EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017551 (Gene tree)
Gene ID: 101076510
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6454 bases
Position: chr13:15284961-15291414
Accession: 101076510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000044986	tRNA_anti-codon	PF01336.25	5.1e-14	1	1
ENSTRUP00000044985	tRNA_anti-codon	PF01336.25	5.4e-14	1	1
ENSTRUP00000044986	tRNA-synt_2	PF00152.20	1.3e-80	1	1
ENSTRUP00000044985	tRNA-synt_2	PF00152.20	8.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045138	-	2602	XM_011610263	ENSTRUP00000044986	595 (aa)	XP_011608565	H2V6Z7
ENSTRUT00000045137	-	3321	XM_003969970	ENSTRUP00000044985	590 (aa)	XP_003970019	H2V6Z6

Gene Model

Click here to download ENSTRUG00000017551's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017551	kars	99	75.574	ENSG00000065427	KARS	100	89.216	Homo_sapiens
ENSTRUG00000017551	kars	100	83.416	ENSAPOG00000010997	kars	100	83.914	Acanthochromis_polyacanthus
ENSTRUG00000017551	kars	99	75.410	ENSAMEG00000005347	KARS	97	75.410	Ailuropoda_melanoleuca
ENSTRUG00000017551	kars	100	79.310	ENSACIG00000000304	kars	98	82.771	Amphilophus_citrinellus
ENSTRUG00000017551	kars	97	84.746	ENSAOCG00000012971	kars	97	86.894	Amphiprion_ocellaris
ENSTRUG00000017551	kars	100	84.590	ENSAPEG00000011144	kars	100	85.082	Amphiprion_percula
ENSTRUG00000017551	kars	100	82.951	ENSATEG00000004954	kars	100	82.951	Anabas_testudineus
ENSTRUG00000017551	kars	91	78.650	ENSAPLG00000012705	KARS	99	78.650	Anas_platyrhynchos
ENSTRUG00000017551	kars	93	77.352	ENSACAG00000007577	KARS	90	77.526	Anolis_carolinensis
ENSTRUG00000017551	kars	97	63.500	ENSANAG00000031739	-	88	66.007	Aotus_nancymaae
ENSTRUG00000017551	kars	99	75.410	ENSANAG00000030403	-	97	78.066	Aotus_nancymaae
ENSTRUG00000017551	kars	100	86.281	ENSACLG00000001613	kars	100	86.281	Astatotilapia_calliptera
ENSTRUG00000017551	kars	100	82.043	ENSAMXG00000030719	kars	98	84.779	Astyanax_mexicanus
ENSTRUG00000017551	kars	93	79.685	ENSBTAG00000015677	KARS	73	79.685	Bos_taurus
ENSTRUG00000017551	kars	91	60.550	WBGene00002238	kars-1	97	63.727	Caenorhabditis_elegans
ENSTRUG00000017551	kars	99	75.902	ENSCJAG00000014213	KARS	97	78.584	Callithrix_jacchus
ENSTRUG00000017551	kars	99	76.129	ENSCAFG00000020069	KARS	99	76.129	Canis_familiaris
ENSTRUG00000017551	kars	99	76.129	ENSCAFG00020001721	KARS	99	76.129	Canis_lupus_dingo
ENSTRUG00000017551	kars	93	79.510	ENSCHIG00000014108	-	96	79.510	Capra_hircus
ENSTRUG00000017551	kars	92	77.817	ENSCHIG00000016073	-	88	80.608	Capra_hircus
ENSTRUG00000017551	kars	94	79.545	ENSTSYG00000001643	KARS	97	80.462	Carlito_syrichta
ENSTRUG00000017551	kars	99	69.707	ENSCAPG00000016234	KARS	98	69.707	Cavia_aperea
ENSTRUG00000017551	kars	99	75.570	ENSCPOG00000012036	KARS	99	76.570	Cavia_porcellus
ENSTRUG00000017551	kars	92	62.700	ENSCCAG00000030337	-	99	64.652	Cebus_capucinus
ENSTRUG00000017551	kars	99	75.574	ENSCCAG00000034307	-	97	78.238	Cebus_capucinus
ENSTRUG00000017551	kars	95	77.133	ENSCATG00000038129	KARS	94	79.242	Cercocebus_atys
ENSTRUG00000017551	kars	99	76.159	ENSCLAG00000007905	KARS	94	79.570	Chinchilla_lanigera
ENSTRUG00000017551	kars	93	78.345	ENSCSAG00000003664	KARS	91	78.345	Chlorocebus_sabaeus
ENSTRUG00000017551	kars	77	83.151	ENSCHOG00000013447	KARS	73	83.151	Choloepus_hoffmanni
ENSTRUG00000017551	kars	89	71.267	ENSCPBG00000002553	-	94	72.340	Chrysemys_picta_bellii
ENSTRUG00000017551	kars	93	79.510	ENSCPBG00000026969	KARS	96	79.510	Chrysemys_picta_bellii
ENSTRUG00000017551	kars	91	69.510	ENSCING00000009513	-	96	68.659	Ciona_intestinalis
ENSTRUG00000017551	kars	91	70.578	ENSCSAVG00000007684	-	96	69.314	Ciona_savignyi
ENSTRUG00000017551	kars	54	71.739	ENSCSAVG00000001136	-	100	71.648	Ciona_savignyi
ENSTRUG00000017551	kars	93	74.561	ENSCANG00000032813	KARS	95	74.690	Colobus_angolensis_palliatus
ENSTRUG00000017551	kars	92	80.496	ENSCGRG00001004055	KARS	93	80.431	Cricetulus_griseus_chok1gshd
ENSTRUG00000017551	kars	92	80.496	ENSCGRG00000014242	KARS	93	80.431	Cricetulus_griseus_crigri
ENSTRUG00000017551	kars	99	84.868	ENSCSEG00000008324	kars	97	87.211	Cynoglossus_semilaevis
ENSTRUG00000017551	kars	99	82.072	ENSCVAG00000019686	kars	100	83.553	Cyprinodon_variegatus
ENSTRUG00000017551	kars	100	80.528	ENSDARG00000103799	kars	99	87.379	Danio_rerio
ENSTRUG00000017551	kars	99	75.574	ENSDNOG00000002241	KARS	97	75.574	Dasypus_novemcinctus
ENSTRUG00000017551	kars	92	62.274	ENSDORG00000024214	-	95	62.274	Dipodomys_ordii
ENSTRUG00000017551	kars	99	74.548	ENSDORG00000004780	-	97	77.951	Dipodomys_ordii
ENSTRUG00000017551	kars	92	70.324	FBgn0027084	LysRS	97	70.504	Drosophila_melanogaster
ENSTRUG00000017551	kars	93	78.720	ENSETEG00000008353	KARS	92	78.720	Echinops_telfairi
ENSTRUG00000017551	kars	92	73.118	ENSEBUG00000001284	-	95	72.043	Eptatretus_burgeri
ENSTRUG00000017551	kars	93	79.613	ENSEASG00005013497	KARS	95	79.613	Equus_asinus_asinus
ENSTRUG00000017551	kars	93	79.613	ENSECAG00000013424	KARS	95	79.613	Equus_caballus
ENSTRUG00000017551	kars	98	70.549	ENSEEUG00000007042	KARS	98	69.722	Erinaceus_europaeus
ENSTRUG00000017551	kars	93	75.887	ENSELUG00000014575	kars	97	76.950	Esox_lucius
ENSTRUG00000017551	kars	99	76.860	ENSFCAG00000008573	KARS	97	78.793	Felis_catus
ENSTRUG00000017551	kars	93	79.965	ENSFALG00000002543	KARS	97	79.965	Ficedula_albicollis
ENSTRUG00000017551	kars	99	76.198	ENSFDAG00000007155	KARS	99	75.763	Fukomys_damarensis
ENSTRUG00000017551	kars	100	82.266	ENSFHEG00000006172	kars	100	82.759	Fundulus_heteroclitus
ENSTRUG00000017551	kars	100	80.914	ENSGMOG00000002633	kars	99	80.914	Gadus_morhua
ENSTRUG00000017551	kars	93	79.335	ENSGALG00000000907	KARS	99	79.298	Gallus_gallus
ENSTRUG00000017551	kars	99	84.046	ENSGAFG00000017252	kars	98	86.323	Gambusia_affinis
ENSTRUG00000017551	kars	100	83.361	ENSGACG00000015749	kars	100	83.361	Gasterosteus_aculeatus
ENSTRUG00000017551	kars	88	71.293	ENSGAGG00000011960	-	96	72.638	Gopherus_agassizii
ENSTRUG00000017551	kars	93	79.860	ENSGAGG00000023836	KARS	100	76.020	Gopherus_agassizii
ENSTRUG00000017551	kars	99	75.410	ENSGGOG00000005515	KARS	97	78.066	Gorilla_gorilla
ENSTRUG00000017551	kars	100	86.281	ENSHBUG00000013619	kars	100	86.281	Haplochromis_burtoni
ENSTRUG00000017551	kars	97	67.627	ENSHGLG00000015235	-	99	67.627	Heterocephalus_glaber_female
ENSTRUG00000017551	kars	99	76.159	ENSHGLG00000011898	KARS	94	79.570	Heterocephalus_glaber_female
ENSTRUG00000017551	kars	97	61.345	ENSHGLG00000001298	-	99	61.345	Heterocephalus_glaber_female
ENSTRUG00000017551	kars	99	76.159	ENSHGLG00100012264	KARS	94	79.570	Heterocephalus_glaber_male
ENSTRUG00000017551	kars	97	61.176	ENSHGLG00100006466	-	99	61.176	Heterocephalus_glaber_male
ENSTRUG00000017551	kars	97	67.458	ENSHGLG00100012523	-	99	67.458	Heterocephalus_glaber_male
ENSTRUG00000017551	kars	93	86.195	ENSHCOG00000002900	kars	96	85.017	Hippocampus_comes
ENSTRUG00000017551	kars	100	83.498	ENSIPUG00000009862	kars	98	86.146	Ictalurus_punctatus
ENSTRUG00000017551	kars	97	76.102	ENSSTOG00000004205	KARS	99	76.102	Ictidomys_tridecemlineatus
ENSTRUG00000017551	kars	93	79.649	ENSJJAG00000020406	Kars	98	77.586	Jaculus_jaculus
ENSTRUG00000017551	kars	100	84.918	ENSKMAG00000006434	kars	100	84.918	Kryptolebias_marmoratus
ENSTRUG00000017551	kars	100	84.918	ENSLBEG00000026537	kars	100	84.918	Labrus_bergylta
ENSTRUG00000017551	kars	99	76.221	ENSLACG00000006667	KARS	99	76.059	Latimeria_chalumnae
ENSTRUG00000017551	kars	86	74.951	ENSLACG00000016399	-	99	74.951	Latimeria_chalumnae
ENSTRUG00000017551	kars	85	72.888	ENSLOCG00000013608	-	92	72.888	Lepisosteus_oculatus
ENSTRUG00000017551	kars	93	85.841	ENSLOCG00000004002	kars	97	85.841	Lepisosteus_oculatus
ENSTRUG00000017551	kars	93	78.459	ENSLAFG00000015340	KARS	92	78.459	Loxodonta_africana
ENSTRUG00000017551	kars	93	78.697	ENSMFAG00000040024	KARS	97	77.547	Macaca_fascicularis
ENSTRUG00000017551	kars	83	76.117	ENSMNEG00000035832	-	99	76.117	Macaca_nemestrina
ENSTRUG00000017551	kars	94	77.547	ENSMNEG00000042879	-	97	77.547	Macaca_nemestrina
ENSTRUG00000017551	kars	93	78.873	ENSMLEG00000034947	KARS	97	77.720	Mandrillus_leucophaeus
ENSTRUG00000017551	kars	100	86.066	ENSMAMG00000021559	kars	100	86.066	Mastacembelus_armatus
ENSTRUG00000017551	kars	100	86.281	ENSMZEG00005014382	kars	100	86.281	Maylandia_zebra
ENSTRUG00000017551	kars	91	79.673	ENSMGAG00000009000	KARS	98	79.673	Meleagris_gallopavo
ENSTRUG00000017551	kars	99	75.935	ENSMICG00000011997	KARS	98	78.425	Microcebus_murinus
ENSTRUG00000017551	kars	92	78.114	ENSMOCG00000019029	-	94	77.738	Microtus_ochrogaster
ENSTRUG00000017551	kars	92	80.605	ENSMOCG00000011829	Kars	95	80.605	Microtus_ochrogaster
ENSTRUG00000017551	kars	93	87.879	ENSMMOG00000016934	kars	100	87.879	Mola_mola
ENSTRUG00000017551	kars	93	78.092	ENSMODG00000002215	-	91	80.651	Monodelphis_domestica
ENSTRUG00000017551	kars	93	75.806	ENSMODG00000002238	-	88	77.674	Monodelphis_domestica
ENSTRUG00000017551	kars	100	83.607	ENSMALG00000020858	kars	100	83.607	Monopterus_albus
ENSTRUG00000017551	kars	93	79.319	MGP_CAROLIEiJ_G0031588	Kars	98	79.319	Mus_caroli
ENSTRUG00000017551	kars	99	77.162	ENSMUSG00000031948	Kars	94	81.329	Mus_musculus
ENSTRUG00000017551	kars	93	80.736	MGP_PahariEiJ_G0023186	Kars	94	81.149	Mus_pahari
ENSTRUG00000017551	kars	99	77.325	MGP_SPRETEiJ_G0032706	Kars	94	81.508	Mus_spretus
ENSTRUG00000017551	kars	99	75.450	ENSMPUG00000009871	KARS	98	75.450	Mustela_putorius_furo
ENSTRUG00000017551	kars	80	52.646	ENSMLUG00000026871	-	76	52.646	Myotis_lucifugus
ENSTRUG00000017551	kars	99	75.285	ENSMLUG00000015119	-	98	77.436	Myotis_lucifugus
ENSTRUG00000017551	kars	92	79.032	ENSNGAG00000022944	-	96	79.032	Nannospalax_galili
ENSTRUG00000017551	kars	93	79.756	ENSNGAG00000018820	-	96	79.756	Nannospalax_galili
ENSTRUG00000017551	kars	93	88.277	ENSNBRG00000011098	kars	96	88.277	Neolamprologus_brichardi
ENSTRUG00000017551	kars	93	79.049	ENSNLEG00000013072	KARS	97	77.893	Nomascus_leucogenys
ENSTRUG00000017551	kars	96	75.517	ENSMEUG00000008684	KARS	95	75.000	Notamacropus_eugenii
ENSTRUG00000017551	kars	93	78.883	ENSOPRG00000012544	KARS	86	81.784	Ochotona_princeps
ENSTRUG00000017551	kars	92	57.942	ENSODEG00000009464	-	94	57.914	Octodon_degus
ENSTRUG00000017551	kars	99	76.694	ENSODEG00000013099	-	97	78.646	Octodon_degus
ENSTRUG00000017551	kars	93	86.348	ENSONIG00000005937	kars	97	87.744	Oreochromis_niloticus
ENSTRUG00000017551	kars	91	80.360	ENSOANG00000008179	KARS	86	83.203	Ornithorhynchus_anatinus
ENSTRUG00000017551	kars	92	74.194	ENSOCUG00000015553	KARS	93	74.194	Oryctolagus_cuniculus
ENSTRUG00000017551	kars	99	82.072	ENSORLG00000007627	kars	99	83.059	Oryzias_latipes
ENSTRUG00000017551	kars	99	82.566	ENSORLG00020010056	kars	99	83.224	Oryzias_latipes_hni
ENSTRUG00000017551	kars	99	82.072	ENSORLG00015008179	kars	99	83.224	Oryzias_latipes_hsok
ENSTRUG00000017551	kars	99	82.730	ENSOMEG00000001710	kars	99	84.266	Oryzias_melastigma
ENSTRUG00000017551	kars	99	70.292	ENSOGAG00000005903	KARS	98	70.292	Otolemur_garnettii
ENSTRUG00000017551	kars	89	79.015	ENSOARG00000006928	KARS	96	79.015	Ovis_aries
ENSTRUG00000017551	kars	93	79.049	ENSPPAG00000036192	KARS	97	77.893	Pan_paniscus
ENSTRUG00000017551	kars	99	77.025	ENSPPRG00000003027	KARS	97	78.929	Panthera_pardus
ENSTRUG00000017551	kars	99	76.860	ENSPTIG00000008011	KARS	97	78.756	Panthera_tigris_altaica
ENSTRUG00000017551	kars	99	75.410	ENSPTRG00000008364	KARS	97	78.066	Pan_troglodytes
ENSTRUG00000017551	kars	95	77.133	ENSPANG00000024106	KARS	91	78.873	Papio_anubis
ENSTRUG00000017551	kars	100	79.836	ENSPKIG00000009896	kars	98	85.133	Paramormyrops_kingsleyae
ENSTRUG00000017551	kars	86	73.684	ENSPSIG00000003041	-	94	73.684	Pelodiscus_sinensis
ENSTRUG00000017551	kars	92	80.179	ENSPSIG00000009294	KARS	96	80.000	Pelodiscus_sinensis
ENSTRUG00000017551	kars	90	88.454	ENSPMGG00000006117	kars	94	90.440	Periophthalmus_magnuspinnatus
ENSTRUG00000017551	kars	99	75.974	ENSPEMG00000012277	Kars	94	80.108	Peromyscus_maniculatus_bairdii
ENSTRUG00000017551	kars	95	71.891	ENSPMAG00000008360	-	94	73.116	Petromyzon_marinus
ENSTRUG00000017551	kars	94	78.510	ENSPCIG00000010761	-	97	78.510	Phascolarctos_cinereus
ENSTRUG00000017551	kars	92	77.495	ENSPCIG00000025469	-	84	80.426	Phascolarctos_cinereus
ENSTRUG00000017551	kars	99	82.730	ENSPFOG00000013253	kars	99	84.211	Poecilia_formosa
ENSTRUG00000017551	kars	99	82.730	ENSPLAG00000004189	kars	98	86.146	Poecilia_latipinna
ENSTRUG00000017551	kars	99	82.895	ENSPMEG00000015698	kars	98	86.323	Poecilia_mexicana
ENSTRUG00000017551	kars	99	83.553	ENSPREG00000023179	kars	98	85.968	Poecilia_reticulata
ENSTRUG00000017551	kars	99	75.246	ENSPPYG00000007567	KARS	97	75.246	Pongo_abelii
ENSTRUG00000017551	kars	86	74.854	ENSPCAG00000010790	KARS	98	74.854	Procavia_capensis
ENSTRUG00000017551	kars	99	71.215	ENSPCOG00000003166	KARS	86	83.369	Propithecus_coquereli
ENSTRUG00000017551	kars	99	75.698	ENSPVAG00000006746	KARS	97	75.698	Pteropus_vampyrus
ENSTRUG00000017551	kars	100	86.281	ENSPNYG00000013095	kars	100	86.281	Pundamilia_nyererei
ENSTRUG00000017551	kars	100	82.923	ENSPNAG00000013828	kars	98	85.841	Pygocentrus_nattereri
ENSTRUG00000017551	kars	93	79.756	ENSRNOG00000019456	Kars	84	83.048	Rattus_norvegicus
ENSTRUG00000017551	kars	99	74.426	ENSRBIG00000030118	KARS	94	78.520	Rhinopithecus_bieti
ENSTRUG00000017551	kars	99	74.426	ENSRROG00000041418	KARS	94	78.520	Rhinopithecus_roxellana
ENSTRUG00000017551	kars	91	58.152	YDR037W	KRS1	93	58.152	Saccharomyces_cerevisiae
ENSTRUG00000017551	kars	79	33.068	YNL073W	-	86	33.400	Saccharomyces_cerevisiae
ENSTRUG00000017551	kars	99	75.325	ENSSBOG00000019255	KARS	98	77.949	Saimiri_boliviensis_boliviensis
ENSTRUG00000017551	kars	88	70.778	ENSSHAG00000009005	-	95	70.778	Sarcophilus_harrisii
ENSTRUG00000017551	kars	93	74.695	ENSSHAG00000001359	-	91	76.504	Sarcophilus_harrisii
ENSTRUG00000017551	kars	98	63.712	ENSSHAG00000002050	-	86	68.491	Sarcophilus_harrisii
ENSTRUG00000017551	kars	92	85.305	ENSSFOG00015014837	kars	95	87.170	Scleropages_formosus
ENSTRUG00000017551	kars	100	84.262	ENSSMAG00000021441	kars	100	85.902	Scophthalmus_maximus
ENSTRUG00000017551	kars	100	84.262	ENSSDUG00000001202	kars	100	85.738	Seriola_dumerili
ENSTRUG00000017551	kars	93	85.816	ENSSLDG00000021220	kars	98	87.411	Seriola_lalandi_dorsalis
ENSTRUG00000017551	kars	69	88.889	ENSSARG00000011493	KARS	70	86.806	Sorex_araneus
ENSTRUG00000017551	kars	93	78.201	ENSSPUG00000004974	KARS	97	78.201	Sphenodon_punctatus
ENSTRUG00000017551	kars	65	64.267	ENSSPUG00000000449	-	83	68.347	Sphenodon_punctatus
ENSTRUG00000017551	kars	100	84.590	ENSSPAG00000020365	kars	91	88.469	Stegastes_partitus
ENSTRUG00000017551	kars	99	75.777	ENSSSCG00000002704	KARS	97	78.448	Sus_scrofa
ENSTRUG00000017551	kars	92	80.287	ENSTGUG00000008400	KARS	99	80.287	Taeniopygia_guttata
ENSTRUG00000017551	kars	93	94.565	ENSTNIG00000009351	kars	97	94.565	Tetraodon_nigroviridis
ENSTRUG00000017551	kars	77	69.114	ENSTBEG00000004610	KARS	80	69.114	Tupaia_belangeri
ENSTRUG00000017551	kars	99	75.537	ENSTTRG00000001221	KARS	97	75.537	Tursiops_truncatus
ENSTRUG00000017551	kars	99	75.574	ENSUAMG00000017557	KARS	97	78.066	Ursus_americanus
ENSTRUG00000017551	kars	99	75.574	ENSUMAG00000014559	KARS	97	75.574	Ursus_maritimus
ENSTRUG00000017551	kars	99	73.650	ENSVPAG00000003716	KARS	98	73.650	Vicugna_pacos
ENSTRUG00000017551	kars	99	75.806	ENSVVUG00000024338	KARS	96	81.869	Vulpes_vulpes
ENSTRUG00000017551	kars	93	79.965	ENSXETG00000003569	kars	97	80.036	Xenopus_tropicalis
ENSTRUG00000017551	kars	92	86.918	ENSXCOG00000011313	kars	94	89.015	Xiphophorus_couchianus
ENSTRUG00000017551	kars	99	84.539	ENSXMAG00000003191	kars	98	86.856	Xiphophorus_maculatus