	edc3	100	70.138	ENSPCOG00000013364	EDC3	100	70.138	Propithecus_coquereli
ENSTRUG00000017078	edc3	100	69.745	ENSPVAG00000014733	EDC3	100	69.745	Pteropus_vampyrus
ENSTRUG00000017078	edc3	100	89.540	ENSPNYG00000021797	edc3	100	89.540	Pundamilia_nyererei
ENSTRUG00000017078	edc3	100	66.875	ENSPNYG00000009669	EDC3	100	66.875	Pundamilia_nyererei
ENSTRUG00000017078	edc3	100	79.365	ENSPNAG00000019657	edc3	100	79.365	Pygocentrus_nattereri
ENSTRUG00000017078	edc3	99	69.960	ENSRNOG00000019579	Edc3	99	70.158	Rattus_norvegicus
ENSTRUG00000017078	edc3	100	69.941	ENSRBIG00000019488	EDC3	100	69.941	Rhinopithecus_bieti
ENSTRUG00000017078	edc3	100	69.941	ENSRROG00000034959	EDC3	100	69.941	Rhinopithecus_roxellana
ENSTRUG00000017078	edc3	100	70.138	ENSSBOG00000004896	EDC3	100	70.138	Saimiri_boliviensis_boliviensis
ENSTRUG00000017078	edc3	96	69.057	ENSSHAG00000015075	EDC3	95	69.057	Sarcophilus_harrisii
ENSTRUG00000017078	edc3	100	79.523	ENSSFOG00015016939	edc3	100	79.920	Scleropages_formosus
ENSTRUG00000017078	edc3	100	74.948	ENSSFOG00015002439	edc3	100	74.490	Scleropages_formosus
ENSTRUG00000017078	edc3	100	90.377	ENSSMAG00000010695	edc3	100	90.377	Scophthalmus_maximus
ENSTRUG00000017078	edc3	99	65.762	ENSSMAG00000010176	-	99	65.762	Scophthalmus_maximus
ENSTRUG00000017078	edc3	100	68.737	ENSSDUG00000007671	EDC3	100	68.737	Seriola_dumerili
ENSTRUG00000017078	edc3	100	91.632	ENSSDUG00000021844	edc3	100	91.841	Seriola_dumerili
ENSTRUG00000017078	edc3	100	91.841	ENSSLDG00000022046	edc3	100	92.050	Seriola_lalandi_dorsalis
ENSTRUG00000017078	edc3	79	79.435	ENSSARG00000003907	EDC3	80	79.435	Sorex_araneus
ENSTRUG00000017078	edc3	100	69.548	ENSSPUG00000008232	EDC3	100	69.548	Sphenodon_punctatus
ENSTRUG00000017078	edc3	100	66.183	ENSSPAG00000020327	EDC3	100	67.015	Stegastes_partitus
ENSTRUG00000017078	edc3	100	90.795	ENSSPAG00000010009	edc3	100	90.795	Stegastes_partitus
ENSTRUG00000017078	edc3	100	72.292	ENSSSCG00000001903	EDC3	100	72.292	Sus_scrofa
ENSTRUG00000017078	edc3	100	70.414	ENSTGUG00000004007	EDC3	100	70.414	Taeniopygia_guttata
ENSTRUG00000017078	edc3	100	95.000	ENSTNIG00000016047	edc3	100	95.000	Tetraodon_nigroviridis
ENSTRUG00000017078	edc3	100	70.472	ENSTTRG00000007990	EDC3	100	70.472	Tursiops_truncatus
ENSTRUG00000017078	edc3	100	69.745	ENSUAMG00000026710	-	100	69.745	Ursus_americanus
ENSTRUG00000017078	edc3	100	69.745	ENSUMAG00000005006	EDC3	96	69.745	Ursus_maritimus
ENSTRUG00000017078	edc3	85	68.519	ENSVPAG00000003499	-	79	68.519	Vicugna_pacos
ENSTRUG00000017078	edc3	100	69.548	ENSVVUG00000018601	EDC3	100	69.548	Vulpes_vulpes
ENSTRUG00000017078	edc3	73	75.931	ENSXETG00000010622	edc3	99	77.364	Xenopus_tropicalis
ENSTRUG00000017078	edc3	100	88.703	ENSXMAG00000007377	edc3	100	88.703	Xiphophorus_maculatus