EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000017811 (Gene tree)
Gene ID: 101079760
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3885 bases
Position: chr16:8343548-8347432
Accession: 101079760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000045655	RRM_1	PF00076.22	6.6e-31	1	2
ENSTRUP00000045655	RRM_1	PF00076.22	6.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045809	-	1888	XM_003971834	ENSTRUP00000045655	310 (aa)	XP_003971883	H2V8W5

Gene Model

Click here to download ENSTRUG00000017811's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG
tru05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000017811	srsf5b	54	44.444	ENSTRUG00000003691	srsf1a	64	45.294
ENSTRUG00000017811	srsf5b	80	48.718	ENSTRUG00000011891	srsf4	60	59.278
ENSTRUG00000017811	srsf5b	59	68.063	ENSTRUG00000022908	srsf5a	66	66.495
ENSTRUG00000017811	srsf5b	65	40.777	ENSTRUG00000017058	-	81	42.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017811	srsf5b	59	84.153	ENSG00000100650	SRSF5	98	80.159	Homo_sapiens
ENSTRUG00000017811	srsf5b	95	79.599	ENSAPOG00000008642	srsf5b	65	95.213	Acanthochromis_polyacanthus
ENSTRUG00000017811	srsf5b	59	84.153	ENSAMEG00000014574	SRSF5	67	83.333	Ailuropoda_melanoleuca
ENSTRUG00000017811	srsf5b	100	75.926	ENSACIG00000010742	srsf5b	81	89.147	Amphilophus_citrinellus
ENSTRUG00000017811	srsf5b	95	79.264	ENSAOCG00000005719	srsf5b	65	95.213	Amphiprion_ocellaris
ENSTRUG00000017811	srsf5b	95	79.264	ENSAPEG00000007830	srsf5b	65	95.213	Amphiprion_percula
ENSTRUG00000017811	srsf5b	95	77.258	ENSATEG00000019112	srsf5b	64	94.149	Anabas_testudineus
ENSTRUG00000017811	srsf5b	57	83.051	ENSAPLG00000014681	SRSF5	69	82.258	Anas_platyrhynchos
ENSTRUG00000017811	srsf5b	59	84.699	ENSACAG00000005143	SRSF5	69	82.796	Anolis_carolinensis
ENSTRUG00000017811	srsf5b	59	84.153	ENSANAG00000027977	-	88	80.159	Aotus_nancymaae
ENSTRUG00000017811	srsf5b	100	76.471	ENSACLG00000026424	srsf5b	64	92.021	Astatotilapia_calliptera
ENSTRUG00000017811	srsf5b	60	93.048	ENSAMXG00000011932	srsf5b	84	86.508	Astyanax_mexicanus
ENSTRUG00000017811	srsf5b	59	84.153	ENSBTAG00000011596	SRSF5	67	83.333	Bos_taurus
ENSTRUG00000017811	srsf5b	59	84.153	ENSCJAG00000014884	SRSF5	88	80.159	Callithrix_jacchus
ENSTRUG00000017811	srsf5b	59	84.153	ENSCAFG00000016589	SRSF5	67	83.333	Canis_familiaris
ENSTRUG00000017811	srsf5b	59	84.153	ENSCAFG00020005661	SRSF5	67	83.333	Canis_lupus_dingo
ENSTRUG00000017811	srsf5b	59	84.153	ENSCHIG00000016794	SRSF5	66	83.333	Capra_hircus
ENSTRUG00000017811	srsf5b	59	84.153	ENSTSYG00000007786	SRSF5	88	80.159	Carlito_syrichta
ENSTRUG00000017811	srsf5b	59	84.153	ENSCAPG00000008801	SRSF5	66	83.333	Cavia_aperea
ENSTRUG00000017811	srsf5b	59	84.153	ENSCPOG00000039926	SRSF5	66	83.333	Cavia_porcellus
ENSTRUG00000017811	srsf5b	59	84.153	ENSCCAG00000029002	SRSF5	88	80.159	Cebus_capucinus
ENSTRUG00000017811	srsf5b	59	84.153	ENSCATG00000045051	SRSF5	88	80.159	Cercocebus_atys
ENSTRUG00000017811	srsf5b	59	84.153	ENSCLAG00000004755	SRSF5	67	83.333	Chinchilla_lanigera
ENSTRUG00000017811	srsf5b	59	84.153	ENSCSAG00000013041	SRSF5	67	83.333	Chlorocebus_sabaeus
ENSTRUG00000017811	srsf5b	59	84.699	ENSCPBG00000021653	SRSF5	68	83.871	Chrysemys_picta_bellii
ENSTRUG00000017811	srsf5b	59	84.153	ENSCANG00000030560	SRSF5	88	80.159	Colobus_angolensis_palliatus
ENSTRUG00000017811	srsf5b	59	84.153	ENSCGRG00001015339	Srsf5	68	83.333	Cricetulus_griseus_chok1gshd
ENSTRUG00000017811	srsf5b	59	84.153	ENSCGRG00000009833	Srsf5	68	83.333	Cricetulus_griseus_crigri
ENSTRUG00000017811	srsf5b	81	84.646	ENSCSEG00000003801	srsf5b	66	92.632	Cynoglossus_semilaevis
ENSTRUG00000017811	srsf5b	96	83.721	ENSCVAG00000017240	srsf5b	58	93.617	Cyprinodon_variegatus
ENSTRUG00000017811	srsf5b	59	92.350	ENSDARG00000027734	srsf5b	90	85.714	Danio_rerio
ENSTRUG00000017811	srsf5b	59	84.153	ENSDNOG00000006160	SRSF5	68	83.333	Dasypus_novemcinctus
ENSTRUG00000017811	srsf5b	59	84.153	ENSDORG00000003989	Srsf5	68	83.333	Dipodomys_ordii
ENSTRUG00000017811	srsf5b	59	80.328	ENSETEG00000020396	SRSF5	68	79.570	Echinops_telfairi
ENSTRUG00000017811	srsf5b	60	63.021	ENSEBUG00000006229	srsf5b	69	63.492	Eptatretus_burgeri
ENSTRUG00000017811	srsf5b	59	84.153	ENSEASG00005016615	SRSF5	67	83.333	Equus_asinus_asinus
ENSTRUG00000017811	srsf5b	59	84.153	ENSECAG00000026873	SRSF5	88	80.159	Equus_caballus
ENSTRUG00000017811	srsf5b	95	74.675	ENSELUG00000019852	srsf5b	85	75.694	Esox_lucius
ENSTRUG00000017811	srsf5b	59	84.153	ENSFCAG00000008848	SRSF5	88	80.159	Felis_catus
ENSTRUG00000017811	srsf5b	59	81.967	ENSFALG00000004979	SRSF5	68	81.183	Ficedula_albicollis
ENSTRUG00000017811	srsf5b	59	84.153	ENSFDAG00000011562	SRSF5	68	83.333	Fukomys_damarensis
ENSTRUG00000017811	srsf5b	60	93.617	ENSFHEG00000009476	srsf5b	61	94.149	Fundulus_heteroclitus
ENSTRUG00000017811	srsf5b	60	75.664	ENSGMOG00000000595	srsf5b	99	73.894	Gadus_morhua
ENSTRUG00000017811	srsf5b	59	81.421	ENSGALG00000009421	SRSF5	88	75.397	Gallus_gallus
ENSTRUG00000017811	srsf5b	95	74.497	ENSGAFG00000002865	srsf5b	62	93.617	Gambusia_affinis
ENSTRUG00000017811	srsf5b	59	65.306	ENSGACG00000007834	srsf5b	86	79.412	Gasterosteus_aculeatus
ENSTRUG00000017811	srsf5b	59	84.699	ENSGAGG00000004447	SRSF5	68	83.871	Gopherus_agassizii
ENSTRUG00000017811	srsf5b	59	84.153	ENSGGOG00000016462	SRSF5	88	80.159	Gorilla_gorilla
ENSTRUG00000017811	srsf5b	100	76.161	ENSHBUG00000012462	srsf5b	93	90.625	Haplochromis_burtoni
ENSTRUG00000017811	srsf5b	59	83.607	ENSHGLG00000010147	SRSF5	67	82.796	Heterocephalus_glaber_female
ENSTRUG00000017811	srsf5b	59	83.607	ENSHGLG00100015328	SRSF5	67	82.796	Heterocephalus_glaber_male
ENSTRUG00000017811	srsf5b	81	49.805	ENSHGLG00100000095	-	62	59.551	Heterocephalus_glaber_male
ENSTRUG00000017811	srsf5b	60	84.896	ENSHCOG00000005592	srsf5b	66	84.896	Hippocampus_comes
ENSTRUG00000017811	srsf5b	59	84.153	ENSSTOG00000020672	SRSF5	67	83.333	Ictidomys_tridecemlineatus
ENSTRUG00000017811	srsf5b	59	84.153	ENSJJAG00000001688	Srsf5	67	83.333	Jaculus_jaculus
ENSTRUG00000017811	srsf5b	95	77.517	ENSKMAG00000020486	srsf5b	84	87.402	Kryptolebias_marmoratus
ENSTRUG00000017811	srsf5b	95	76.412	ENSLBEG00000013647	srsf5b	64	90.000	Labrus_bergylta
ENSTRUG00000017811	srsf5b	59	84.153	ENSLACG00000005874	SRSF5	68	83.333	Latimeria_chalumnae
ENSTRUG00000017811	srsf5b	59	86.631	ENSLOCG00000012438	srsf5b	70	81.675	Lepisosteus_oculatus
ENSTRUG00000017811	srsf5b	59	83.607	ENSLAFG00000005260	SRSF5	67	82.796	Loxodonta_africana
ENSTRUG00000017811	srsf5b	59	84.153	ENSMFAG00000002393	SRSF5	88	80.159	Macaca_fascicularis
ENSTRUG00000017811	srsf5b	59	84.153	ENSMNEG00000030872	SRSF5	88	80.159	Macaca_nemestrina
ENSTRUG00000017811	srsf5b	59	84.153	ENSMLEG00000030017	SRSF5	88	80.159	Mandrillus_leucophaeus
ENSTRUG00000017811	srsf5b	90	80.071	ENSMAMG00000002673	srsf5b	64	94.681	Mastacembelus_armatus
ENSTRUG00000017811	srsf5b	100	76.471	ENSMZEG00005003550	srsf5b	64	92.021	Maylandia_zebra
ENSTRUG00000017811	srsf5b	59	84.153	ENSMAUG00000009544	Srsf5	67	83.333	Mesocricetus_auratus
ENSTRUG00000017811	srsf5b	59	84.153	ENSMICG00000037432	-	88	80.159	Microcebus_murinus
ENSTRUG00000017811	srsf5b	59	84.153	ENSMOCG00000013134	Srsf5	67	83.333	Microtus_ochrogaster
ENSTRUG00000017811	srsf5b	59	95.676	ENSMMOG00000000137	srsf5b	80	93.846	Mola_mola
ENSTRUG00000017811	srsf5b	59	84.699	ENSMODG00000011362	SRSF5	68	83.871	Monodelphis_domestica
ENSTRUG00000017811	srsf5b	95	78.000	ENSMALG00000021875	srsf5b	84	89.147	Monopterus_albus
ENSTRUG00000017811	srsf5b	59	84.153	ENSMUSG00000021134	Srsf5	96	88.636	Mus_musculus
ENSTRUG00000017811	srsf5b	59	84.153	MGP_PahariEiJ_G0029659	Srsf5	68	83.333	Mus_pahari
ENSTRUG00000017811	srsf5b	59	84.153	ENSMPUG00000007458	SRSF5	67	83.333	Mustela_putorius_furo
ENSTRUG00000017811	srsf5b	59	84.153	ENSMLUG00000011939	SRSF5	65	83.333	Myotis_lucifugus
ENSTRUG00000017811	srsf5b	59	84.153	ENSNGAG00000010073	-	67	83.333	Nannospalax_galili
ENSTRUG00000017811	srsf5b	100	74.462	ENSNBRG00000001285	srsf5b	65	89.474	Neolamprologus_brichardi
ENSTRUG00000017811	srsf5b	59	84.153	ENSNLEG00000001615	SRSF5	88	80.159	Nomascus_leucogenys
ENSTRUG00000017811	srsf5b	59	84.153	ENSOPRG00000008286	SRSF5	68	83.505	Ochotona_princeps
ENSTRUG00000017811	srsf5b	59	84.153	ENSODEG00000013469	-	68	83.333	Octodon_degus
ENSTRUG00000017811	srsf5b	59	82.514	ENSODEG00000000700	-	69	81.720	Octodon_degus
ENSTRUG00000017811	srsf5b	100	76.471	ENSONIG00000005759	srsf5b	64	92.021	Oreochromis_niloticus
ENSTRUG00000017811	srsf5b	59	80.328	ENSOANG00000013336	SRSF5	68	79.570	Ornithorhynchus_anatinus
ENSTRUG00000017811	srsf5b	59	84.153	ENSOCUG00000009274	SRSF5	66	83.333	Oryctolagus_cuniculus
ENSTRUG00000017811	srsf5b	95	72.131	ENSORLG00000029854	srsf5b	59	87.435	Oryzias_latipes
ENSTRUG00000017811	srsf5b	95	75.000	ENSORLG00015001720	srsf5b	65	90.000	Oryzias_latipes_hsok
ENSTRUG00000017811	srsf5b	59	84.153	ENSOGAG00000015122	SRSF5	67	83.333	Otolemur_garnettii
ENSTRUG00000017811	srsf5b	59	84.153	ENSPPAG00000029921	SRSF5	88	80.159	Pan_paniscus
ENSTRUG00000017811	srsf5b	59	84.153	ENSPPRG00000012903	SRSF5	88	80.159	Panthera_pardus
ENSTRUG00000017811	srsf5b	59	84.153	ENSPTIG00000018589	SRSF5	88	80.159	Panthera_tigris_altaica
ENSTRUG00000017811	srsf5b	59	84.153	ENSPTRG00000006488	SRSF5	88	80.159	Pan_troglodytes
ENSTRUG00000017811	srsf5b	59	84.153	ENSPANG00000021091	SRSF5	88	80.159	Papio_anubis
ENSTRUG00000017811	srsf5b	59	84.699	ENSPSIG00000012522	SRSF5	69	83.871	Pelodiscus_sinensis
ENSTRUG00000017811	srsf5b	59	84.153	ENSPEMG00000020173	Srsf5	68	83.333	Peromyscus_maniculatus_bairdii
ENSTRUG00000017811	srsf5b	60	62.626	ENSPMAG00000007790	srsf5b	68	60.914	Petromyzon_marinus
ENSTRUG00000017811	srsf5b	59	84.699	ENSPCIG00000011877	SRSF5	68	83.871	Phascolarctos_cinereus
ENSTRUG00000017811	srsf5b	95	77.852	ENSPFOG00000017700	srsf5b	62	94.149	Poecilia_formosa
ENSTRUG00000017811	srsf5b	95	77.592	ENSPLAG00000006480	srsf5b	63	90.476	Poecilia_latipinna
ENSTRUG00000017811	srsf5b	95	77.852	ENSPMEG00000012751	srsf5b	84	90.625	Poecilia_mexicana
ENSTRUG00000017811	srsf5b	95	74.497	ENSPREG00000010381	srsf5b	62	93.617	Poecilia_reticulata
ENSTRUG00000017811	srsf5b	59	84.153	ENSPPYG00000005945	SRSF5	67	83.333	Pongo_abelii
ENSTRUG00000017811	srsf5b	59	84.153	ENSPCOG00000014442	SRSF5	88	80.159	Propithecus_coquereli
ENSTRUG00000017811	srsf5b	100	70.279	ENSPNYG00000002669	srsf5b	94	90.625	Pundamilia_nyererei
ENSTRUG00000017811	srsf5b	60	92.513	ENSPNAG00000011262	srsf5b	84	85.714	Pygocentrus_nattereri
ENSTRUG00000017811	srsf5b	59	84.153	ENSRNOG00000005513	Srsf5	68	83.333	Rattus_norvegicus
ENSTRUG00000017811	srsf5b	59	84.153	ENSRBIG00000013003	SRSF5	88	80.159	Rhinopithecus_bieti
ENSTRUG00000017811	srsf5b	59	84.153	ENSRROG00000043407	SRSF5	88	80.159	Rhinopithecus_roxellana
ENSTRUG00000017811	srsf5b	59	84.153	ENSSBOG00000030784	SRSF5	88	80.159	Saimiri_boliviensis_boliviensis
ENSTRUG00000017811	srsf5b	59	84.699	ENSSHAG00000002871	SRSF5	68	83.871	Sarcophilus_harrisii
ENSTRUG00000017811	srsf5b	96	78.981	ENSSMAG00000019728	srsf5b	62	88.060	Scophthalmus_maximus
ENSTRUG00000017811	srsf5b	93	76.289	ENSSDUG00000005766	srsf5b	66	94.681	Seriola_dumerili
ENSTRUG00000017811	srsf5b	95	78.595	ENSSLDG00000023255	srsf5b	84	90.625	Seriola_lalandi_dorsalis
ENSTRUG00000017811	srsf5b	59	70.492	ENSSARG00000001059	SRSF5	67	70.430	Sorex_araneus
ENSTRUG00000017811	srsf5b	59	83.511	ENSSPUG00000002464	SRSF5	89	78.626	Sphenodon_punctatus
ENSTRUG00000017811	srsf5b	95	79.599	ENSSPAG00000015325	srsf5b	65	92.553	Stegastes_partitus
ENSTRUG00000017811	srsf5b	59	84.153	ENSSSCG00000032583	SRSF5	67	83.333	Sus_scrofa
ENSTRUG00000017811	srsf5b	59	81.967	ENSTGUG00000011425	SRSF5	68	81.183	Taeniopygia_guttata
ENSTRUG00000017811	srsf5b	96	81.544	ENSTNIG00000016411	srsf5b	97	77.228	Tetraodon_nigroviridis
ENSTRUG00000017811	srsf5b	89	72.202	ENSTBEG00000001972	SRSF5	66	81.183	Tupaia_belangeri
ENSTRUG00000017811	srsf5b	59	84.066	ENSTTRG00000003318	SRSF5	66	83.243	Tursiops_truncatus
ENSTRUG00000017811	srsf5b	59	84.153	ENSUAMG00000014184	SRSF5	67	83.333	Ursus_americanus
ENSTRUG00000017811	srsf5b	59	87.500	ENSUMAG00000009827	SRSF5	67	83.333	Ursus_maritimus
ENSTRUG00000017811	srsf5b	59	84.153	ENSVPAG00000006448	SRSF5	67	83.333	Vicugna_pacos
ENSTRUG00000017811	srsf5b	59	84.153	ENSVVUG00000003790	SRSF5	67	83.333	Vulpes_vulpes
ENSTRUG00000017811	srsf5b	60	81.915	ENSXETG00000002211	srsf5	68	82.011	Xenopus_tropicalis
ENSTRUG00000017811	srsf5b	95	69.565	ENSXCOG00000001570	srsf5b	65	90.476	Xiphophorus_couchianus
ENSTRUG00000017811	srsf5b	95	75.585	ENSXMAG00000026416	srsf5b	84	89.147	Xiphophorus_maculatus