EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017778 (Gene tree)
Gene ID: 101064991
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 44716 bases
Position: chr10:8351917-8396632
Accession: 101064991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000045571	Ribonuclease_3	PF00636.26	3.5e-43	1	2
ENSTRUP00000045571	Ribonuclease_3	PF00636.26	3.5e-43	2	2
ENSTRUP00000045571	Ribonucleas_3_3	PF14622.6	1.2e-44	1	2
ENSTRUP00000045571	Ribonucleas_3_3	PF14622.6	1.2e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045725	-	3750	XM_011608131	ENSTRUP00000045571	1250 (aa)	XP_011606433	H2V8N2

Gene Model

Click here to download ENSTRUG00000017778's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017778	drosha	85	79.433	ENSG00000113360	DROSHA	93	73.529	Homo_sapiens
ENSTRUG00000017778	drosha	85	76.678	ENSAMEG00000006000	DROSHA	64	89.217	Ailuropoda_melanoleuca
ENSTRUG00000017778	drosha	70	93.002	ENSACIG00000019308	drosha	86	93.076	Amphilophus_citrinellus
ENSTRUG00000017778	drosha	97	86.592	ENSATEG00000021939	drosha	92	86.353	Anabas_testudineus
ENSTRUG00000017778	drosha	97	73.705	ENSAPLG00000004372	DROSHA	86	89.557	Anas_platyrhynchos
ENSTRUG00000017778	drosha	96	73.344	ENSACAG00000007970	DROSHA	63	89.217	Anolis_carolinensis
ENSTRUG00000017778	drosha	85	76.417	ENSANAG00000020506	DROSHA	86	85.471	Aotus_nancymaae
ENSTRUG00000017778	drosha	97	85.375	ENSACLG00000012227	drosha	93	85.138	Astatotilapia_calliptera
ENSTRUG00000017778	drosha	98	80.144	ENSAMXG00000005582	drosha	99	79.250	Astyanax_mexicanus
ENSTRUG00000017778	drosha	85	80.204	ENSBTAG00000017551	DROSHA	93	74.199	Bos_taurus
ENSTRUG00000017778	drosha	63	35.945	WBGene00009163	drsh-1	71	35.945	Caenorhabditis_elegans
ENSTRUG00000017778	drosha	85	79.433	ENSCJAG00000018881	DROSHA	91	73.529	Callithrix_jacchus
ENSTRUG00000017778	drosha	85	79.068	ENSCAFG00020017559	DROSHA	84	93.277	Canis_lupus_dingo
ENSTRUG00000017778	drosha	85	79.159	ENSCHIG00000022226	DROSHA	93	73.354	Capra_hircus
ENSTRUG00000017778	drosha	84	76.360	ENSCPOG00000015051	DROSHA	68	89.330	Cavia_porcellus
ENSTRUG00000017778	drosha	85	79.342	ENSCCAG00000027283	DROSHA	86	89.103	Cebus_capucinus
ENSTRUG00000017778	drosha	85	79.342	ENSCATG00000016833	DROSHA	86	89.217	Cercocebus_atys
ENSTRUG00000017778	drosha	85	79.890	ENSCLAG00000013048	DROSHA	93	73.588	Chinchilla_lanigera
ENSTRUG00000017778	drosha	85	79.342	ENSCSAG00000017202	DROSHA	90	73.450	Chlorocebus_sabaeus
ENSTRUG00000017778	drosha	51	98.701	ENSCHOG00000011786	DROSHA	50	97.222	Choloepus_hoffmanni
ENSTRUG00000017778	drosha	96	74.222	ENSCPBG00000000467	DROSHA	96	74.901	Chrysemys_picta_bellii
ENSTRUG00000017778	drosha	61	58.065	ENSCSAVG00000010638	-	92	58.968	Ciona_savignyi
ENSTRUG00000017778	drosha	84	79.797	ENSCANG00000035071	DROSHA	87	89.217	Colobus_angolensis_palliatus
ENSTRUG00000017778	drosha	85	76.316	ENSCGRG00001008885	Drosha	64	89.444	Cricetulus_griseus_chok1gshd
ENSTRUG00000017778	drosha	85	76.316	ENSCGRG00000006944	Drosha	64	89.444	Cricetulus_griseus_crigri
ENSTRUG00000017778	drosha	97	83.004	ENSCSEG00000001452	drosha	93	82.767	Cynoglossus_semilaevis
ENSTRUG00000017778	drosha	97	85.292	ENSCVAG00000004619	drosha	93	85.052	Cyprinodon_variegatus
ENSTRUG00000017778	drosha	97	77.258	ENSDARG00000055563	drosha	93	76.750	Danio_rerio
ENSTRUG00000017778	drosha	73	85.775	ENSDNOG00000001537	DROSHA	64	89.217	Dasypus_novemcinctus
ENSTRUG00000017778	drosha	85	78.241	ENSDORG00000005624	Drosha	93	71.224	Dipodomys_ordii
ENSTRUG00000017778	drosha	80	49.632	FBgn0026722	drosha	67	55.481	Drosophila_melanogaster
ENSTRUG00000017778	drosha	80	67.198	ENSETEG00000007814	DROSHA	67	87.157	Echinops_telfairi
ENSTRUG00000017778	drosha	50	77.323	ENSEBUG00000005974	-	90	80.395	Eptatretus_burgeri
ENSTRUG00000017778	drosha	85	79.159	ENSEASG00005007149	DROSHA	93	73.802	Equus_asinus_asinus
ENSTRUG00000017778	drosha	85	79.159	ENSECAG00000013578	DROSHA	90	73.882	Equus_caballus
ENSTRUG00000017778	drosha	73	80.786	ENSEEUG00000006351	DROSHA	64	84.580	Erinaceus_europaeus
ENSTRUG00000017778	drosha	97	76.130	ENSELUG00000015039	drosha	91	76.594	Esox_lucius
ENSTRUG00000017778	drosha	85	79.159	ENSFCAG00000000360	DROSHA	93	73.882	Felis_catus
ENSTRUG00000017778	drosha	97	72.529	ENSFALG00000012843	DROSHA	93	68.884	Ficedula_albicollis
ENSTRUG00000017778	drosha	85	79.799	ENSFDAG00000018414	DROSHA	93	73.482	Fukomys_damarensis
ENSTRUG00000017778	drosha	93	74.916	ENSFHEG00000003840	drosha	96	73.070	Fundulus_heteroclitus
ENSTRUG00000017778	drosha	97	74.722	ENSGALG00000012916	DROSHA	93	75.299	Gallus_gallus
ENSTRUG00000017778	drosha	97	83.187	ENSGAFG00000016853	drosha	93	82.946	Gambusia_affinis
ENSTRUG00000017778	drosha	96	75.362	ENSGAGG00000005621	DROSHA	93	74.980	Gopherus_agassizii
ENSTRUG00000017778	drosha	85	79.433	ENSGGOG00000011006	DROSHA	86	89.217	Gorilla_gorilla
ENSTRUG00000017778	drosha	97	82.850	ENSHBUG00000015907	drosha	97	82.367	Haplochromis_burtoni
ENSTRUG00000017778	drosha	84	80.258	ENSHGLG00000018873	DROSHA	92	73.466	Heterocephalus_glaber_female
ENSTRUG00000017778	drosha	84	80.258	ENSHGLG00100015793	DROSHA	91	73.466	Heterocephalus_glaber_male
ENSTRUG00000017778	drosha	83	84.206	ENSHCOG00000008454	drosha	89	83.551	Hippocampus_comes
ENSTRUG00000017778	drosha	85	81.526	ENSIPUG00000021202	drosha	93	74.363	Ictalurus_punctatus
ENSTRUG00000017778	drosha	70	86.261	ENSSTOG00000016323	DROSHA	84	92.699	Ictidomys_tridecemlineatus
ENSTRUG00000017778	drosha	85	76.429	ENSJJAG00000019758	Drosha	64	88.990	Jaculus_jaculus
ENSTRUG00000017778	drosha	97	82.647	ENSLBEG00000006606	drosha	93	83.697	Labrus_bergylta
ENSTRUG00000017778	drosha	97	77.548	ENSLACG00000005937	DROSHA	93	76.475	Latimeria_chalumnae
ENSTRUG00000017778	drosha	97	79.375	ENSLOCG00000012852	drosha	93	77.561	Lepisosteus_oculatus
ENSTRUG00000017778	drosha	86	76.083	ENSLAFG00000013831	DROSHA	82	89.217	Loxodonta_africana
ENSTRUG00000017778	drosha	85	79.342	ENSMFAG00000003055	DROSHA	93	73.018	Macaca_fascicularis
ENSTRUG00000017778	drosha	85	79.342	ENSMMUG00000012193	DROSHA	86	89.217	Macaca_mulatta
ENSTRUG00000017778	drosha	85	79.342	ENSMNEG00000037529	DROSHA	93	73.173	Macaca_nemestrina
ENSTRUG00000017778	drosha	85	73.376	ENSMLEG00000024167	DROSHA	92	68.258	Mandrillus_leucophaeus
ENSTRUG00000017778	drosha	97	87.015	ENSMAMG00000012613	drosha	97	86.540	Mastacembelus_armatus
ENSTRUG00000017778	drosha	97	85.375	ENSMZEG00005019487	drosha	93	85.138	Maylandia_zebra
ENSTRUG00000017778	drosha	93	87.899	ENSMGAG00000005087	DROSHA	86	89.671	Meleagris_gallopavo
ENSTRUG00000017778	drosha	84	77.046	ENSMAUG00000002863	Drosha	64	89.444	Mesocricetus_auratus
ENSTRUG00000017778	drosha	85	78.449	ENSMICG00000002241	DROSHA	86	85.363	Microcebus_murinus
ENSTRUG00000017778	drosha	84	77.460	ENSMOCG00000015044	Drosha	64	89.444	Microtus_ochrogaster
ENSTRUG00000017778	drosha	69	92.054	ENSMMOG00000004016	drosha	88	92.054	Mola_mola
ENSTRUG00000017778	drosha	96	73.872	ENSMODG00000004807	DROSHA	93	72.408	Monodelphis_domestica
ENSTRUG00000017778	drosha	97	87.321	ENSMALG00000010542	drosha	93	87.480	Monopterus_albus
ENSTRUG00000017778	drosha	84	77.301	MGP_CAROLIEiJ_G0019687	Drosha	87	89.330	Mus_caroli
ENSTRUG00000017778	drosha	84	77.212	ENSMUSG00000022191	Drosha	64	89.330	Mus_musculus
ENSTRUG00000017778	drosha	84	77.301	MGP_PahariEiJ_G0016063	Drosha	87	89.217	Mus_pahari
ENSTRUG00000017778	drosha	84	78.105	MGP_SPRETEiJ_G0020580	Drosha	87	89.444	Mus_spretus
ENSTRUG00000017778	drosha	85	76.216	ENSMPUG00000015237	DROSHA	64	89.330	Mustela_putorius_furo
ENSTRUG00000017778	drosha	85	76.300	ENSMLUG00000002581	DROSHA	64	87.968	Myotis_lucifugus
ENSTRUG00000017778	drosha	84	70.196	ENSNGAG00000017329	Drosha	63	80.363	Nannospalax_galili
ENSTRUG00000017778	drosha	73	72.278	ENSNBRG00000001870	drosha	90	71.882	Neolamprologus_brichardi
ENSTRUG00000017778	drosha	85	76.658	ENSNLEG00000013963	DROSHA	86	89.217	Nomascus_leucogenys
ENSTRUG00000017778	drosha	68	73.162	ENSMEUG00000002029	DROSHA	64	73.162	Notamacropus_eugenii
ENSTRUG00000017778	drosha	85	83.863	ENSOPRG00000010845	DROSHA	79	83.863	Ochotona_princeps
ENSTRUG00000017778	drosha	85	76.216	ENSODEG00000001911	DROSHA	64	88.990	Octodon_degus
ENSTRUG00000017778	drosha	97	83.941	ENSONIG00000006578	drosha	93	78.198	Oreochromis_niloticus
ENSTRUG00000017778	drosha	53	74.671	ENSOANG00000015744	-	88	74.671	Ornithorhynchus_anatinus
ENSTRUG00000017778	drosha	96	73.478	ENSOCUG00000000367	DROSHA	77	81.292	Oryctolagus_cuniculus
ENSTRUG00000017778	drosha	97	83.034	ENSORLG00000013592	drosha	93	81.659	Oryzias_latipes
ENSTRUG00000017778	drosha	70	94.071	ENSORLG00020002854	drosha	86	94.585	Oryzias_latipes_hni
ENSTRUG00000017778	drosha	70	92.360	ENSORLG00015003156	drosha	86	92.849	Oryzias_latipes_hsok
ENSTRUG00000017778	drosha	99	80.751	ENSOMEG00000001062	drosha	97	80.799	Oryzias_melastigma
ENSTRUG00000017778	drosha	85	75.728	ENSOGAG00000005424	DROSHA	84	86.961	Otolemur_garnettii
ENSTRUG00000017778	drosha	85	79.433	ENSPPAG00000037526	DROSHA	86	89.840	Pan_paniscus
ENSTRUG00000017778	drosha	85	79.159	ENSPPRG00000002687	DROSHA	93	73.882	Panthera_pardus
ENSTRUG00000017778	drosha	85	79.159	ENSPTIG00000017523	DROSHA	93	73.882	Panthera_tigris_altaica
ENSTRUG00000017778	drosha	85	79.433	ENSPTRG00000016762	DROSHA	93	73.529	Pan_troglodytes
ENSTRUG00000017778	drosha	85	79.342	ENSPANG00000003027	DROSHA	93	73.018	Papio_anubis
ENSTRUG00000017778	drosha	97	81.446	ENSPKIG00000011514	drosha	100	80.803	Paramormyrops_kingsleyae
ENSTRUG00000017778	drosha	84	77.927	ENSPEMG00000000607	Drosha	64	89.330	Peromyscus_maniculatus_bairdii
ENSTRUG00000017778	drosha	96	75.303	ENSPCIG00000006010	DROSHA	94	73.847	Phascolarctos_cinereus
ENSTRUG00000017778	drosha	85	89.157	ENSPREG00000022302	drosha	94	84.279	Poecilia_reticulata
ENSTRUG00000017778	drosha	85	76.658	ENSPPYG00000015370	DROSHA	64	89.217	Pongo_abelii
ENSTRUG00000017778	drosha	80	98.621	ENSPCAG00000007190	DROSHA	59	98.621	Procavia_capensis
ENSTRUG00000017778	drosha	85	75.818	ENSPCOG00000028511	DROSHA	86	84.904	Propithecus_coquereli
ENSTRUG00000017778	drosha	85	71.743	ENSPVAG00000013167	DROSHA	64	83.655	Pteropus_vampyrus
ENSTRUG00000017778	drosha	97	85.217	ENSPNYG00000000398	drosha	87	94.050	Pundamilia_nyererei
ENSTRUG00000017778	drosha	86	89.304	ENSPNAG00000011876	drosha	88	88.889	Pygocentrus_nattereri
ENSTRUG00000017778	drosha	84	77.391	ENSRNOG00000013451	Drosha	64	89.217	Rattus_norvegicus
ENSTRUG00000017778	drosha	85	78.519	ENSRBIG00000032786	DROSHA	86	88.409	Rhinopithecus_bieti
ENSTRUG00000017778	drosha	85	79.342	ENSRROG00000028199	DROSHA	91	73.450	Rhinopithecus_roxellana
ENSTRUG00000017778	drosha	85	80.055	ENSSBOG00000024008	DROSHA	86	87.287	Saimiri_boliviensis_boliviensis
ENSTRUG00000017778	drosha	96	73.872	ENSSHAG00000015198	DROSHA	85	88.801	Sarcophilus_harrisii
ENSTRUG00000017778	drosha	86	84.531	ENSSFOG00015009776	drosha	84	84.891	Scleropages_formosus
ENSTRUG00000017778	drosha	97	87.823	ENSSMAG00000008069	drosha	95	87.177	Scophthalmus_maximus
ENSTRUG00000017778	drosha	97	87.905	ENSSDUG00000010944	drosha	87	95.147	Seriola_dumerili
ENSTRUG00000017778	drosha	97	87.965	ENSSLDG00000025271	drosha	87	95.147	Seriola_lalandi_dorsalis
ENSTRUG00000017778	drosha	67	70.388	ENSSARG00000004436	-	58	86.184	Sorex_araneus
ENSTRUG00000017778	drosha	96	70.598	ENSSPUG00000006902	DROSHA	93	70.365	Sphenodon_punctatus
ENSTRUG00000017778	drosha	82	81.689	ENSSSCG00000016809	DROSHA	96	73.847	Sus_scrofa
ENSTRUG00000017778	drosha	97	72.334	ENSTGUG00000001955	DROSHA	86	88.776	Taeniopygia_guttata
ENSTRUG00000017778	drosha	97	89.125	ENSTNIG00000008688	drosha	91	95.937	Tetraodon_nigroviridis
ENSTRUG00000017778	drosha	73	76.791	ENSTBEG00000000537	DROSHA	88	79.455	Tupaia_belangeri
ENSTRUG00000017778	drosha	85	75.929	ENSTTRG00000004210	DROSHA	64	89.217	Tursiops_truncatus
ENSTRUG00000017778	drosha	85	80.759	ENSUAMG00000025257	DROSHA	93	74.738	Ursus_americanus
ENSTRUG00000017778	drosha	85	79.707	ENSUMAG00000014097	DROSHA	82	93.277	Ursus_maritimus
ENSTRUG00000017778	drosha	73	79.702	ENSVPAG00000011260	DROSHA	79	82.860	Vicugna_pacos
ENSTRUG00000017778	drosha	85	79.159	ENSVVUG00000022212	DROSHA	86	92.965	Vulpes_vulpes
ENSTRUG00000017778	drosha	97	66.667	ENSXETG00000016701	drosha	94	70.794	Xenopus_tropicalis