EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000017964 (Gene tree)
Gene ID: 101079466
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 11438 bases
Position: chr16:7617985-7629422
Accession: 101079466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054923	RRM_1	PF00076.22	2.6e-09	1	1
ENSTRUP00000046047	RRM_1	PF00076.22	2.6e-09	1	1
ENSTRUP00000051570	RRM_1	PF00076.22	2.7e-09	1	1
ENSTRUP00000046047	PWI	PF01480.17	1.5e-13	1	1
ENSTRUP00000051570	PWI	PF01480.17	1.6e-13	1	1
ENSTRUP00000054923	PWI	PF01480.17	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000046201	-	2346	-	ENSTRUP00000046047	781 (aa)	-	H2VA07
ENSTRUT00000058218	-	6835	-	ENSTRUP00000054923	766 (aa)	-	-
ENSTRUT00000056797	-	6612	XM_011612120	ENSTRUP00000051570	798 (aa)	XP_011610422	UPI0005D1DA7D

Gene Model

Click here to download ENSTRUG00000017964's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000017964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000017964	rbm25b	58	72.479	ENSTRUG00000003076	rbm25a	63	68.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000017964	rbm25b	52	77.724	ENSG00000119707	RBM25	100	66.929	Homo_sapiens
ENSTRUG00000017964	rbm25b	56	76.840	ENSAPOG00000017757	rbm25a	60	75.427	Acanthochromis_polyacanthus
ENSTRUG00000017964	rbm25b	58	91.649	ENSAPOG00000015321	rbm25b	100	89.356	Acanthochromis_polyacanthus
ENSTRUG00000017964	rbm25b	52	77.913	ENSAMEG00000016270	RBM25	85	76.674	Ailuropoda_melanoleuca
ENSTRUG00000017964	rbm25b	58	88.437	ENSACIG00000014178	rbm25b	57	86.567	Amphilophus_citrinellus
ENSTRUG00000017964	rbm25b	56	77.533	ENSACIG00000019482	rbm25a	57	74.310	Amphilophus_citrinellus
ENSTRUG00000017964	rbm25b	53	80.142	ENSAOCG00000013695	rbm25a	55	79.215	Amphiprion_ocellaris
ENSTRUG00000017964	rbm25b	58	86.141	ENSAOCG00000019308	rbm25b	57	86.141	Amphiprion_ocellaris
ENSTRUG00000017964	rbm25b	53	80.142	ENSAPEG00000007514	rbm25a	56	79.215	Amphiprion_percula
ENSTRUG00000017964	rbm25b	100	88.848	ENSAPEG00000009666	rbm25b	60	89.339	Amphiprion_percula
ENSTRUG00000017964	rbm25b	58	92.043	ENSATEG00000017312	rbm25b	58	92.043	Anabas_testudineus
ENSTRUG00000017964	rbm25b	58	76.160	ENSATEG00000020676	rbm25a	63	74.332	Anabas_testudineus
ENSTRUG00000017964	rbm25b	52	79.710	ENSAPLG00000006643	RBM25	58	75.108	Anas_platyrhynchos
ENSTRUG00000017964	rbm25b	52	77.724	ENSANAG00000028295	RBM25	98	68.056	Aotus_nancymaae
ENSTRUG00000017964	rbm25b	58	92.934	ENSACLG00000024359	rbm25b	58	92.751	Astatotilapia_calliptera
ENSTRUG00000017964	rbm25b	90	75.108	ENSACLG00000027482	rbm25a	90	74.353	Astatotilapia_calliptera
ENSTRUG00000017964	rbm25b	52	77.724	ENSBTAG00000017177	RBM25	85	76.674	Bos_taurus
ENSTRUG00000017964	rbm25b	55	34.607	WBGene00012245	W04D2.6	84	34.157	Caenorhabditis_elegans
ENSTRUG00000017964	rbm25b	52	77.724	ENSCJAG00000014441	-	98	68.403	Callithrix_jacchus
ENSTRUG00000017964	rbm25b	52	78.208	ENSTSYG00000003024	RBM25	98	68.403	Carlito_syrichta
ENSTRUG00000017964	rbm25b	52	78.453	ENSCAPG00000005239	RBM25	78	61.033	Cavia_aperea
ENSTRUG00000017964	rbm25b	52	77.724	ENSCPOG00000002479	RBM25	85	76.674	Cavia_porcellus
ENSTRUG00000017964	rbm25b	52	77.724	ENSCATG00000039651	RBM25	98	68.403	Cercocebus_atys
ENSTRUG00000017964	rbm25b	52	77.724	ENSCLAG00000003977	RBM25	85	76.674	Chinchilla_lanigera
ENSTRUG00000017964	rbm25b	52	77.724	ENSCSAG00000012801	RBM25	85	76.674	Chlorocebus_sabaeus
ENSTRUG00000017964	rbm25b	65	82.432	ENSCHOG00000008903	RBM25	63	81.690	Choloepus_hoffmanni
ENSTRUG00000017964	rbm25b	52	70.460	ENSCANG00000043874	RBM25	98	68.403	Colobus_angolensis_palliatus
ENSTRUG00000017964	rbm25b	99	65.524	ENSCGRG00001020817	Rbm25	100	65.728	Cricetulus_griseus_chok1gshd
ENSTRUG00000017964	rbm25b	59	87.553	ENSCSEG00000020737	rbm25b	58	88.437	Cynoglossus_semilaevis
ENSTRUG00000017964	rbm25b	57	73.218	ENSCSEG00000009430	rbm25a	61	68.600	Cynoglossus_semilaevis
ENSTRUG00000017964	rbm25b	59	85.300	ENSCVAG00000003478	rbm25b	100	85.117	Cyprinodon_variegatus
ENSTRUG00000017964	rbm25b	70	80.153	ENSCVAG00000005498	rbm25a	99	77.198	Cyprinodon_variegatus
ENSTRUG00000017964	rbm25b	65	76.437	ENSDARG00000006395	rbm25b	58	73.760	Danio_rerio
ENSTRUG00000017964	rbm25b	51	69.554	ENSDARG00000039266	rbm25a	99	91.139	Danio_rerio
ENSTRUG00000017964	rbm25b	52	77.482	ENSDNOG00000004959	RBM25	85	76.443	Dasypus_novemcinctus
ENSTRUG00000017964	rbm25b	52	77.482	ENSDORG00000013247	Rbm25	84	76.443	Dipodomys_ordii
ENSTRUG00000017964	rbm25b	90	75.676	FBgn0028474	CG4119	73	70.866	Drosophila_melanogaster
ENSTRUG00000017964	rbm25b	52	78.870	ENSETEG00000015941	RBM25	85	77.283	Echinops_telfairi
ENSTRUG00000017964	rbm25b	75	38.119	ENSEBUG00000002963	rbm25b	65	40.865	Eptatretus_burgeri
ENSTRUG00000017964	rbm25b	84	76.716	ENSEEUG00000007350	RBM25	81	76.961	Erinaceus_europaeus
ENSTRUG00000017964	rbm25b	54	68.650	ENSELUG00000021847	rbm25a	52	68.372	Esox_lucius
ENSTRUG00000017964	rbm25b	58	77.273	ENSELUG00000007730	rbm25b	51	84.064	Esox_lucius
ENSTRUG00000017964	rbm25b	52	77.724	ENSFCAG00000011716	RBM25	98	68.403	Felis_catus
ENSTRUG00000017964	rbm25b	52	78.744	ENSFALG00000005445	RBM25	85	77.701	Ficedula_albicollis
ENSTRUG00000017964	rbm25b	52	77.724	ENSFDAG00000006542	RBM25	85	76.674	Fukomys_damarensis
ENSTRUG00000017964	rbm25b	58	88.723	ENSFHEG00000003513	rbm25b	59	88.559	Fundulus_heteroclitus
ENSTRUG00000017964	rbm25b	55	72.877	ENSFHEG00000005318	rbm25a	51	82.661	Fundulus_heteroclitus
ENSTRUG00000017964	rbm25b	81	70.563	ENSGMOG00000014070	rbm25a	82	78.238	Gadus_morhua
ENSTRUG00000017964	rbm25b	96	58.935	ENSGMOG00000014097	rbm25b	56	78.667	Gadus_morhua
ENSTRUG00000017964	rbm25b	100	71.323	ENSGAFG00000018036	rbm25a	54	69.080	Gambusia_affinis
ENSTRUG00000017964	rbm25b	97	86.335	ENSGAFG00000001092	rbm25b	52	88.223	Gambusia_affinis
ENSTRUG00000017964	rbm25b	52	77.724	ENSGGOG00000002415	RBM25	98	68.403	Gorilla_gorilla
ENSTRUG00000017964	rbm25b	56	76.872	ENSHBUG00000016908	rbm25a	57	75.636	Haplochromis_burtoni
ENSTRUG00000017964	rbm25b	58	92.934	ENSHBUG00000018499	rbm25b	58	92.751	Haplochromis_burtoni
ENSTRUG00000017964	rbm25b	52	77.724	ENSHGLG00000014745	RBM25	85	76.674	Heterocephalus_glaber_female
ENSTRUG00000017964	rbm25b	52	78.155	ENSHGLG00100018236	-	94	74.317	Heterocephalus_glaber_male
ENSTRUG00000017964	rbm25b	100	79.090	ENSHCOG00000000142	rbm25b	99	80.584	Hippocampus_comes
ENSTRUG00000017964	rbm25b	59	70.860	ENSIPUG00000021051	rbm25b	55	80.000	Ictalurus_punctatus
ENSTRUG00000017964	rbm25b	52	77.724	ENSSTOG00000011117	RBM25	85	76.674	Ictidomys_tridecemlineatus
ENSTRUG00000017964	rbm25b	57	90.175	ENSKMAG00000018826	rbm25b	58	89.979	Kryptolebias_marmoratus
ENSTRUG00000017964	rbm25b	60	70.884	ENSKMAG00000016242	rbm25a	57	76.376	Kryptolebias_marmoratus
ENSTRUG00000017964	rbm25b	100	89.299	ENSLBEG00000010667	rbm25b	58	90.638	Labrus_bergylta
ENSTRUG00000017964	rbm25b	63	69.920	ENSLACG00000011845	RBM25	56	75.983	Latimeria_chalumnae
ENSTRUG00000017964	rbm25b	58	73.573	ENSLOCG00000014196	rbm25b	57	74.409	Lepisosteus_oculatus
ENSTRUG00000017964	rbm25b	52	77.724	ENSMFAG00000040040	RBM25	98	68.403	Macaca_fascicularis
ENSTRUG00000017964	rbm25b	52	77.724	ENSMMUG00000002332	RBM25	100	75.542	Macaca_mulatta
ENSTRUG00000017964	rbm25b	52	77.724	ENSMNEG00000032922	RBM25	84	76.674	Macaca_nemestrina
ENSTRUG00000017964	rbm25b	52	77.724	ENSMLEG00000035157	RBM25	98	68.403	Mandrillus_leucophaeus
ENSTRUG00000017964	rbm25b	58	90.792	ENSMAMG00000004524	rbm25b	58	89.722	Mastacembelus_armatus
ENSTRUG00000017964	rbm25b	50	77.531	ENSMAMG00000000165	rbm25a	61	68.951	Mastacembelus_armatus
ENSTRUG00000017964	rbm25b	58	92.934	ENSMZEG00005001453	rbm25b	58	92.751	Maylandia_zebra
ENSTRUG00000017964	rbm25b	56	76.872	ENSMZEG00005011183	rbm25a	60	74.353	Maylandia_zebra
ENSTRUG00000017964	rbm25b	52	79.419	ENSMGAG00000011707	RBM25	54	75.599	Meleagris_gallopavo
ENSTRUG00000017964	rbm25b	52	77.724	ENSMICG00000034082	RBM25	98	68.056	Microcebus_murinus
ENSTRUG00000017964	rbm25b	52	77.724	ENSMOCG00000001935	Rbm25	84	76.674	Microtus_ochrogaster
ENSTRUG00000017964	rbm25b	58	76.078	ENSMMOG00000009065	rbm25a	58	74.946	Mola_mola
ENSTRUG00000017964	rbm25b	100	80.099	ENSMMOG00000015545	rbm25b	63	92.111	Mola_mola
ENSTRUG00000017964	rbm25b	52	78.208	ENSMODG00000006820	RBM25	84	77.136	Monodelphis_domestica
ENSTRUG00000017964	rbm25b	59	89.540	ENSMALG00000020441	rbm25b	90	90.021	Monopterus_albus
ENSTRUG00000017964	rbm25b	52	77.724	MGP_CAROLIEiJ_G0017921	Rbm25	94	73.224	Mus_caroli
ENSTRUG00000017964	rbm25b	52	77.724	ENSMUSG00000010608	Rbm25	94	73.224	Mus_musculus
ENSTRUG00000017964	rbm25b	52	77.724	MGP_PahariEiJ_G0029677	Rbm25	94	73.224	Mus_pahari
ENSTRUG00000017964	rbm25b	55	73.227	MGP_SPRETEiJ_G0018766	-	94	73.224	Mus_spretus
ENSTRUG00000017964	rbm25b	52	77.724	ENSMPUG00000003698	RBM25	81	76.674	Mustela_putorius_furo
ENSTRUG00000017964	rbm25b	52	72.639	ENSMLUG00000024167	-	55	68.398	Myotis_lucifugus
ENSTRUG00000017964	rbm25b	54	73.193	ENSMLUG00000015434	-	51	73.660	Myotis_lucifugus
ENSTRUG00000017964	rbm25b	52	77.724	ENSNGAG00000018465	Rbm25	85	76.674	Nannospalax_galili
ENSTRUG00000017964	rbm25b	58	85.653	ENSNBRG00000022192	rbm25b	56	85.501	Neolamprologus_brichardi
ENSTRUG00000017964	rbm25b	56	76.872	ENSNBRG00000003761	rbm25a	57	75.636	Neolamprologus_brichardi
ENSTRUG00000017964	rbm25b	52	77.724	ENSNLEG00000002701	RBM25	98	68.403	Nomascus_leucogenys
ENSTRUG00000017964	rbm25b	50	82.857	ENSOPRG00000016744	-	57	79.310	Ochotona_princeps
ENSTRUG00000017964	rbm25b	52	78.450	ENSOANG00000001056	RBM25	83	77.367	Ornithorhynchus_anatinus
ENSTRUG00000017964	rbm25b	100	62.985	ENSOCUG00000013737	RBM25	85	76.674	Oryctolagus_cuniculus
ENSTRUG00000017964	rbm25b	58	87.288	ENSORLG00000011874	rbm25b	58	87.288	Oryzias_latipes
ENSTRUG00000017964	rbm25b	58	87.500	ENSORLG00020016422	rbm25b	58	87.500	Oryzias_latipes_hni
ENSTRUG00000017964	rbm25b	58	87.500	ENSORLG00015011269	rbm25b	58	87.500	Oryzias_latipes_hsok
ENSTRUG00000017964	rbm25b	74	66.296	ENSORLG00015022499	rbm25a	54	63.636	Oryzias_latipes_hsok
ENSTRUG00000017964	rbm25b	58	86.966	ENSOMEG00000023172	rbm25b	90	86.434	Oryzias_melastigma
ENSTRUG00000017964	rbm25b	53	72.566	ENSOMEG00000022138	rbm25a	59	72.211	Oryzias_melastigma
ENSTRUG00000017964	rbm25b	52	77.724	ENSOARG00000000319	RBM25	85	76.674	Ovis_aries
ENSTRUG00000017964	rbm25b	52	77.724	ENSPPAG00000039402	RBM25	98	68.403	Pan_paniscus
ENSTRUG00000017964	rbm25b	52	77.724	ENSPPRG00000017374	RBM25	98	68.403	Panthera_pardus
ENSTRUG00000017964	rbm25b	52	77.724	ENSPTIG00000017309	RBM25	98	68.403	Panthera_tigris_altaica
ENSTRUG00000017964	rbm25b	52	77.724	ENSPTRG00000006509	RBM25	98	68.403	Pan_troglodytes
ENSTRUG00000017964	rbm25b	52	77.724	ENSPANG00000018212	RBM25	98	68.403	Papio_anubis
ENSTRUG00000017964	rbm25b	58	74.423	ENSPKIG00000003203	rbm25b	57	75.105	Paramormyrops_kingsleyae
ENSTRUG00000017964	rbm25b	52	77.966	ENSPSIG00000006058	RBM25	85	77.650	Pelodiscus_sinensis
ENSTRUG00000017964	rbm25b	59	84.583	ENSPMGG00000015740	rbm25b	58	84.110	Periophthalmus_magnuspinnatus
ENSTRUG00000017964	rbm25b	50	68.329	ENSPMGG00000001791	rbm25a	100	68.281	Periophthalmus_magnuspinnatus
ENSTRUG00000017964	rbm25b	52	71.186	ENSPCIG00000011166	RBM25	53	70.901	Phascolarctos_cinereus
ENSTRUG00000017964	rbm25b	58	87.917	ENSPFOG00000018808	rbm25b	100	82.310	Poecilia_formosa
ENSTRUG00000017964	rbm25b	100	71.975	ENSPLAG00000018338	rbm25a	52	80.859	Poecilia_latipinna
ENSTRUG00000017964	rbm25b	58	87.708	ENSPMEG00000019161	rbm25b	100	82.310	Poecilia_mexicana
ENSTRUG00000017964	rbm25b	100	71.852	ENSPMEG00000024470	rbm25a	52	82.143	Poecilia_mexicana
ENSTRUG00000017964	rbm25b	56	76.549	ENSPREG00000009228	rbm25a	58	75.055	Poecilia_reticulata
ENSTRUG00000017964	rbm25b	58	87.552	ENSPREG00000008522	rbm25b	100	82.113	Poecilia_reticulata
ENSTRUG00000017964	rbm25b	80	77.913	ENSPCAG00000006226	RBM25	78	76.674	Procavia_capensis
ENSTRUG00000017964	rbm25b	52	77.724	ENSPCOG00000023107	RBM25	98	68.403	Propithecus_coquereli
ENSTRUG00000017964	rbm25b	52	77.724	ENSPVAG00000003931	RBM25	85	76.674	Pteropus_vampyrus
ENSTRUG00000017964	rbm25b	59	73.474	ENSPNYG00000022596	rbm25a	57	74.353	Pundamilia_nyererei
ENSTRUG00000017964	rbm25b	58	85.439	ENSPNYG00000023303	rbm25b	57	85.288	Pundamilia_nyererei
ENSTRUG00000017964	rbm25b	59	76.101	ENSPNAG00000012024	rbm25b	57	77.070	Pygocentrus_nattereri
ENSTRUG00000017964	rbm25b	52	76.998	ENSRNOG00000002871	Rbm25l1	56	72.650	Rattus_norvegicus
ENSTRUG00000017964	rbm25b	52	77.724	ENSRBIG00000039904	RBM25	98	68.403	Rhinopithecus_bieti
ENSTRUG00000017964	rbm25b	52	77.724	ENSRROG00000035556	RBM25	97	77.348	Rhinopithecus_roxellana
ENSTRUG00000017964	rbm25b	62	79.583	ENSSBOG00000034153	RBM25	52	58.352	Saimiri_boliviensis_boliviensis
ENSTRUG00000017964	rbm25b	52	78.208	ENSSHAG00000012859	RBM25	85	77.136	Sarcophilus_harrisii
ENSTRUG00000017964	rbm25b	58	75.319	ENSSFOG00015007093	rbm25	58	75.687	Scleropages_formosus
ENSTRUG00000017964	rbm25b	58	75.316	ENSSMAG00000009745	rbm25a	58	73.695	Scophthalmus_maximus
ENSTRUG00000017964	rbm25b	59	84.583	ENSSMAG00000002520	rbm25b	58	85.201	Scophthalmus_maximus
ENSTRUG00000017964	rbm25b	56	77.657	ENSSDUG00000017984	rbm25a	58	75.574	Seriola_dumerili
ENSTRUG00000017964	rbm25b	57	92.795	ENSSLDG00000024573	rbm25b	100	92.795	Seriola_lalandi_dorsalis
ENSTRUG00000017964	rbm25b	56	77.657	ENSSLDG00000010342	rbm25a	57	75.574	Seriola_lalandi_dorsalis
ENSTRUG00000017964	rbm25b	52	77.724	ENSSARG00000002327	RBM25	85	76.674	Sorex_araneus
ENSTRUG00000017964	rbm25b	91	89.189	ENSSPAG00000016168	rbm25b	58	91.295	Stegastes_partitus
ENSTRUG00000017964	rbm25b	56	75.372	ENSSPAG00000011114	rbm25a	58	75.154	Stegastes_partitus
ENSTRUG00000017964	rbm25b	52	78.261	ENSTGUG00000011246	-	85	77.241	Taeniopygia_guttata
ENSTRUG00000017964	rbm25b	96	83.312	ENSTNIG00000012222	rbm25b	74	87.580	Tetraodon_nigroviridis
ENSTRUG00000017964	rbm25b	58	79.365	ENSTBEG00000010538	-	55	79.839	Tupaia_belangeri
ENSTRUG00000017964	rbm25b	55	67.963	ENSUAMG00000007707	RBM25	100	75.542	Ursus_americanus
ENSTRUG00000017964	rbm25b	90	66.129	ENSVPAG00000009052	RBM25	86	68.966	Vicugna_pacos
ENSTRUG00000017964	rbm25b	52	77.724	ENSVVUG00000004426	RBM25	83	76.674	Vulpes_vulpes
ENSTRUG00000017964	rbm25b	96	64.015	ENSXETG00000021857	rbm25	58	74.672	Xenopus_tropicalis
ENSTRUG00000017964	rbm25b	100	71.253	ENSXCOG00000004043	RBM25	58	73.019	Xiphophorus_couchianus
ENSTRUG00000017964	rbm25b	100	80.202	ENSXCOG00000002222	rbm25b	100	82.807	Xiphophorus_couchianus
ENSTRUG00000017964	rbm25b	100	86.731	ENSXMAG00000017290	rbm25b	59	87.654	Xiphophorus_maculatus