EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000018104 (Gene tree)
Gene ID: 101070858
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1127 bases
Position: chrHE591789.1:192902-194028
Accession: 101070858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000046346	RRM_1	PF00076.22	7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000046503	-	933	XM_003978155	ENSTRUP00000046346	229 (aa)	XP_003978204	H2VAV4

Gene Model

Click here to download ENSTRUG00000018104's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG
tru05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000018104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000018104	srsf2a	53	86.066	ENSTRUG00000024363	srsf2b	50	87.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000018104	srsf2a	55	82.031	ENSAPOG00000008073	srsf2b	53	85.345	Acanthochromis_polyacanthus
ENSTRUG00000018104	srsf2a	50	99.123	ENSAOCG00000021878	srsf2a	52	99.123	Amphiprion_ocellaris
ENSTRUG00000018104	srsf2a	50	99.123	ENSAPEG00000023494	srsf2a	52	99.123	Amphiprion_percula
ENSTRUG00000018104	srsf2a	50	92.241	ENSACAG00000008553	-	52	92.241	Anolis_carolinensis
ENSTRUG00000018104	srsf2a	50	97.368	ENSACLG00000027016	srsf2a	50	97.368	Astatotilapia_calliptera
ENSTRUG00000018104	srsf2a	99	58.952	ENSCHOG00000014019	-	53	90.741	Choloepus_hoffmanni
ENSTRUG00000018104	srsf2a	67	55.844	ENSCING00000004198	-	57	79.787	Ciona_intestinalis
ENSTRUG00000018104	srsf2a	94	66.047	ENSDARG00000057484	srsf2a	100	96.610	Danio_rerio
ENSTRUG00000018104	srsf2a	71	66.667	ENSDORG00000014460	Srsf2	53	88.073	Dipodomys_ordii
ENSTRUG00000018104	srsf2a	51	87.179	ENSFALG00000000869	-	50	90.826	Ficedula_albicollis
ENSTRUG00000018104	srsf2a	50	92.241	ENSGALG00000017357	SRSF2	52	92.241	Gallus_gallus
ENSTRUG00000018104	srsf2a	71	68.519	ENSGGOG00000014378	SRSF2	53	93.578	Gorilla_gorilla
ENSTRUG00000018104	srsf2a	50	97.368	ENSHBUG00000013254	srsf2a	50	97.368	Haplochromis_burtoni
ENSTRUG00000018104	srsf2a	50	92.982	ENSLOCG00000011252	srsf2a	53	92.982	Lepisosteus_oculatus
ENSTRUG00000018104	srsf2a	50	97.368	ENSMZEG00005004205	srsf2a	50	97.368	Maylandia_zebra
ENSTRUG00000018104	srsf2a	50	98.246	ENSMMOG00000020751	srsf2a	53	98.246	Mola_mola
ENSTRUG00000018104	srsf2a	50	99.123	ENSMALG00000012956	srsf2a	50	99.123	Monopterus_albus
ENSTRUG00000018104	srsf2a	52	57.143	ENSMLUG00000026613	-	52	58.879	Myotis_lucifugus
ENSTRUG00000018104	srsf2a	50	92.105	ENSPKIG00000023128	-	50	92.105	Paramormyrops_kingsleyae
ENSTRUG00000018104	srsf2a	91	65.566	ENSPMGG00000010911	srsf2a	56	91.453	Periophthalmus_magnuspinnatus
ENSTRUG00000018104	srsf2a	50	97.368	ENSPNYG00000001148	srsf2a	50	97.368	Pundamilia_nyererei
ENSTRUG00000018104	srsf2a	75	75.581	ENSSFOG00015003975	-	50	95.575	Scleropages_formosus
ENSTRUG00000018104	srsf2a	54	93.548	ENSSDUG00000013865	srsf2a	50	99.107	Seriola_dumerili
ENSTRUG00000018104	srsf2a	54	93.548	ENSSLDG00000017717	srsf2a	50	99.107	Seriola_lalandi_dorsalis
ENSTRUG00000018104	srsf2a	62	63.194	ENSSSCG00000012212	-	52	73.529	Sus_scrofa
ENSTRUG00000018104	srsf2a	50	91.379	ENSTGUG00000007799	-	52	91.379	Taeniopygia_guttata
ENSTRUG00000018104	srsf2a	50	100.000	ENSTNIG00000001280	srsf2a	51	100.000	Tetraodon_nigroviridis
ENSTRUG00000018104	srsf2a	50	92.982	ENSXETG00000025271	srsf2	52	92.982	Xenopus_tropicalis
ENSTRUG00000018104	srsf2a	50	99.123	ENSXCOG00000005917	srsf2a	52	99.123	Xiphophorus_couchianus