EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017696 (Gene tree)
Gene ID: 101074901
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6102 bases
Position: chrHE591831.1:165809-171910
Accession: 101074901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000045352	B3_4	PF03483.17	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045504	-	4778	XM_003978474	ENSTRUP00000045352	552 (aa)	XP_003978523	H2V813

Gene Model

Click here to download ENSTRUG00000017696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017696	lrrc47	99	52.431	ENSG00000130764	LRRC47	99	52.860	Homo_sapiens
ENSTRUG00000017696	lrrc47	100	77.996	ENSAPOG00000019553	lrrc47	100	77.460	Acanthochromis_polyacanthus
ENSTRUG00000017696	lrrc47	76	57.639	ENSAMEG00000009152	LRRC47	94	57.870	Ailuropoda_melanoleuca
ENSTRUG00000017696	lrrc47	67	63.158	ENSAPLG00000003167	LRRC47	99	63.684	Anas_platyrhynchos
ENSTRUG00000017696	lrrc47	64	62.500	ENSACAG00000008267	LRRC47	97	62.431	Anolis_carolinensis
ENSTRUG00000017696	lrrc47	99	52.083	ENSANAG00000025576	LRRC47	99	52.686	Aotus_nancymaae
ENSTRUG00000017696	lrrc47	99	52.531	ENSBTAG00000004738	LRRC47	99	53.054	Bos_taurus
ENSTRUG00000017696	lrrc47	95	53.069	ENSCAFG00000019492	LRRC47	97	53.136	Canis_familiaris
ENSTRUG00000017696	lrrc47	99	53.147	ENSCAFG00020009667	LRRC47	99	53.497	Canis_lupus_dingo
ENSTRUG00000017696	lrrc47	99	53.333	ENSCHIG00000022607	LRRC47	98	53.860	Capra_hircus
ENSTRUG00000017696	lrrc47	95	52.252	ENSTSYG00000009326	LRRC47	97	53.641	Carlito_syrichta
ENSTRUG00000017696	lrrc47	65	59.358	ENSCAPG00000016517	LRRC47	99	59.467	Cavia_aperea
ENSTRUG00000017696	lrrc47	99	51.916	ENSCPOG00000014931	LRRC47	95	52.091	Cavia_porcellus
ENSTRUG00000017696	lrrc47	99	51.562	ENSCCAG00000024895	LRRC47	99	52.595	Cebus_capucinus
ENSTRUG00000017696	lrrc47	99	52.778	ENSCATG00000029337	LRRC47	99	53.553	Cercocebus_atys
ENSTRUG00000017696	lrrc47	99	52.189	ENSCLAG00000006093	LRRC47	99	51.839	Chinchilla_lanigera
ENSTRUG00000017696	lrrc47	99	52.951	ENSCSAG00000000727	LRRC47	99	53.726	Chlorocebus_sabaeus
ENSTRUG00000017696	lrrc47	99	50.590	ENSCPBG00000019404	LRRC47	99	51.010	Chrysemys_picta_bellii
ENSTRUG00000017696	lrrc47	79	55.895	ENSCANG00000030701	LRRC47	96	56.863	Colobus_angolensis_palliatus
ENSTRUG00000017696	lrrc47	99	52.539	ENSCGRG00001015159	Lrrc47	89	52.880	Cricetulus_griseus_chok1gshd
ENSTRUG00000017696	lrrc47	66	59.309	ENSCGRG00000017336	Lrrc47	97	61.264	Cricetulus_griseus_crigri
ENSTRUG00000017696	lrrc47	100	73.250	ENSCSEG00000006217	lrrc47	96	73.345	Cynoglossus_semilaevis
ENSTRUG00000017696	lrrc47	65	58.947	ENSDORG00000016594	Lrrc47	99	60.372	Dipodomys_ordii
ENSTRUG00000017696	lrrc47	98	53.180	ENSEASG00005021788	LRRC47	99	53.993	Equus_asinus_asinus
ENSTRUG00000017696	lrrc47	99	52.604	ENSECAG00000022472	LRRC47	89	53.819	Equus_caballus
ENSTRUG00000017696	lrrc47	100	67.549	ENSELUG00000017544	lrrc47	98	68.430	Esox_lucius
ENSTRUG00000017696	lrrc47	91	51.515	ENSFCAG00000011632	LRRC47	93	52.462	Felis_catus
ENSTRUG00000017696	lrrc47	70	62.725	ENSFALG00000009631	LRRC47	99	58.782	Ficedula_albicollis
ENSTRUG00000017696	lrrc47	100	65.241	ENSGMOG00000015674	lrrc47	99	65.954	Gadus_morhua
ENSTRUG00000017696	lrrc47	99	50.887	ENSGALG00000050995	LRRC47	99	51.064	Gallus_gallus
ENSTRUG00000017696	lrrc47	100	75.134	ENSGACG00000005550	lrrc47	99	75.313	Gasterosteus_aculeatus
ENSTRUG00000017696	lrrc47	99	50.337	ENSGAGG00000022584	LRRC47	99	51.429	Gopherus_agassizii
ENSTRUG00000017696	lrrc47	99	52.604	ENSGGOG00000015571	LRRC47	99	53.206	Gorilla_gorilla
ENSTRUG00000017696	lrrc47	99	51.038	ENSHGLG00000018278	LRRC47	95	51.916	Heterocephalus_glaber_female
ENSTRUG00000017696	lrrc47	70	57.855	ENSHGLG00100008507	LRRC47	99	58.603	Heterocephalus_glaber_male
ENSTRUG00000017696	lrrc47	100	76.036	ENSHCOG00000006348	lrrc47	98	75.856	Hippocampus_comes
ENSTRUG00000017696	lrrc47	99	53.240	ENSSTOG00000027559	LRRC47	99	53.448	Ictidomys_tridecemlineatus
ENSTRUG00000017696	lrrc47	99	53.659	ENSJJAG00000017474	Lrrc47	96	53.659	Jaculus_jaculus
ENSTRUG00000017696	lrrc47	100	76.386	ENSKMAG00000003414	lrrc47	100	76.029	Kryptolebias_marmoratus
ENSTRUG00000017696	lrrc47	99	52.604	ENSLAFG00000011657	LRRC47	99	53.646	Loxodonta_africana
ENSTRUG00000017696	lrrc47	99	39.130	ENSMFAG00000045730	LRRC47	92	53.488	Macaca_fascicularis
ENSTRUG00000017696	lrrc47	99	52.604	ENSMNEG00000042488	LRRC47	99	53.380	Macaca_nemestrina
ENSTRUG00000017696	lrrc47	77	55.705	ENSMLEG00000043735	LRRC47	90	56.696	Mandrillus_leucophaeus
ENSTRUG00000017696	lrrc47	99	53.251	ENSMAUG00000021337	Lrrc47	98	53.497	Mesocricetus_auratus
ENSTRUG00000017696	lrrc47	99	52.174	ENSMICG00000026816	LRRC47	99	52.696	Microcebus_murinus
ENSTRUG00000017696	lrrc47	99	53.004	ENSMOCG00000021279	Lrrc47	99	53.439	Microtus_ochrogaster
ENSTRUG00000017696	lrrc47	100	81.753	ENSMMOG00000017007	lrrc47	100	81.574	Mola_mola
ENSTRUG00000017696	lrrc47	99	50.177	ENSMODG00000006554	LRRC47	98	51.585	Monodelphis_domestica
ENSTRUG00000017696	lrrc47	99	52.797	MGP_CAROLIEiJ_G0026864	Lrrc47	99	52.696	Mus_caroli
ENSTRUG00000017696	lrrc47	99	52.972	ENSMUSG00000029028	Lrrc47	99	52.870	Mus_musculus
ENSTRUG00000017696	lrrc47	97	52.491	MGP_PahariEiJ_G0029212	Lrrc47	97	53.097	Mus_pahari
ENSTRUG00000017696	lrrc47	99	52.797	MGP_SPRETEiJ_G0027857	Lrrc47	99	52.696	Mus_spretus
ENSTRUG00000017696	lrrc47	66	60.477	ENSMPUG00000007321	LRRC47	75	61.640	Mustela_putorius_furo
ENSTRUG00000017696	lrrc47	99	52.381	ENSNGAG00000022153	Lrrc47	98	52.105	Nannospalax_galili
ENSTRUG00000017696	lrrc47	99	51.916	ENSNLEG00000008131	LRRC47	99	52.522	Nomascus_leucogenys
ENSTRUG00000017696	lrrc47	84	53.909	ENSODEG00000010882	LRRC47	93	53.909	Octodon_degus
ENSTRUG00000017696	lrrc47	97	76.111	ENSORLG00000002532	lrrc47	100	76.296	Oryzias_latipes
ENSTRUG00000017696	lrrc47	100	76.029	ENSORLG00020019601	lrrc47	100	76.208	Oryzias_latipes_hni
ENSTRUG00000017696	lrrc47	100	75.850	ENSORLG00015014040	lrrc47	100	76.029	Oryzias_latipes_hsok
ENSTRUG00000017696	lrrc47	100	75.850	ENSOMEG00000008989	lrrc47	100	76.029	Oryzias_melastigma
ENSTRUG00000017696	lrrc47	99	53.217	ENSOGAG00000001553	LRRC47	99	53.391	Otolemur_garnettii
ENSTRUG00000017696	lrrc47	99	50.785	ENSOARG00000015290	LRRC47	99	51.473	Ovis_aries
ENSTRUG00000017696	lrrc47	74	57.377	ENSPPAG00000036370	-	92	58.178	Pan_paniscus
ENSTRUG00000017696	lrrc47	99	51.568	ENSPPRG00000005261	LRRC47	98	51.826	Panthera_pardus
ENSTRUG00000017696	lrrc47	99	52.431	ENSPTRG00000000068	LRRC47	99	53.033	Pan_troglodytes
ENSTRUG00000017696	lrrc47	99	52.951	ENSPANG00000012437	LRRC47	99	53.726	Papio_anubis
ENSTRUG00000017696	lrrc47	66	61.804	ENSPSIG00000004196	LRRC47	99	62.169	Pelodiscus_sinensis
ENSTRUG00000017696	lrrc47	65	58.871	ENSPEMG00000021068	Lrrc47	99	60.054	Peromyscus_maniculatus_bairdii
ENSTRUG00000017696	lrrc47	99	53.954	ENSPCIG00000003638	LRRC47	98	54.641	Phascolarctos_cinereus
ENSTRUG00000017696	lrrc47	94	76.291	ENSPFOG00000000992	lrrc47	94	76.291	Poecilia_formosa
ENSTRUG00000017696	lrrc47	100	76.354	ENSPLAG00000008077	lrrc47	100	76.354	Poecilia_latipinna
ENSTRUG00000017696	lrrc47	100	75.719	ENSPMEG00000007367	lrrc47	100	75.899	Poecilia_mexicana
ENSTRUG00000017696	lrrc47	99	52.431	ENSPPYG00000001960	LRRC47	99	53.033	Pongo_abelii
ENSTRUG00000017696	lrrc47	99	52.348	ENSPCOG00000019161	LRRC47	99	52.696	Propithecus_coquereli
ENSTRUG00000017696	lrrc47	98	51.865	ENSPVAG00000009839	LRRC47	97	53.180	Pteropus_vampyrus
ENSTRUG00000017696	lrrc47	99	60.830	ENSPNAG00000017982	lrrc47	99	61.717	Pygocentrus_nattereri
ENSTRUG00000017696	lrrc47	99	52.696	ENSRNOG00000024796	Lrrc47	99	53.125	Rattus_norvegicus
ENSTRUG00000017696	lrrc47	99	52.951	ENSRBIG00000019437	LRRC47	99	53.726	Rhinopithecus_bieti
ENSTRUG00000017696	lrrc47	99	52.951	ENSRROG00000043182	LRRC47	99	53.726	Rhinopithecus_roxellana
ENSTRUG00000017696	lrrc47	79	55.752	ENSSBOG00000026334	LRRC47	92	56.512	Saimiri_boliviensis_boliviensis
ENSTRUG00000017696	lrrc47	99	48.866	ENSSHAG00000007360	LRRC47	98	49.565	Sarcophilus_harrisii
ENSTRUG00000017696	lrrc47	100	78.036	ENSSMAG00000009344	lrrc47	100	77.321	Scophthalmus_maximus
ENSTRUG00000017696	lrrc47	100	79.606	ENSSDUG00000014618	lrrc47	100	79.606	Seriola_dumerili
ENSTRUG00000017696	lrrc47	100	79.606	ENSSLDG00000018908	lrrc47	100	79.606	Seriola_lalandi_dorsalis
ENSTRUG00000017696	lrrc47	99	51.115	ENSSPUG00000010277	LRRC47	98	51.801	Sphenodon_punctatus
ENSTRUG00000017696	lrrc47	100	78.533	ENSSPAG00000005188	lrrc47	100	78.175	Stegastes_partitus
ENSTRUG00000017696	lrrc47	99	52.091	ENSSSCG00000039516	LRRC47	98	52.522	Sus_scrofa
ENSTRUG00000017696	lrrc47	70	61.795	ENSTGUG00000002737	LRRC47	98	61.795	Taeniopygia_guttata
ENSTRUG00000017696	lrrc47	100	88.809	ENSTNIG00000010923	lrrc47	99	89.531	Tetraodon_nigroviridis
ENSTRUG00000017696	lrrc47	99	51.736	ENSTTRG00000011751	LRRC47	99	51.910	Tursiops_truncatus
ENSTRUG00000017696	lrrc47	89	54.633	ENSUAMG00000012080	LRRC47	99	53.493	Ursus_americanus
ENSTRUG00000017696	lrrc47	66	60.743	ENSUMAG00000010781	LRRC47	80	61.111	Ursus_maritimus
ENSTRUG00000017696	lrrc47	94	51.277	ENSVVUG00000027118	LRRC47	93	51.825	Vulpes_vulpes
ENSTRUG00000017696	lrrc47	97	56.341	ENSXETG00000006029	lrrc47	97	56.884	Xenopus_tropicalis
ENSTRUG00000017696	lrrc47	99	76.417	ENSXCOG00000002813	lrrc47	98	76.417	Xiphophorus_couchianus
ENSTRUG00000017696	lrrc47	99	75.636	ENSXMAG00000019386	lrrc47	99	75.636	Xiphophorus_maculatus