EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000017839 (Gene tree)
Gene ID: 101068582
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5899 bases
Position: chr1:15544007-15549905
Accession: 101068582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000045727	RRM_1	PF00076.22	6e-11	1	1
ENSTRUP00000045727	RRM_3	PF08777.11	2.7e-29	1	1
ENSTRUP00000045727	La	PF05383.17	4.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000045881	-	3224	XM_003961845	ENSTRUP00000045727	396 (aa)	XP_003961894	H2V937

Gene Model

Click here to download ENSTRUG00000017839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017839	ssb	100	56.618	ENSG00000138385	SSB	98	63.559	Homo_sapiens
ENSTRUG00000017839	ssb	100	82.161	ENSAPOG00000003448	ssb	100	78.894	Acanthochromis_polyacanthus
ENSTRUG00000017839	ssb	100	55.476	ENSAMEG00000010507	SSB	99	55.609	Ailuropoda_melanoleuca
ENSTRUG00000017839	ssb	93	78.378	ENSACIG00000001738	ssb	97	78.378	Amphilophus_citrinellus
ENSTRUG00000017839	ssb	100	81.910	ENSAOCG00000020398	ssb	100	81.910	Amphiprion_ocellaris
ENSTRUG00000017839	ssb	100	81.910	ENSAPEG00000020395	ssb	100	81.910	Amphiprion_percula
ENSTRUG00000017839	ssb	100	82.206	ENSATEG00000016884	ssb	100	79.449	Anabas_testudineus
ENSTRUG00000017839	ssb	100	54.739	ENSAPLG00000006109	SSB	99	54.502	Anas_platyrhynchos
ENSTRUG00000017839	ssb	100	56.235	ENSACAG00000017008	SSB	99	55.990	Anolis_carolinensis
ENSTRUG00000017839	ssb	100	50.743	ENSANAG00000027195	-	99	50.743	Aotus_nancymaae
ENSTRUG00000017839	ssb	100	74.559	ENSACLG00000010798	ssb	100	74.559	Astatotilapia_calliptera
ENSTRUG00000017839	ssb	100	59.024	ENSAMXG00000012606	ssb	100	60.244	Astyanax_mexicanus
ENSTRUG00000017839	ssb	100	58.416	ENSBTAG00000008716	SSB	99	57.320	Bos_taurus
ENSTRUG00000017839	ssb	75	34.653	WBGene00016653	C44E4.4	76	34.641	Caenorhabditis_elegans
ENSTRUG00000017839	ssb	100	57.778	ENSCJAG00000045073	SSB	99	57.426	Callithrix_jacchus
ENSTRUG00000017839	ssb	100	57.389	ENSCAFG00000012418	SSB	99	56.790	Canis_familiaris
ENSTRUG00000017839	ssb	100	57.389	ENSCAFG00020002900	SSB	99	56.790	Canis_lupus_dingo
ENSTRUG00000017839	ssb	100	57.531	ENSCHIG00000022624	-	99	56.931	Capra_hircus
ENSTRUG00000017839	ssb	100	53.980	ENSCHIG00000022196	-	82	59.021	Capra_hircus
ENSTRUG00000017839	ssb	99	57.426	ENSTSYG00000000097	SSB	99	57.072	Carlito_syrichta
ENSTRUG00000017839	ssb	100	57.531	ENSCPOG00000003338	SSB	99	56.931	Cavia_porcellus
ENSTRUG00000017839	ssb	100	57.531	ENSCCAG00000035147	SSB	99	57.178	Cebus_capucinus
ENSTRUG00000017839	ssb	99	42.500	ENSCATG00000042909	-	98	41.855	Cercocebus_atys
ENSTRUG00000017839	ssb	71	53.448	ENSCATG00000036701	SSB	83	52.595	Cercocebus_atys
ENSTRUG00000017839	ssb	100	57.778	ENSCLAG00000015617	-	99	57.178	Chinchilla_lanigera
ENSTRUG00000017839	ssb	98	52.273	ENSCSAG00000018390	-	99	51.899	Chlorocebus_sabaeus
ENSTRUG00000017839	ssb	100	57.284	ENSCSAG00000015200	SSB	88	56.683	Chlorocebus_sabaeus
ENSTRUG00000017839	ssb	100	57.778	ENSCHOG00000007763	SSB	99	57.178	Choloepus_hoffmanni
ENSTRUG00000017839	ssb	100	57.421	ENSCPBG00000006519	SSB	99	59.314	Chrysemys_picta_bellii
ENSTRUG00000017839	ssb	91	46.049	ENSCANG00000028838	-	85	45.355	Colobus_angolensis_palliatus
ENSTRUG00000017839	ssb	100	49.505	ENSCANG00000033240	-	99	49.132	Colobus_angolensis_palliatus
ENSTRUG00000017839	ssb	100	57.284	ENSCANG00000027695	SSB	99	56.931	Colobus_angolensis_palliatus
ENSTRUG00000017839	ssb	100	52.812	ENSCGRG00001024831	Ssb	99	52.812	Cricetulus_griseus_chok1gshd
ENSTRUG00000017839	ssb	100	52.812	ENSCGRG00000005387	Ssb	99	52.812	Cricetulus_griseus_crigri
ENSTRUG00000017839	ssb	99	79.648	ENSCSEG00000011599	ssb	99	80.000	Cynoglossus_semilaevis
ENSTRUG00000017839	ssb	100	76.500	ENSCVAG00000021558	ssb	100	76.500	Cyprinodon_variegatus
ENSTRUG00000017839	ssb	100	61.538	ENSDARG00000029252	ssb	100	61.538	Danio_rerio
ENSTRUG00000017839	ssb	100	57.778	ENSDNOG00000013450	SSB	99	57.178	Dasypus_novemcinctus
ENSTRUG00000017839	ssb	100	55.172	ENSDORG00000005543	Ssb	99	55.665	Dipodomys_ordii
ENSTRUG00000017839	ssb	85	35.876	FBgn0011638	La	78	37.383	Drosophila_melanogaster
ENSTRUG00000017839	ssb	51	61.386	ENSETEG00000004614	-	52	61.386	Echinops_telfairi
ENSTRUG00000017839	ssb	99	45.226	ENSEBUG00000001237	ssb	97	45.455	Eptatretus_burgeri
ENSTRUG00000017839	ssb	100	58.025	ENSEASG00005022835	SSB	99	57.426	Equus_asinus_asinus
ENSTRUG00000017839	ssb	100	58.025	ENSECAG00000018495	SSB	99	57.426	Equus_caballus
ENSTRUG00000017839	ssb	77	49.351	ENSEEUG00000008077	SSB	78	49.351	Erinaceus_europaeus
ENSTRUG00000017839	ssb	100	67.990	ENSELUG00000020929	ssb	100	67.990	Esox_lucius
ENSTRUG00000017839	ssb	100	58.128	ENSFCAG00000011601	SSB	99	57.531	Felis_catus
ENSTRUG00000017839	ssb	99	57.284	ENSFALG00000000930	SSB	99	57.284	Ficedula_albicollis
ENSTRUG00000017839	ssb	100	57.778	ENSFDAG00000000598	SSB	99	57.178	Fukomys_damarensis
ENSTRUG00000017839	ssb	74	76.412	ENSFHEG00000003268	ssb	94	75.817	Fundulus_heteroclitus
ENSTRUG00000017839	ssb	98	71.500	ENSGMOG00000002664	ssb	100	71.250	Gadus_morhua
ENSTRUG00000017839	ssb	99	58.374	ENSGALG00000009677	SSB	99	57.143	Gallus_gallus
ENSTRUG00000017839	ssb	100	77.667	ENSGAFG00000002749	ssb	100	74.938	Gambusia_affinis
ENSTRUG00000017839	ssb	100	77.970	ENSGACG00000005107	ssb	100	77.475	Gasterosteus_aculeatus
ENSTRUG00000017839	ssb	100	56.934	ENSGAGG00000007807	SSB	99	58.824	Gopherus_agassizii
ENSTRUG00000017839	ssb	100	47.573	ENSGGOG00000024891	-	99	48.267	Gorilla_gorilla
ENSTRUG00000017839	ssb	54	52.703	ENSGGOG00000023471	-	90	51.131	Gorilla_gorilla
ENSTRUG00000017839	ssb	100	74.307	ENSHBUG00000006584	ssb	100	74.307	Haplochromis_burtoni
ENSTRUG00000017839	ssb	100	57.039	ENSHGLG00000017580	-	99	56.311	Heterocephalus_glaber_female
ENSTRUG00000017839	ssb	100	52.346	ENSHGLG00000004478	-	99	52.346	Heterocephalus_glaber_female
ENSTRUG00000017839	ssb	100	52.000	ENSHGLG00000005832	-	99	51.378	Heterocephalus_glaber_female
ENSTRUG00000017839	ssb	100	51.629	ENSHGLG00100008767	-	99	51.378	Heterocephalus_glaber_male
ENSTRUG00000017839	ssb	100	57.039	ENSHGLG00100003084	-	99	56.311	Heterocephalus_glaber_male
ENSTRUG00000017839	ssb	99	76.142	ENSHCOG00000019011	ssb	99	76.396	Hippocampus_comes
ENSTRUG00000017839	ssb	100	61.125	ENSIPUG00000003681	SSB	100	61.125	Ictalurus_punctatus
ENSTRUG00000017839	ssb	100	57.531	ENSSTOG00000008416	SSB	99	56.931	Ictidomys_tridecemlineatus
ENSTRUG00000017839	ssb	89	47.324	ENSJJAG00000016250	-	94	46.610	Jaculus_jaculus
ENSTRUG00000017839	ssb	100	52.632	ENSJJAG00000023158	-	99	52.278	Jaculus_jaculus
ENSTRUG00000017839	ssb	100	80.402	ENSKMAG00000017317	ssb	100	78.392	Kryptolebias_marmoratus
ENSTRUG00000017839	ssb	100	80.905	ENSLBEG00000017345	ssb	100	80.905	Labrus_bergylta
ENSTRUG00000017839	ssb	100	54.054	ENSLACG00000014056	SSB	99	54.634	Latimeria_chalumnae
ENSTRUG00000017839	ssb	100	65.271	ENSLOCG00000007933	ssb	99	65.025	Lepisosteus_oculatus
ENSTRUG00000017839	ssb	93	55.670	ENSLAFG00000000867	-	99	54.976	Loxodonta_africana
ENSTRUG00000017839	ssb	100	49.876	ENSLAFG00000028909	-	99	48.883	Loxodonta_africana
ENSTRUG00000017839	ssb	75	44.295	ENSLAFG00000026721	-	98	44.295	Loxodonta_africana
ENSTRUG00000017839	ssb	90	49.722	ENSMFAG00000041478	-	90	51.988	Macaca_fascicularis
ENSTRUG00000017839	ssb	100	57.284	ENSMFAG00000039066	SSB	99	56.931	Macaca_fascicularis
ENSTRUG00000017839	ssb	100	57.284	ENSMMUG00000023051	SSB	99	56.931	Macaca_mulatta
ENSTRUG00000017839	ssb	99	42.000	ENSMMUG00000039889	-	98	41.562	Macaca_mulatta
ENSTRUG00000017839	ssb	100	50.617	ENSMMUG00000011724	-	97	50.000	Macaca_mulatta
ENSTRUG00000017839	ssb	90	49.722	ENSMNEG00000034698	-	90	51.988	Macaca_nemestrina
ENSTRUG00000017839	ssb	100	48.655	ENSMNEG00000028321	SSB	85	66.957	Macaca_nemestrina
ENSTRUG00000017839	ssb	100	40.347	ENSMLEG00000042644	-	99	38.958	Mandrillus_leucophaeus
ENSTRUG00000017839	ssb	100	57.284	ENSMLEG00000035717	SSB	99	56.931	Mandrillus_leucophaeus
ENSTRUG00000017839	ssb	100	82.161	ENSMAMG00000004800	ssb	100	79.397	Mastacembelus_armatus
ENSTRUG00000017839	ssb	100	74.559	ENSMZEG00005005749	ssb	100	74.559	Maylandia_zebra
ENSTRUG00000017839	ssb	99	58.374	ENSMGAG00000010328	SSB	100	63.768	Meleagris_gallopavo
ENSTRUG00000017839	ssb	100	58.272	ENSMICG00000028252	-	99	57.921	Microcebus_murinus
ENSTRUG00000017839	ssb	98	52.041	ENSMICG00000033304	-	94	54.447	Microcebus_murinus
ENSTRUG00000017839	ssb	93	54.688	ENSMODG00000008227	-	99	54.988	Monodelphis_domestica
ENSTRUG00000017839	ssb	93	49.330	ENSMODG00000019271	-	99	42.432	Monodelphis_domestica
ENSTRUG00000017839	ssb	100	39.109	ENSMODG00000007027	-	99	39.356	Monodelphis_domestica
ENSTRUG00000017839	ssb	92	77.174	ENSMALG00000008045	ssb	90	81.402	Monopterus_albus
ENSTRUG00000017839	ssb	100	53.828	MGP_CAROLIEiJ_G0023629	-	98	64.331	Mus_caroli
ENSTRUG00000017839	ssb	100	53.589	ENSMUSG00000068882	Ssb	98	64.331	Mus_musculus
ENSTRUG00000017839	ssb	100	53.125	MGP_PahariEiJ_G0025081	-	98	63.694	Mus_pahari
ENSTRUG00000017839	ssb	100	53.589	MGP_SPRETEiJ_G0024551	Ssb	98	64.331	Mus_spretus
ENSTRUG00000017839	ssb	100	58.025	ENSMPUG00000000785	SSB	99	57.426	Mustela_putorius_furo
ENSTRUG00000017839	ssb	100	56.145	ENSMLUG00000016316	SSB	99	55.181	Myotis_lucifugus
ENSTRUG00000017839	ssb	100	73.869	ENSNBRG00000012661	ssb	100	73.869	Neolamprologus_brichardi
ENSTRUG00000017839	ssb	82	47.401	ENSNLEG00000028754	-	77	47.401	Nomascus_leucogenys
ENSTRUG00000017839	ssb	100	57.037	ENSNLEG00000004958	SSB	99	56.683	Nomascus_leucogenys
ENSTRUG00000017839	ssb	63	61.600	ENSMEUG00000001650	-	100	61.600	Notamacropus_eugenii
ENSTRUG00000017839	ssb	93	56.452	ENSODEG00000004202	-	99	55.795	Octodon_degus
ENSTRUG00000017839	ssb	100	75.628	ENSONIG00000008776	ssb	100	75.628	Oreochromis_niloticus
ENSTRUG00000017839	ssb	100	56.683	ENSOANG00000008543	SSB	99	56.188	Ornithorhynchus_anatinus
ENSTRUG00000017839	ssb	100	57.037	ENSOCUG00000010396	SSB	99	56.436	Oryctolagus_cuniculus
ENSTRUG00000017839	ssb	100	77.250	ENSORLG00000017208	ssb	100	76.000	Oryzias_latipes
ENSTRUG00000017839	ssb	100	77.057	ENSORLG00020022574	ssb	100	75.561	Oryzias_latipes_hni
ENSTRUG00000017839	ssb	100	78.250	ENSORLG00015016592	ssb	100	76.500	Oryzias_latipes_hsok
ENSTRUG00000017839	ssb	100	82.500	ENSOMEG00000003193	ssb	100	82.250	Oryzias_melastigma
ENSTRUG00000017839	ssb	100	54.265	ENSOGAG00000029768	SSB	99	53.919	Otolemur_garnettii
ENSTRUG00000017839	ssb	100	57.531	ENSOARG00000002906	SSB	99	56.931	Ovis_aries
ENSTRUG00000017839	ssb	96	45.876	ENSPPAG00000006189	-	95	44.501	Pan_paniscus
ENSTRUG00000017839	ssb	100	48.544	ENSPPAG00000032427	-	100	59.690	Pan_paniscus
ENSTRUG00000017839	ssb	100	56.618	ENSPPAG00000042673	SSB	99	56.265	Pan_paniscus
ENSTRUG00000017839	ssb	100	58.128	ENSPPRG00000006599	SSB	99	57.531	Panthera_pardus
ENSTRUG00000017839	ssb	100	58.128	ENSPTIG00000011021	SSB	97	57.531	Panthera_tigris_altaica
ENSTRUG00000017839	ssb	100	56.618	ENSPTRG00000012620	SSB	99	56.265	Pan_troglodytes
ENSTRUG00000017839	ssb	100	46.173	ENSPTRG00000042880	-	99	46.287	Pan_troglodytes
ENSTRUG00000017839	ssb	93	41.019	ENSPANG00000031877	-	89	40.106	Papio_anubis
ENSTRUG00000017839	ssb	99	41.457	ENSPANG00000034126	-	97	40.806	Papio_anubis
ENSTRUG00000017839	ssb	100	57.284	ENSPANG00000007440	SSB	99	56.931	Papio_anubis
ENSTRUG00000017839	ssb	100	67.164	ENSPKIG00000019325	ssb	99	67.164	Paramormyrops_kingsleyae
ENSTRUG00000017839	ssb	100	56.204	ENSPSIG00000002265	SSB	93	58.824	Pelodiscus_sinensis
ENSTRUG00000017839	ssb	88	71.143	ENSPMGG00000020075	ssb	91	71.714	Periophthalmus_magnuspinnatus
ENSTRUG00000017839	ssb	82	45.897	ENSPMAG00000002982	ssb	90	44.730	Petromyzon_marinus
ENSTRUG00000017839	ssb	99	56.962	ENSPCIG00000028591	-	99	57.037	Phascolarctos_cinereus
ENSTRUG00000017839	ssb	100	79.750	ENSPFOG00000009650	ssb	100	76.500	Poecilia_formosa
ENSTRUG00000017839	ssb	100	79.250	ENSPLAG00000020498	ssb	100	76.500	Poecilia_latipinna
ENSTRUG00000017839	ssb	100	80.000	ENSPMEG00000001051	ssb	100	76.750	Poecilia_mexicana
ENSTRUG00000017839	ssb	93	79.570	ENSPREG00000003708	ssb	97	76.075	Poecilia_reticulata
ENSTRUG00000017839	ssb	100	57.037	ENSPPYG00000012919	SSB	99	56.683	Pongo_abelii
ENSTRUG00000017839	ssb	95	54.974	ENSPCAG00000010276	SSB	99	54.974	Procavia_capensis
ENSTRUG00000017839	ssb	100	55.309	ENSPCOG00000015741	-	92	64.655	Propithecus_coquereli
ENSTRUG00000017839	ssb	100	51.852	ENSPCOG00000023189	-	99	51.485	Propithecus_coquereli
ENSTRUG00000017839	ssb	88	60.000	ENSPVAG00000006615	SSB	98	59.599	Pteropus_vampyrus
ENSTRUG00000017839	ssb	100	74.055	ENSPNYG00000006444	ssb	100	74.055	Pundamilia_nyererei
ENSTRUG00000017839	ssb	100	60.784	ENSPNAG00000011708	ssb	100	60.294	Pygocentrus_nattereri
ENSTRUG00000017839	ssb	100	52.840	ENSRNOG00000011606	AABR07061825.1	99	52.723	Rattus_norvegicus
ENSTRUG00000017839	ssb	100	52.392	ENSRNOG00000007998	Ssb	99	51.559	Rattus_norvegicus
ENSTRUG00000017839	ssb	86	52.422	ENSRBIG00000041608	-	94	50.712	Rhinopithecus_bieti
ENSTRUG00000017839	ssb	94	47.769	ENSRBIG00000041232	-	98	47.368	Rhinopithecus_bieti
ENSTRUG00000017839	ssb	99	41.935	ENSRBIG00000029918	-	98	41.294	Rhinopithecus_bieti
ENSTRUG00000017839	ssb	100	50.611	ENSRBIG00000041972	SSB	88	66.957	Rhinopithecus_bieti
ENSTRUG00000017839	ssb	100	57.284	ENSRROG00000040346	SSB	99	56.931	Rhinopithecus_roxellana
ENSTRUG00000017839	ssb	99	46.650	ENSRROG00000007149	-	98	46.020	Rhinopithecus_roxellana
ENSTRUG00000017839	ssb	86	54.545	ENSRROG00000034102	-	96	50.126	Rhinopithecus_roxellana
ENSTRUG00000017839	ssb	98	48.241	ENSRROG00000031684	-	88	59.459	Rhinopithecus_roxellana
ENSTRUG00000017839	ssb	100	57.284	ENSSBOG00000027204	SSB	99	56.931	Saimiri_boliviensis_boliviensis
ENSTRUG00000017839	ssb	100	57.284	ENSSHAG00000018062	SSB	99	57.284	Sarcophilus_harrisii
ENSTRUG00000017839	ssb	100	66.667	ENSSFOG00015000550	ssb	99	66.667	Scleropages_formosus
ENSTRUG00000017839	ssb	100	78.535	ENSSMAG00000013885	ssb	99	81.989	Scophthalmus_maximus
ENSTRUG00000017839	ssb	100	84.422	ENSSDUG00000020117	ssb	100	84.422	Seriola_dumerili
ENSTRUG00000017839	ssb	100	81.566	ENSSLDG00000002525	ssb	100	81.566	Seriola_lalandi_dorsalis
ENSTRUG00000017839	ssb	95	53.264	ENSSARG00000007747	SSB	99	52.880	Sorex_araneus
ENSTRUG00000017839	ssb	100	59.606	ENSSPUG00000012112	SSB	99	59.606	Sphenodon_punctatus
ENSTRUG00000017839	ssb	100	82.161	ENSSPAG00000005696	ssb	100	79.397	Stegastes_partitus
ENSTRUG00000017839	ssb	94	52.800	ENSSSCG00000015938	SSB	93	52.800	Sus_scrofa
ENSTRUG00000017839	ssb	95	56.995	ENSTGUG00000007942	SSB	99	56.511	Taeniopygia_guttata
ENSTRUG00000017839	ssb	92	88.011	ENSTNIG00000000915	ssb	100	87.123	Tetraodon_nigroviridis
ENSTRUG00000017839	ssb	82	66.957	ENSTBEG00000009056	SSB	81	66.957	Tupaia_belangeri
ENSTRUG00000017839	ssb	100	58.374	ENSTTRG00000002152	SSB	99	57.778	Tursiops_truncatus
ENSTRUG00000017839	ssb	93	59.677	ENSUAMG00000027833	SSB	97	59.030	Ursus_americanus
ENSTRUG00000017839	ssb	100	57.635	ENSUMAG00000013907	SSB	99	57.037	Ursus_maritimus
ENSTRUG00000017839	ssb	100	58.105	ENSVPAG00000007183	SSB	99	57.500	Vicugna_pacos
ENSTRUG00000017839	ssb	100	57.389	ENSVVUG00000016573	SSB	77	56.790	Vulpes_vulpes
ENSTRUG00000017839	ssb	99	52.927	ENSXETG00000025402	ssb	99	52.582	Xenopus_tropicalis
ENSTRUG00000017839	ssb	93	76.613	ENSXCOG00000019109	ssb	97	73.118	Xiphophorus_couchianus
ENSTRUG00000017839	ssb	100	77.419	ENSXMAG00000004888	ssb	100	74.194	Xiphophorus_maculatus