EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000017380 (Gene tree)
Gene ID: 101064938
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3579 bases
Position: chr20:7840976-7844554
Accession: 101064938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000044517	MMR_HSR1	PF01926.23	8.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000044667	-	1818	XM_003974214	ENSTRUP00000044517	605 (aa)	XP_003974263	H2V5N3

Gene Model

Click here to download ENSTRUG00000017380's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000017380	lsg1	64	31.754	ENSTRUG00000011226	gnl1	61	31.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017380	lsg1	99	60.817	ENSG00000041802	LSG1	89	75.316	Homo_sapiens
ENSTRUG00000017380	lsg1	100	74.803	ENSAPOG00000009694	lsg1	98	74.798	Acanthochromis_polyacanthus
ENSTRUG00000017380	lsg1	100	60.150	ENSAMEG00000009343	LSG1	98	59.630	Ailuropoda_melanoleuca
ENSTRUG00000017380	lsg1	98	77.229	ENSACIG00000012406	lsg1	97	77.120	Amphilophus_citrinellus
ENSTRUG00000017380	lsg1	100	73.913	ENSAOCG00000016066	lsg1	98	74.204	Amphiprion_ocellaris
ENSTRUG00000017380	lsg1	100	74.326	ENSAPEG00000003252	lsg1	98	74.959	Amphiprion_percula
ENSTRUG00000017380	lsg1	98	75.439	ENSATEG00000011794	lsg1	97	75.321	Anabas_testudineus
ENSTRUG00000017380	lsg1	95	56.960	ENSACAG00000004222	LSG1	100	57.760	Anolis_carolinensis
ENSTRUG00000017380	lsg1	99	61.187	ENSANAG00000021153	LSG1	97	61.934	Aotus_nancymaae
ENSTRUG00000017380	lsg1	100	75.994	ENSACLG00000000520	lsg1	98	75.705	Astatotilapia_calliptera
ENSTRUG00000017380	lsg1	100	67.547	ENSAMXG00000008271	lsg1	98	68.819	Astyanax_mexicanus
ENSTRUG00000017380	lsg1	99	61.350	ENSBTAG00000008461	LSG1	97	61.875	Bos_taurus
ENSTRUG00000017380	lsg1	68	50.802	WBGene00016907	C53H9.2	72	61.165	Caenorhabditis_elegans
ENSTRUG00000017380	lsg1	99	61.515	ENSCJAG00000013962	LSG1	97	61.646	Callithrix_jacchus
ENSTRUG00000017380	lsg1	95	61.807	ENSCAFG00000013445	LSG1	100	61.331	Canis_familiaris
ENSTRUG00000017380	lsg1	100	60.150	ENSCAFG00020002216	LSG1	99	60.606	Canis_lupus_dingo
ENSTRUG00000017380	lsg1	100	62.191	ENSCHIG00000015769	LSG1	98	62.303	Capra_hircus
ENSTRUG00000017380	lsg1	99	61.702	ENSTSYG00000001447	LSG1	97	61.491	Carlito_syrichta
ENSTRUG00000017380	lsg1	94	61.102	ENSCAPG00000009856	LSG1	99	60.940	Cavia_aperea
ENSTRUG00000017380	lsg1	99	62.232	ENSCCAG00000035744	LSG1	97	62.637	Cebus_capucinus
ENSTRUG00000017380	lsg1	99	59.909	ENSCATG00000042060	LSG1	97	60.592	Cercocebus_atys
ENSTRUG00000017380	lsg1	99	59.939	ENSCSAG00000008796	LSG1	89	61.466	Chlorocebus_sabaeus
ENSTRUG00000017380	lsg1	100	60.299	ENSCPBG00000015941	LSG1	82	61.692	Chrysemys_picta_bellii
ENSTRUG00000017380	lsg1	72	51.406	ENSCING00000007079	-	88	54.884	Ciona_intestinalis
ENSTRUG00000017380	lsg1	79	54.217	ENSCSAVG00000002514	-	92	57.209	Ciona_savignyi
ENSTRUG00000017380	lsg1	99	59.909	ENSCANG00000030709	LSG1	97	61.310	Colobus_angolensis_palliatus
ENSTRUG00000017380	lsg1	99	62.303	ENSCGRG00001019846	Lsg1	97	63.107	Cricetulus_griseus_chok1gshd
ENSTRUG00000017380	lsg1	99	60.769	ENSCGRG00000014617	Lsg1	97	61.356	Cricetulus_griseus_crigri
ENSTRUG00000017380	lsg1	98	72.583	ENSCSEG00000008522	lsg1	97	72.452	Cynoglossus_semilaevis
ENSTRUG00000017380	lsg1	97	72.917	ENSCVAG00000002484	lsg1	97	73.878	Cyprinodon_variegatus
ENSTRUG00000017380	lsg1	100	67.674	ENSDARG00000015352	lsg1	97	68.938	Danio_rerio
ENSTRUG00000017380	lsg1	99	60.030	ENSDNOG00000006224	LSG1	97	60.998	Dasypus_novemcinctus
ENSTRUG00000017380	lsg1	99	47.567	FBgn0266284	Ns3	97	46.935	Drosophila_melanogaster
ENSTRUG00000017380	lsg1	87	72.000	ENSETEG00000003888	LSG1	87	76.271	Echinops_telfairi
ENSTRUG00000017380	lsg1	87	51.939	ENSEBUG00000003119	lsg1	85	51.433	Eptatretus_burgeri
ENSTRUG00000017380	lsg1	99	60.149	ENSEASG00005000678	LSG1	97	61.051	Equus_asinus_asinus
ENSTRUG00000017380	lsg1	99	60.000	ENSECAG00000017659	LSG1	97	60.896	Equus_caballus
ENSTRUG00000017380	lsg1	90	59.829	ENSEEUG00000015217	LSG1	75	59.829	Erinaceus_europaeus
ENSTRUG00000017380	lsg1	100	68.175	ENSELUG00000023973	lsg1	98	68.480	Esox_lucius
ENSTRUG00000017380	lsg1	100	60.091	ENSFCAG00000024957	LSG1	98	61.300	Felis_catus
ENSTRUG00000017380	lsg1	92	59.319	ENSFALG00000007210	LSG1	94	58.796	Ficedula_albicollis
ENSTRUG00000017380	lsg1	99	61.154	ENSFDAG00000017373	LSG1	97	60.218	Fukomys_damarensis
ENSTRUG00000017380	lsg1	97	75.689	ENSFHEG00000003680	lsg1	97	75.689	Fundulus_heteroclitus
ENSTRUG00000017380	lsg1	87	80.658	ENSGMOG00000015834	lsg1	87	80.833	Gadus_morhua
ENSTRUG00000017380	lsg1	99	57.721	ENSGALG00000007058	LSG1	84	58.228	Gallus_gallus
ENSTRUG00000017380	lsg1	97	76.672	ENSGAFG00000015831	lsg1	97	76.672	Gambusia_affinis
ENSTRUG00000017380	lsg1	98	74.240	ENSGACG00000009323	lsg1	97	74.277	Gasterosteus_aculeatus
ENSTRUG00000017380	lsg1	99	61.187	ENSGGOG00000000520	LSG1	97	61.934	Gorilla_gorilla
ENSTRUG00000017380	lsg1	100	76.899	ENSHBUG00000005659	lsg1	98	76.630	Haplochromis_burtoni
ENSTRUG00000017380	lsg1	99	59.380	ENSHGLG00000017390	LSG1	97	59.618	Heterocephalus_glaber_female
ENSTRUG00000017380	lsg1	99	59.380	ENSHGLG00100018587	LSG1	97	59.618	Heterocephalus_glaber_male
ENSTRUG00000017380	lsg1	97	73.482	ENSHCOG00000016848	lsg1	97	73.482	Hippocampus_comes
ENSTRUG00000017380	lsg1	100	69.716	ENSIPUG00000008631	lsg1	97	69.677	Ictalurus_punctatus
ENSTRUG00000017380	lsg1	74	55.061	ENSSTOG00000010234	LSG1	92	55.960	Ictidomys_tridecemlineatus
ENSTRUG00000017380	lsg1	99	61.927	ENSJJAG00000015513	Lsg1	97	61.778	Jaculus_jaculus
ENSTRUG00000017380	lsg1	98	74.879	ENSKMAG00000009681	lsg1	97	74.920	Kryptolebias_marmoratus
ENSTRUG00000017380	lsg1	98	76.575	ENSLBEG00000024261	lsg1	97	76.623	Labrus_bergylta
ENSTRUG00000017380	lsg1	100	61.437	ENSLACG00000013399	LSG1	98	61.712	Latimeria_chalumnae
ENSTRUG00000017380	lsg1	98	66.460	ENSLOCG00000004918	lsg1	97	67.241	Lepisosteus_oculatus
ENSTRUG00000017380	lsg1	99	61.043	ENSLAFG00000012919	-	97	62.758	Loxodonta_africana
ENSTRUG00000017380	lsg1	99	59.788	ENSMFAG00000039903	LSG1	97	60.436	Macaca_fascicularis
ENSTRUG00000017380	lsg1	99	59.788	ENSMMUG00000010708	LSG1	97	61.310	Macaca_mulatta
ENSTRUG00000017380	lsg1	99	59.788	ENSMNEG00000031538	LSG1	97	60.374	Macaca_nemestrina
ENSTRUG00000017380	lsg1	99	59.636	ENSMLEG00000041184	LSG1	97	61.154	Mandrillus_leucophaeus
ENSTRUG00000017380	lsg1	100	74.295	ENSMAMG00000000470	lsg1	98	74.277	Mastacembelus_armatus
ENSTRUG00000017380	lsg1	100	76.899	ENSMZEG00005017865	lsg1	98	76.630	Maylandia_zebra
ENSTRUG00000017380	lsg1	88	58.883	ENSMGAG00000007050	LSG1	99	59.153	Meleagris_gallopavo
ENSTRUG00000017380	lsg1	90	61.525	ENSMAUG00000016976	Lsg1	90	62.433	Mesocricetus_auratus
ENSTRUG00000017380	lsg1	99	60.334	ENSMICG00000049087	LSG1	97	60.280	Microcebus_murinus
ENSTRUG00000017380	lsg1	99	59.695	ENSMOCG00000022136	Lsg1	97	62.145	Microtus_ochrogaster
ENSTRUG00000017380	lsg1	98	74.757	ENSMMOG00000008884	lsg1	97	75.610	Mola_mola
ENSTRUG00000017380	lsg1	99	53.096	ENSMODG00000019828	LSG1	98	52.665	Monodelphis_domestica
ENSTRUG00000017380	lsg1	100	62.133	MGP_CAROLIEiJ_G0020648	Lsg1	98	62.599	Mus_caroli
ENSTRUG00000017380	lsg1	100	61.360	ENSMUSG00000022538	Lsg1	98	61.905	Mus_musculus
ENSTRUG00000017380	lsg1	98	61.562	MGP_PahariEiJ_G0016352	Lsg1	97	61.417	Mus_pahari
ENSTRUG00000017380	lsg1	100	61.824	MGP_SPRETEiJ_G0021544	Lsg1	98	62.124	Mus_spretus
ENSTRUG00000017380	lsg1	100	60.332	ENSMPUG00000003734	LSG1	98	60.000	Mustela_putorius_furo
ENSTRUG00000017380	lsg1	100	60.329	ENSMLUG00000012548	LSG1	98	60.429	Myotis_lucifugus
ENSTRUG00000017380	lsg1	99	62.090	ENSNGAG00000021872	Lsg1	97	62.880	Nannospalax_galili
ENSTRUG00000017380	lsg1	99	61.187	ENSNLEG00000008293	LSG1	97	61.778	Nomascus_leucogenys
ENSTRUG00000017380	lsg1	67	70.103	ENSMEUG00000009041	-	84	70.103	Notamacropus_eugenii
ENSTRUG00000017380	lsg1	100	75.730	ENSONIG00000002635	lsg1	98	75.906	Oreochromis_niloticus
ENSTRUG00000017380	lsg1	95	61.905	ENSOANG00000012742	LSG1	99	61.746	Ornithorhynchus_anatinus
ENSTRUG00000017380	lsg1	99	60.207	ENSOCUG00000004817	LSG1	97	62.229	Oryctolagus_cuniculus
ENSTRUG00000017380	lsg1	98	74.152	ENSORLG00000007695	lsg1	97	74.959	Oryzias_latipes
ENSTRUG00000017380	lsg1	98	74.475	ENSORLG00020016286	lsg1	97	74.675	Oryzias_latipes_hni
ENSTRUG00000017380	lsg1	98	75.163	ENSORLG00015012025	lsg1	97	75.246	Oryzias_latipes_hsok
ENSTRUG00000017380	lsg1	98	72.552	ENSOMEG00000022379	lsg1	97	72.742	Oryzias_melastigma
ENSTRUG00000017380	lsg1	99	59.851	ENSOGAG00000003475	LSG1	97	60.245	Otolemur_garnettii
ENSTRUG00000017380	lsg1	100	61.162	ENSOARG00000020403	LSG1	98	61.742	Ovis_aries
ENSTRUG00000017380	lsg1	99	61.492	ENSPPAG00000029271	LSG1	97	61.778	Pan_paniscus
ENSTRUG00000017380	lsg1	100	59.159	ENSPPRG00000010281	LSG1	98	60.031	Panthera_pardus
ENSTRUG00000017380	lsg1	100	60.091	ENSPTIG00000010789	LSG1	98	60.991	Panthera_tigris_altaica
ENSTRUG00000017380	lsg1	99	61.339	ENSPTRG00000015760	LSG1	97	61.622	Pan_troglodytes
ENSTRUG00000017380	lsg1	99	59.636	ENSPANG00000018249	LSG1	97	60.280	Papio_anubis
ENSTRUG00000017380	lsg1	99	66.147	ENSPKIG00000002895	lsg1	97	65.605	Paramormyrops_kingsleyae
ENSTRUG00000017380	lsg1	95	57.764	ENSPSIG00000009821	LSG1	99	57.764	Pelodiscus_sinensis
ENSTRUG00000017380	lsg1	95	72.471	ENSPMGG00000000931	lsg1	100	72.471	Periophthalmus_magnuspinnatus
ENSTRUG00000017380	lsg1	99	60.976	ENSPEMG00000012082	-	97	61.406	Peromyscus_maniculatus_bairdii
ENSTRUG00000017380	lsg1	99	56.112	ENSPMAG00000007451	lsg1	98	55.891	Petromyzon_marinus
ENSTRUG00000017380	lsg1	98	67.081	ENSPCIG00000013890	LSG1	75	67.081	Phascolarctos_cinereus
ENSTRUG00000017380	lsg1	97	74.116	ENSPFOG00000021882	lsg1	97	74.116	Poecilia_formosa
ENSTRUG00000017380	lsg1	97	74.838	ENSPLAG00000019536	lsg1	97	74.838	Poecilia_latipinna
ENSTRUG00000017380	lsg1	97	73.077	ENSPMEG00000017281	lsg1	97	73.077	Poecilia_mexicana
ENSTRUG00000017380	lsg1	97	68.637	ENSPREG00000006048	lsg1	97	68.966	Poecilia_reticulata
ENSTRUG00000017380	lsg1	92	60.165	ENSPPYG00000014425	LSG1	97	60.441	Pongo_abelii
ENSTRUG00000017380	lsg1	89	72.000	ENSPCAG00000005511	LSG1	79	74.576	Procavia_capensis
ENSTRUG00000017380	lsg1	99	59.969	ENSPCOG00000012360	LSG1	97	61.346	Propithecus_coquereli
ENSTRUG00000017380	lsg1	100	75.994	ENSPNYG00000021994	lsg1	98	75.705	Pundamilia_nyererei
ENSTRUG00000017380	lsg1	100	70.515	ENSPNAG00000015533	lsg1	98	70.560	Pygocentrus_nattereri
ENSTRUG00000017380	lsg1	100	60.426	ENSRNOG00000001727	Lsg1	98	61.315	Rattus_norvegicus
ENSTRUG00000017380	lsg1	99	60.671	ENSRBIG00000029053	LSG1	97	60.312	Rhinopithecus_bieti
ENSTRUG00000017380	lsg1	99	60.671	ENSRROG00000037702	LSG1	97	60.312	Rhinopithecus_roxellana
ENSTRUG00000017380	lsg1	82	39.154	YGL099W	LSG1	71	40.117	Saccharomyces_cerevisiae
ENSTRUG00000017380	lsg1	99	60.514	ENSSBOG00000034938	LSG1	97	62.402	Saimiri_boliviensis_boliviensis
ENSTRUG00000017380	lsg1	76	56.762	ENSSHAG00000003487	LSG1	100	56.952	Sarcophilus_harrisii
ENSTRUG00000017380	lsg1	98	67.994	ENSSFOG00015008955	lsg1	97	68.320	Scleropages_formosus
ENSTRUG00000017380	lsg1	98	76.341	ENSSDUG00000004622	lsg1	98	76.228	Seriola_dumerili
ENSTRUG00000017380	lsg1	98	76.190	ENSSLDG00000010869	lsg1	97	76.077	Seriola_lalandi_dorsalis
ENSTRUG00000017380	lsg1	81	59.706	ENSSARG00000012981	LSG1	72	70.435	Sorex_araneus
ENSTRUG00000017380	lsg1	100	61.374	ENSSPUG00000016347	LSG1	97	60.815	Sphenodon_punctatus
ENSTRUG00000017380	lsg1	100	75.199	ENSSPAG00000005508	lsg1	98	76.509	Stegastes_partitus
ENSTRUG00000017380	lsg1	100	58.931	ENSSSCG00000011827	LSG1	98	58.978	Sus_scrofa
ENSTRUG00000017380	lsg1	88	56.956	ENSTGUG00000009068	LSG1	100	57.213	Taeniopygia_guttata
ENSTRUG00000017380	lsg1	97	81.429	ENSTNIG00000015570	lsg1	97	82.820	Tetraodon_nigroviridis
ENSTRUG00000017380	lsg1	91	66.667	ENSTTRG00000000559	LSG1	89	66.667	Tursiops_truncatus
ENSTRUG00000017380	lsg1	100	60.241	ENSUAMG00000012454	LSG1	98	60.648	Ursus_americanus
ENSTRUG00000017380	lsg1	100	60.241	ENSUMAG00000000855	LSG1	98	60.648	Ursus_maritimus
ENSTRUG00000017380	lsg1	95	57.278	ENSVPAG00000012400	LSG1	100	57.346	Vicugna_pacos
ENSTRUG00000017380	lsg1	95	61.958	ENSVVUG00000008956	LSG1	97	61.477	Vulpes_vulpes
ENSTRUG00000017380	lsg1	100	63.037	ENSXETG00000003451	lsg1	98	61.732	Xenopus_tropicalis
ENSTRUG00000017380	lsg1	97	75.890	ENSXCOG00000003239	lsg1	97	75.890	Xiphophorus_couchianus
ENSTRUG00000017380	lsg1	97	74.757	ENSXMAG00000005536	lsg1	97	75.041	Xiphophorus_maculatus