EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017185 (Gene tree)
Gene ID: 101079454
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5757 bases
Position: chr13:11993367-11999123
Accession: 101079454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000044019	ResIII	PF04851.15	1e-15	1	1
ENSTRUP00000049385	ResIII	PF04851.15	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050660	-	3859	XM_003969657	ENSTRUP00000049385	781 (aa)	XP_003969706	UPI000298EDA1
ENSTRUT00000044167	-	2322	-	ENSTRUP00000044019	773 (aa)	-	H2V485

Gene Model

Click here to download ENSTRUG00000017185's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03022	Basal transcription factors	KEGG
tru03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017185	ercc3	100	86.879	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSTRUG00000017185	ercc3	100	92.209	ENSAPOG00000014383	ercc3	100	91.954	Acanthochromis_polyacanthus
ENSTRUG00000017185	ercc3	100	86.115	ENSAMEG00000016840	ERCC3	100	86.497	Ailuropoda_melanoleuca
ENSTRUG00000017185	ercc3	99	92.000	ENSACIG00000000126	ercc3	100	92.000	Amphilophus_citrinellus
ENSTRUG00000017185	ercc3	100	92.082	ENSAOCG00000009396	ercc3	100	91.826	Amphiprion_ocellaris
ENSTRUG00000017185	ercc3	100	91.954	ENSAPEG00000023077	ercc3	100	91.699	Amphiprion_percula
ENSTRUG00000017185	ercc3	100	92.082	ENSATEG00000014860	ercc3	100	92.209	Anabas_testudineus
ENSTRUG00000017185	ercc3	91	87.887	ENSAPLG00000012068	ERCC3	98	87.887	Anas_platyrhynchos
ENSTRUG00000017185	ercc3	92	88.072	ENSACAG00000009919	ERCC3	100	88.072	Anolis_carolinensis
ENSTRUG00000017185	ercc3	100	86.752	ENSANAG00000031091	ERCC3	100	86.752	Aotus_nancymaae
ENSTRUG00000017185	ercc3	100	92.209	ENSACLG00000022508	ercc3	100	92.209	Astatotilapia_calliptera
ENSTRUG00000017185	ercc3	100	90.153	ENSAMXG00000036947	ercc3	100	90.026	Astyanax_mexicanus
ENSTRUG00000017185	ercc3	100	86.497	ENSBTAG00000020777	ERCC3	100	86.497	Bos_taurus
ENSTRUG00000017185	ercc3	99	62.688	WBGene00013441	xpb-1	97	63.613	Caenorhabditis_elegans
ENSTRUG00000017185	ercc3	100	86.752	ENSCJAG00000010416	ERCC3	100	86.752	Callithrix_jacchus
ENSTRUG00000017185	ercc3	97	88.344	ENSCAFG00000004497	ERCC3	100	86.445	Canis_familiaris
ENSTRUG00000017185	ercc3	97	88.344	ENSCAFG00020003495	ERCC3	100	86.445	Canis_lupus_dingo
ENSTRUG00000017185	ercc3	100	86.624	ENSCHIG00000014551	ERCC3	100	86.624	Capra_hircus
ENSTRUG00000017185	ercc3	99	86.521	ENSTSYG00000004137	ERCC3	99	86.822	Carlito_syrichta
ENSTRUG00000017185	ercc3	89	74.096	ENSCAPG00000017027	ERCC3	100	74.096	Cavia_aperea
ENSTRUG00000017185	ercc3	100	85.350	ENSCPOG00000002144	ERCC3	100	85.478	Cavia_porcellus
ENSTRUG00000017185	ercc3	100	86.879	ENSCCAG00000024421	ERCC3	100	86.879	Cebus_capucinus
ENSTRUG00000017185	ercc3	100	86.879	ENSCATG00000032313	ERCC3	100	86.879	Cercocebus_atys
ENSTRUG00000017185	ercc3	100	85.732	ENSCLAG00000002965	ERCC3	96	85.605	Chinchilla_lanigera
ENSTRUG00000017185	ercc3	100	86.752	ENSCSAG00000016827	ERCC3	100	86.752	Chlorocebus_sabaeus
ENSTRUG00000017185	ercc3	83	94.152	ENSCHOG00000007414	ERCC3	83	94.152	Choloepus_hoffmanni
ENSTRUG00000017185	ercc3	92	88.211	ENSCPBG00000013638	ERCC3	100	88.211	Chrysemys_picta_bellii
ENSTRUG00000017185	ercc3	96	70.980	ENSCING00000002867	ercc3	96	70.980	Ciona_intestinalis
ENSTRUG00000017185	ercc3	100	86.879	ENSCANG00000007094	ERCC3	100	86.879	Colobus_angolensis_palliatus
ENSTRUG00000017185	ercc3	100	86.115	ENSCGRG00001009426	Ercc3	100	86.624	Cricetulus_griseus_chok1gshd
ENSTRUG00000017185	ercc3	97	85.940	ENSCGRG00000015547	Ercc3	100	86.465	Cricetulus_griseus_crigri
ENSTRUG00000017185	ercc3	100	89.809	ENSCSEG00000016479	ercc3	100	89.936	Cynoglossus_semilaevis
ENSTRUG00000017185	ercc3	97	92.980	ENSCVAG00000015177	ercc3	100	91.954	Cyprinodon_variegatus
ENSTRUG00000017185	ercc3	97	91.270	ENSDARG00000002402	ercc3	100	90.166	Danio_rerio
ENSTRUG00000017185	ercc3	57	92.081	ENSDNOG00000035027	ERCC3	95	92.081	Dasypus_novemcinctus
ENSTRUG00000017185	ercc3	97	88.742	ENSDORG00000004671	Ercc3	100	86.957	Dipodomys_ordii
ENSTRUG00000017185	ercc3	99	67.960	FBgn0001179	hay	99	67.413	Drosophila_melanogaster
ENSTRUG00000017185	ercc3	90	88.376	ENSETEG00000019887	ERCC3	90	88.376	Echinops_telfairi
ENSTRUG00000017185	ercc3	99	79.620	ENSEBUG00000009773	ercc3	99	79.620	Eptatretus_burgeri
ENSTRUG00000017185	ercc3	100	83.975	ENSEASG00005022466	ERCC3	100	84.348	Equus_asinus_asinus
ENSTRUG00000017185	ercc3	100	86.497	ENSECAG00000006589	ERCC3	100	86.497	Equus_caballus
ENSTRUG00000017185	ercc3	91	88.748	ENSEEUG00000001057	ERCC3	97	88.748	Erinaceus_europaeus
ENSTRUG00000017185	ercc3	100	89.809	ENSELUG00000000089	ercc3	99	89.809	Esox_lucius
ENSTRUG00000017185	ercc3	100	86.115	ENSFCAG00000006989	ERCC3	100	86.752	Felis_catus
ENSTRUG00000017185	ercc3	97	86.772	ENSFALG00000003936	ERCC3	96	86.772	Ficedula_albicollis
ENSTRUG00000017185	ercc3	100	84.968	ENSFDAG00000011924	ERCC3	100	85.096	Fukomys_damarensis
ENSTRUG00000017185	ercc3	100	91.315	ENSFHEG00000005185	ercc3	100	91.315	Fundulus_heteroclitus
ENSTRUG00000017185	ercc3	100	87.836	ENSGMOG00000018032	ercc3	99	87.836	Gadus_morhua
ENSTRUG00000017185	ercc3	97	87.550	ENSGALG00000011515	ERCC3	100	85.422	Gallus_gallus
ENSTRUG00000017185	ercc3	100	92.209	ENSGAFG00000011936	ercc3	100	92.209	Gambusia_affinis
ENSTRUG00000017185	ercc3	100	90.446	ENSGACG00000015218	ercc3	99	92.308	Gasterosteus_aculeatus
ENSTRUG00000017185	ercc3	92	88.350	ENSGAGG00000018579	ERCC3	100	88.350	Gopherus_agassizii
ENSTRUG00000017185	ercc3	100	86.879	ENSGGOG00000015255	ERCC3	100	86.879	Gorilla_gorilla
ENSTRUG00000017185	ercc3	100	92.209	ENSHBUG00000003818	ercc3	100	92.209	Haplochromis_burtoni
ENSTRUG00000017185	ercc3	100	86.115	ENSHGLG00000011014	ERCC3	100	85.987	Heterocephalus_glaber_female
ENSTRUG00000017185	ercc3	100	86.115	ENSHGLG00100013806	ERCC3	100	85.987	Heterocephalus_glaber_male
ENSTRUG00000017185	ercc3	100	89.272	ENSHCOG00000016924	ercc3	100	89.783	Hippocampus_comes
ENSTRUG00000017185	ercc3	100	89.514	ENSIPUG00000021000	ercc3	100	89.642	Ictalurus_punctatus
ENSTRUG00000017185	ercc3	100	86.115	ENSSTOG00000011001	ERCC3	100	86.624	Ictidomys_tridecemlineatus
ENSTRUG00000017185	ercc3	90	87.288	ENSJJAG00000001117	Ercc3	100	87.288	Jaculus_jaculus
ENSTRUG00000017185	ercc3	100	91.188	ENSKMAG00000021764	ercc3	100	91.188	Kryptolebias_marmoratus
ENSTRUG00000017185	ercc3	100	92.082	ENSLBEG00000000468	ercc3	100	92.082	Labrus_bergylta
ENSTRUG00000017185	ercc3	97	83.551	ENSLACG00000014815	ERCC3	100	81.910	Latimeria_chalumnae
ENSTRUG00000017185	ercc3	90	86.704	ENSLOCG00000010907	ercc3	87	86.704	Lepisosteus_oculatus
ENSTRUG00000017185	ercc3	100	85.478	ENSLAFG00000014866	ERCC3	100	85.987	Loxodonta_africana
ENSTRUG00000017185	ercc3	100	86.879	ENSMFAG00000003370	ERCC3	100	86.879	Macaca_fascicularis
ENSTRUG00000017185	ercc3	100	83.145	ENSMNEG00000004215	ERCC3	100	83.145	Macaca_nemestrina
ENSTRUG00000017185	ercc3	100	86.879	ENSMLEG00000042061	ERCC3	100	86.879	Mandrillus_leucophaeus
ENSTRUG00000017185	ercc3	100	91.699	ENSMAMG00000004505	ercc3	99	91.699	Mastacembelus_armatus
ENSTRUG00000017185	ercc3	100	92.209	ENSMZEG00005004854	ercc3	100	92.209	Maylandia_zebra
ENSTRUG00000017185	ercc3	90	88.260	ENSMGAG00000011706	ERCC3	100	88.260	Meleagris_gallopavo
ENSTRUG00000017185	ercc3	100	86.005	ENSMAUG00000004515	Ercc3	100	86.514	Mesocricetus_auratus
ENSTRUG00000017185	ercc3	100	86.115	ENSMICG00000009578	ERCC3	100	86.624	Microcebus_murinus
ENSTRUG00000017185	ercc3	100	85.987	ENSMOCG00000021767	Ercc3	100	86.497	Microtus_ochrogaster
ENSTRUG00000017185	ercc3	99	91.731	ENSMMOG00000018174	ercc3	99	91.731	Mola_mola
ENSTRUG00000017185	ercc3	97	88.344	ENSMODG00000018695	ERCC3	100	87.006	Monodelphis_domestica
ENSTRUG00000017185	ercc3	100	91.315	ENSMALG00000014944	ercc3	100	91.315	Monopterus_albus
ENSTRUG00000017185	ercc3	100	85.860	MGP_CAROLIEiJ_G0022075	Ercc3	100	86.369	Mus_caroli
ENSTRUG00000017185	ercc3	100	85.223	ENSMUSG00000024382	Ercc3	100	85.732	Mus_musculus
ENSTRUG00000017185	ercc3	100	85.732	MGP_PahariEiJ_G0018809	Ercc3	100	86.242	Mus_pahari
ENSTRUG00000017185	ercc3	100	85.096	MGP_SPRETEiJ_G0022987	Ercc3	100	85.605	Mus_spretus
ENSTRUG00000017185	ercc3	100	86.115	ENSMPUG00000012021	ERCC3	100	86.752	Mustela_putorius_furo
ENSTRUG00000017185	ercc3	93	84.636	ENSMLUG00000007429	ERCC3	99	84.636	Myotis_lucifugus
ENSTRUG00000017185	ercc3	99	83.291	ENSNGAG00000019598	Ercc3	99	87.772	Nannospalax_galili
ENSTRUG00000017185	ercc3	100	92.209	ENSNBRG00000019074	ercc3	100	92.209	Neolamprologus_brichardi
ENSTRUG00000017185	ercc3	92	86.370	ENSNLEG00000015665	ERCC3	97	86.370	Nomascus_leucogenys
ENSTRUG00000017185	ercc3	100	84.586	ENSOPRG00000004553	ERCC3	100	84.586	Ochotona_princeps
ENSTRUG00000017185	ercc3	100	86.497	ENSODEG00000005795	ERCC3	100	86.369	Octodon_degus
ENSTRUG00000017185	ercc3	100	92.082	ENSONIG00000003255	ercc3	100	92.082	Oreochromis_niloticus
ENSTRUG00000017185	ercc3	100	86.497	ENSOCUG00000002248	ERCC3	100	87.006	Oryctolagus_cuniculus
ENSTRUG00000017185	ercc3	100	89.911	ENSORLG00000004393	ercc3	100	89.911	Oryzias_latipes
ENSTRUG00000017185	ercc3	100	89.796	ENSORLG00020017718	ercc3	99	90.921	Oryzias_latipes_hni
ENSTRUG00000017185	ercc3	100	90.038	ENSORLG00015015695	ercc3	100	90.038	Oryzias_latipes_hsok
ENSTRUG00000017185	ercc3	100	91.060	ENSOMEG00000015374	ercc3	100	91.060	Oryzias_melastigma
ENSTRUG00000017185	ercc3	100	86.404	ENSOGAG00000009103	ERCC3	100	86.912	Otolemur_garnettii
ENSTRUG00000017185	ercc3	100	86.497	ENSOARG00000016147	ERCC3	100	86.497	Ovis_aries
ENSTRUG00000017185	ercc3	100	86.879	ENSPPAG00000036166	ERCC3	100	86.879	Pan_paniscus
ENSTRUG00000017185	ercc3	100	86.242	ENSPPRG00000001305	ERCC3	100	86.879	Panthera_pardus
ENSTRUG00000017185	ercc3	92	88.488	ENSPTIG00000016969	ERCC3	100	88.488	Panthera_tigris_altaica
ENSTRUG00000017185	ercc3	100	86.879	ENSPTRG00000046940	ERCC3	100	86.879	Pan_troglodytes
ENSTRUG00000017185	ercc3	100	86.879	ENSPANG00000007699	ERCC3	100	86.879	Papio_anubis
ENSTRUG00000017185	ercc3	100	88.633	ENSPKIG00000001319	ercc3	100	90.331	Paramormyrops_kingsleyae
ENSTRUG00000017185	ercc3	92	87.933	ENSPSIG00000014682	ERCC3	100	87.933	Pelodiscus_sinensis
ENSTRUG00000017185	ercc3	97	92.573	ENSPMGG00000017885	ercc3	99	91.560	Periophthalmus_magnuspinnatus
ENSTRUG00000017185	ercc3	100	86.242	ENSPEMG00000013733	Ercc3	100	86.752	Peromyscus_maniculatus_bairdii
ENSTRUG00000017185	ercc3	90	78.852	ENSPMAG00000005081	ercc3	99	78.852	Petromyzon_marinus
ENSTRUG00000017185	ercc3	100	86.607	ENSPCIG00000011821	ERCC3	100	87.134	Phascolarctos_cinereus
ENSTRUG00000017185	ercc3	97	93.775	ENSPFOG00000015604	ercc3	100	92.848	Poecilia_formosa
ENSTRUG00000017185	ercc3	97	91.149	ENSPLAG00000022245	ercc3	100	93.897	Poecilia_latipinna
ENSTRUG00000017185	ercc3	97	93.775	ENSPMEG00000016987	ercc3	100	92.848	Poecilia_mexicana
ENSTRUG00000017185	ercc3	100	92.465	ENSPREG00000020921	ercc3	100	92.465	Poecilia_reticulata
ENSTRUG00000017185	ercc3	100	86.132	ENSPPYG00000012769	ERCC3	100	86.132	Pongo_abelii
ENSTRUG00000017185	ercc3	100	86.879	ENSPCOG00000024903	ERCC3	100	86.879	Propithecus_coquereli
ENSTRUG00000017185	ercc3	90	86.822	ENSPVAG00000013774	ERCC3	90	86.822	Pteropus_vampyrus
ENSTRUG00000017185	ercc3	100	92.209	ENSPNYG00000001208	ercc3	100	92.209	Pundamilia_nyererei
ENSTRUG00000017185	ercc3	100	89.911	ENSPNAG00000005748	ercc3	100	89.783	Pygocentrus_nattereri
ENSTRUG00000017185	ercc3	100	85.987	ENSRNOG00000013180	Ercc3	100	86.497	Rattus_norvegicus
ENSTRUG00000017185	ercc3	100	86.752	ENSRBIG00000027692	ERCC3	100	86.752	Rhinopithecus_bieti
ENSTRUG00000017185	ercc3	100	86.752	ENSRROG00000040673	ERCC3	100	86.752	Rhinopithecus_roxellana
ENSTRUG00000017185	ercc3	99	52.889	YIL143C	SSL2	85	55.480	Saccharomyces_cerevisiae
ENSTRUG00000017185	ercc3	100	86.624	ENSSBOG00000023079	ERCC3	100	86.624	Saimiri_boliviensis_boliviensis
ENSTRUG00000017185	ercc3	97	88.079	ENSSHAG00000007423	ERCC3	100	86.752	Sarcophilus_harrisii
ENSTRUG00000017185	ercc3	97	90.464	ENSSFOG00015012753	ercc3	100	88.633	Scleropages_formosus
ENSTRUG00000017185	ercc3	100	90.955	ENSSMAG00000011915	ercc3	100	90.955	Scophthalmus_maximus
ENSTRUG00000017185	ercc3	100	92.337	ENSSDUG00000021181	ercc3	100	92.337	Seriola_dumerili
ENSTRUG00000017185	ercc3	100	92.337	ENSSLDG00000008744	ercc3	98	92.337	Seriola_lalandi_dorsalis
ENSTRUG00000017185	ercc3	55	80.184	ENSSARG00000000751	-	85	80.184	Sorex_araneus
ENSTRUG00000017185	ercc3	90	86.421	ENSSPUG00000015183	ERCC3	91	86.421	Sphenodon_punctatus
ENSTRUG00000017185	ercc3	100	92.209	ENSSPAG00000004748	ercc3	100	91.699	Stegastes_partitus
ENSTRUG00000017185	ercc3	100	86.752	ENSSSCG00000015721	ERCC3	100	88.694	Sus_scrofa
ENSTRUG00000017185	ercc3	97	87.947	ENSTGUG00000004920	-	97	88.212	Taeniopygia_guttata
ENSTRUG00000017185	ercc3	98	93.586	ENSTNIG00000005457	ercc3	99	94.444	Tetraodon_nigroviridis
ENSTRUG00000017185	ercc3	80	88.057	ENSTBEG00000009381	ERCC3	81	88.057	Tupaia_belangeri
ENSTRUG00000017185	ercc3	68	92.830	ENSUAMG00000009589	-	100	92.830	Ursus_americanus
ENSTRUG00000017185	ercc3	100	85.860	ENSUMAG00000008361	ERCC3	100	86.497	Ursus_maritimus
ENSTRUG00000017185	ercc3	92	88.627	ENSVVUG00000010431	ERCC3	100	88.627	Vulpes_vulpes
ENSTRUG00000017185	ercc3	100	84.645	ENSXETG00000033646	ercc3	100	84.645	Xenopus_tropicalis
ENSTRUG00000017185	ercc3	99	91.979	ENSXCOG00000001791	ercc3	99	91.979	Xiphophorus_couchianus
ENSTRUG00000017185	ercc3	100	92.465	ENSXMAG00000003641	ercc3	100	92.465	Xiphophorus_maculatus