EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017592 (Gene tree)
Gene ID: 101070783
Gene Symbol: rrp1
Alias: Nop52|cb43|nnp1|sb:cb43|wu:fb37f12|wu:fi05d01
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3936 bases
Position: chrHE592027.1:20370-24305
Accession: 101070783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000045087	Nop52	PF05997.12	3.3e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045239	-	1222	XM_011617678	ENSTRUP00000045087	354 (aa)	XP_011615980	H2V798

Gene Model

Click here to download ENSTRUG00000017592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017592	rrp1	97	50.720	ENSG00000160214	RRP1	82	62.162	Homo_sapiens
ENSTRUG00000017592	rrp1	97	50.291	ENSAMEG00000011448	RRP1	75	50.291	Ailuropoda_melanoleuca
ENSTRUG00000017592	rrp1	81	62.414	ENSACIG00000019121	rrp1	57	62.414	Amphilophus_citrinellus
ENSTRUG00000017592	rrp1	100	66.102	ENSAOCG00000017894	-	77	66.384	Amphiprion_ocellaris
ENSTRUG00000017592	rrp1	94	51.488	ENSANAG00000037815	RRP1	75	52.083	Aotus_nancymaae
ENSTRUG00000017592	rrp1	56	72.500	ENSACLG00000010281	-	78	72.500	Astatotilapia_calliptera
ENSTRUG00000017592	rrp1	97	46.974	ENSBTAG00000003981	RRP1	75	48.127	Bos_taurus
ENSTRUG00000017592	rrp1	97	50.432	ENSCJAG00000043205	RRP1	70	50.432	Callithrix_jacchus
ENSTRUG00000017592	rrp1	97	48.864	ENSCAFG00000010646	RRP1	80	46.457	Canis_familiaris
ENSTRUG00000017592	rrp1	97	48.864	ENSCAFG00020018979	RRP1	75	49.148	Canis_lupus_dingo
ENSTRUG00000017592	rrp1	97	47.674	ENSCHIG00000020948	RRP1	76	47.965	Capra_hircus
ENSTRUG00000017592	rrp1	97	48.611	ENSTSYG00000012831	RRP1	77	48.611	Carlito_syrichta
ENSTRUG00000017592	rrp1	85	44.753	ENSCAPG00000008576	RRP1	81	45.062	Cavia_aperea
ENSTRUG00000017592	rrp1	97	47.688	ENSCPOG00000038986	RRP1	75	48.844	Cavia_porcellus
ENSTRUG00000017592	rrp1	99	44.068	ENSCCAG00000029384	RRP1B	53	44.068	Cebus_capucinus
ENSTRUG00000017592	rrp1	97	51.297	ENSCCAG00000029828	RRP1	74	51.297	Cebus_capucinus
ENSTRUG00000017592	rrp1	97	49.123	ENSCATG00000015632	RRP1	74	48.997	Cercocebus_atys
ENSTRUG00000017592	rrp1	97	47.953	ENSCLAG00000011639	RRP1	75	47.953	Chinchilla_lanigera
ENSTRUG00000017592	rrp1	91	50.153	ENSCSAG00000007936	RRP1	97	49.697	Chlorocebus_sabaeus
ENSTRUG00000017592	rrp1	94	37.725	ENSCHOG00000002426	-	54	37.725	Choloepus_hoffmanni
ENSTRUG00000017592	rrp1	98	34.463	ENSCING00000003304	-	75	34.463	Ciona_intestinalis
ENSTRUG00000017592	rrp1	84	48.525	ENSCANG00000042611	RRP1	70	48.525	Colobus_angolensis_palliatus
ENSTRUG00000017592	rrp1	97	50.867	ENSCGRG00001011920	Rrp1	77	50.867	Cricetulus_griseus_chok1gshd
ENSTRUG00000017592	rrp1	99	44.160	ENSCGRG00001023882	-	60	61.765	Cricetulus_griseus_chok1gshd
ENSTRUG00000017592	rrp1	97	50.867	ENSCGRG00000008915	Rrp1	77	50.867	Cricetulus_griseus_crigri
ENSTRUG00000017592	rrp1	100	63.305	ENSCSEG00000020711	-	66	63.305	Cynoglossus_semilaevis
ENSTRUG00000017592	rrp1	99	61.864	ENSCVAG00000017568	-	89	61.453	Cyprinodon_variegatus
ENSTRUG00000017592	rrp1	97	49.568	ENSDNOG00000019880	RRP1	75	49.568	Dasypus_novemcinctus
ENSTRUG00000017592	rrp1	86	45.806	ENSDORG00000002104	Rrp1	75	46.129	Dipodomys_ordii
ENSTRUG00000017592	rrp1	91	41.796	ENSETEG00000002963	-	71	42.945	Echinops_telfairi
ENSTRUG00000017592	rrp1	97	49.415	ENSEASG00005001673	RRP1	80	48.725	Equus_asinus_asinus
ENSTRUG00000017592	rrp1	97	50.292	ENSECAG00000015703	RRP1	77	51.020	Equus_caballus
ENSTRUG00000017592	rrp1	100	61.765	ENSELUG00000015885	-	91	57.971	Esox_lucius
ENSTRUG00000017592	rrp1	97	48.266	ENSFCAG00000008434	RRP1	75	49.711	Felis_catus
ENSTRUG00000017592	rrp1	96	47.801	ENSFDAG00000013728	RRP1	74	48.276	Fukomys_damarensis
ENSTRUG00000017592	rrp1	100	61.299	ENSGMOG00000001953	-	51	61.299	Gadus_morhua
ENSTRUG00000017592	rrp1	100	63.889	ENSGACG00000001438	rrp1	54	63.889	Gasterosteus_aculeatus
ENSTRUG00000017592	rrp1	97	51.009	ENSGGOG00000000173	RRP1	74	51.009	Gorilla_gorilla
ENSTRUG00000017592	rrp1	99	43.258	ENSHGLG00000004968	RRP1B	51	43.258	Heterocephalus_glaber_female
ENSTRUG00000017592	rrp1	96	48.824	ENSHGLG00000017085	RRP1	71	50.000	Heterocephalus_glaber_female
ENSTRUG00000017592	rrp1	96	57.865	ENSIPUG00000000673	-	67	58.192	Ictalurus_punctatus
ENSTRUG00000017592	rrp1	97	49.854	ENSSTOG00000011116	RRP1	77	49.854	Ictidomys_tridecemlineatus
ENSTRUG00000017592	rrp1	97	50.585	ENSJJAG00000018886	Rrp1	76	50.585	Jaculus_jaculus
ENSTRUG00000017592	rrp1	97	63.944	ENSKMAG00000005539	rrp1	54	65.123	Kryptolebias_marmoratus
ENSTRUG00000017592	rrp1	99	65.565	ENSLBEG00000021417	RRP1	91	68.132	Labrus_bergylta
ENSTRUG00000017592	rrp1	97	49.003	ENSLAFG00000022901	RRP1	78	49.003	Loxodonta_africana
ENSTRUG00000017592	rrp1	99	44.507	ENSLAFG00000000766	RRP1B	83	44.507	Loxodonta_africana
ENSTRUG00000017592	rrp1	97	49.711	ENSMFAG00000003202	RRP1	74	49.284	Macaca_fascicularis
ENSTRUG00000017592	rrp1	97	50.000	ENSMMUG00000012304	RRP1	74	50.000	Macaca_mulatta
ENSTRUG00000017592	rrp1	97	49.711	ENSMNEG00000031210	RRP1	74	49.711	Macaca_nemestrina
ENSTRUG00000017592	rrp1	88	48.889	ENSMLEG00000037797	RRP1	73	48.428	Mandrillus_leucophaeus
ENSTRUG00000017592	rrp1	97	42.693	ENSMAUG00000017653	Rrp1	74	44.986	Mesocricetus_auratus
ENSTRUG00000017592	rrp1	97	50.435	ENSMICG00000004700	RRP1	78	50.435	Microcebus_murinus
ENSTRUG00000017592	rrp1	76	63.889	ENSMOCG00000015687	Rrp1	77	43.548	Microtus_ochrogaster
ENSTRUG00000017592	rrp1	100	63.231	ENSMMOG00000019175	rrp1	90	64.706	Mola_mola
ENSTRUG00000017592	rrp1	95	49.854	ENSMODG00000021036	-	50	49.854	Monodelphis_domestica
ENSTRUG00000017592	rrp1	100	66.574	ENSMALG00000010310	rrp1	91	66.574	Monopterus_albus
ENSTRUG00000017592	rrp1	95	42.690	MGP_CAROLIEiJ_G0021376	Rrp1b	58	57.971	Mus_caroli
ENSTRUG00000017592	rrp1	97	53.036	MGP_CAROLIEiJ_G0015508	Rrp1	80	43.434	Mus_caroli
ENSTRUG00000017592	rrp1	95	42.398	ENSMUSG00000058392	Rrp1b	58	59.420	Mus_musculus
ENSTRUG00000017592	rrp1	97	44.332	ENSMUSG00000061032	Rrp1	80	45.202	Mus_musculus
ENSTRUG00000017592	rrp1	92	53.441	MGP_PahariEiJ_G0030921	Rrp1	80	43.467	Mus_pahari
ENSTRUG00000017592	rrp1	99	42.450	MGP_PahariEiJ_G0023695	Rrp1b	58	58.824	Mus_pahari
ENSTRUG00000017592	rrp1	85	57.627	MGP_SPRETEiJ_G0016321	Rrp1	80	44.192	Mus_spretus
ENSTRUG00000017592	rrp1	99	42.179	MGP_SPRETEiJ_G0022290	Rrp1b	58	59.420	Mus_spretus
ENSTRUG00000017592	rrp1	97	45.408	ENSMPUG00000009826	RRP1	80	45.918	Mustela_putorius_furo
ENSTRUG00000017592	rrp1	79	55.656	ENSMLUG00000017788	RRP1	78	45.293	Myotis_lucifugus
ENSTRUG00000017592	rrp1	97	39.950	ENSNGAG00000022344	Rrp1	80	40.102	Nannospalax_galili
ENSTRUG00000017592	rrp1	56	70.098	ENSNBRG00000021980	-	55	67.431	Neolamprologus_brichardi
ENSTRUG00000017592	rrp1	97	51.009	ENSNLEG00000034734	RRP1	74	51.009	Nomascus_leucogenys
ENSTRUG00000017592	rrp1	96	43.988	ENSOPRG00000001319	RRP1	92	44.575	Ochotona_princeps
ENSTRUG00000017592	rrp1	97	46.356	ENSOANG00000006472	-	99	43.666	Ornithorhynchus_anatinus
ENSTRUG00000017592	rrp1	59	56.061	ENSOCUG00000022843	-	51	56.061	Oryctolagus_cuniculus
ENSTRUG00000017592	rrp1	99	43.466	ENSOGAG00000009872	RRP1B	53	43.466	Otolemur_garnettii
ENSTRUG00000017592	rrp1	97	51.304	ENSOGAG00000006105	RRP1	77	51.884	Otolemur_garnettii
ENSTRUG00000017592	rrp1	91	48.297	ENSOARG00000011434	RRP1	72	48.308	Ovis_aries
ENSTRUG00000017592	rrp1	97	50.720	ENSPPAG00000029050	RRP1	74	50.720	Pan_paniscus
ENSTRUG00000017592	rrp1	97	48.555	ENSPPRG00000010656	RRP1	76	50.000	Panthera_pardus
ENSTRUG00000017592	rrp1	88	40.952	ENSPTIG00000016894	RRP1B	52	40.952	Panthera_tigris_altaica
ENSTRUG00000017592	rrp1	87	44.337	ENSPTIG00000019473	RRP1	70	44.337	Panthera_tigris_altaica
ENSTRUG00000017592	rrp1	97	51.009	ENSPTRG00000013962	RRP1	74	51.009	Pan_troglodytes
ENSTRUG00000017592	rrp1	97	48.718	ENSPANG00000015097	RRP1	74	50.000	Papio_anubis
ENSTRUG00000017592	rrp1	100	48.509	ENSPMGG00000007512	-	87	48.780	Periophthalmus_magnuspinnatus
ENSTRUG00000017592	rrp1	97	49.429	ENSPEMG00000018421	Rrp1	77	49.429	Peromyscus_maniculatus_bairdii
ENSTRUG00000017592	rrp1	98	49.284	ENSPCIG00000015523	-	75	49.284	Phascolarctos_cinereus
ENSTRUG00000017592	rrp1	100	64.045	ENSPLAG00000016684	-	51	65.363	Poecilia_latipinna
ENSTRUG00000017592	rrp1	97	50.432	ENSPPYG00000011474	RRP1	74	50.432	Pongo_abelii
ENSTRUG00000017592	rrp1	64	44.889	ENSPCAG00000008370	-	68	44.400	Procavia_capensis
ENSTRUG00000017592	rrp1	97	48.703	ENSPCOG00000017706	RRP1	77	48.703	Propithecus_coquereli
ENSTRUG00000017592	rrp1	97	48.256	ENSRNOG00000001203	Rrp1	78	49.570	Rattus_norvegicus
ENSTRUG00000017592	rrp1	97	49.300	ENSRBIG00000032082	RRP1	74	49.284	Rhinopithecus_bieti
ENSTRUG00000017592	rrp1	97	49.300	ENSRROG00000039799	RRP1	74	49.284	Rhinopithecus_roxellana
ENSTRUG00000017592	rrp1	99	44.915	ENSRROG00000031499	RRP1B	51	44.915	Rhinopithecus_roxellana
ENSTRUG00000017592	rrp1	97	51.014	ENSSBOG00000034689	RRP1	74	51.014	Saimiri_boliviensis_boliviensis
ENSTRUG00000017592	rrp1	85	49.508	ENSSHAG00000010304	-	92	49.338	Sarcophilus_harrisii
ENSTRUG00000017592	rrp1	91	52.059	ENSSFOG00015003932	-	52	52.059	Scleropages_formosus
ENSTRUG00000017592	rrp1	100	70.330	ENSSMAG00000016847	-	85	66.391	Scophthalmus_maximus
ENSTRUG00000017592	rrp1	97	49.123	ENSSSCG00000037061	RRP1	76	50.000	Sus_scrofa
ENSTRUG00000017592	rrp1	99	44.258	ENSSSCG00000021698	RRP1B	54	44.258	Sus_scrofa
ENSTRUG00000017592	rrp1	100	75.630	ENSTNIG00000005053	rrp1	56	75.623	Tetraodon_nigroviridis
ENSTRUG00000017592	rrp1	88	44.586	ENSTBEG00000000422	RRP1B	54	44.586	Tupaia_belangeri
ENSTRUG00000017592	rrp1	72	50.847	ENSTTRG00000011162	RRP1	57	50.847	Tursiops_truncatus
ENSTRUG00000017592	rrp1	65	43.590	ENSUAMG00000014189	-	67	43.590	Ursus_americanus
ENSTRUG00000017592	rrp1	99	43.785	ENSUAMG00000026765	RRP1B	51	43.785	Ursus_americanus
ENSTRUG00000017592	rrp1	86	48.701	ENSUMAG00000025507	RRP1	72	46.735	Ursus_maritimus
ENSTRUG00000017592	rrp1	88	42.492	ENSUMAG00000025510	RRP1B	60	42.492	Ursus_maritimus
ENSTRUG00000017592	rrp1	54	43.781	ENSVVUG00000024498	-	53	44.954	Vulpes_vulpes
ENSTRUG00000017592	rrp1	93	45.427	ENSXETG00000013683	rrp1b	50	46.646	Xenopus_tropicalis
ENSTRUG00000017592	rrp1	52	69.399	ENSXCOG00000008312	-	69	69.399	Xiphophorus_couchianus