EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000018490 (Gene tree)
Gene ID
101062686
Gene Symbol
sbno1
Alias
-
Full Name
strawberry notch homolog 1
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
11706 bases
Position
chr6:5976842-5988547
Accession
101062686
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000047334ResIIIPF04851.153e-0711
ENSTRUP00000052880ResIIIPF04851.153.1e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000047494-3978-ENSTRUP000000473341325 (aa)-H2VDN9
ENSTRUT00000052143-6578XM_011604742ENSTRUP000000528801402 (aa)XP_011603044UPI0005D29D28
Gene Model
Click here to download ENSTRUG00000018490's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000018490's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000018490sbno17360.000ENSTRUG00000018193si:ch73-63e15.27560.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000018490sbno19975.877ENSG00000139697SBNO19975.581Homo_sapiens
ENSTRUG00000018490sbno18690.052ENSAPOG00000003196sbno19889.817Acanthochromis_polyacanthus
ENSTRUG00000018490sbno19975.594ENSAMEG00000015151SBNO19975.421Ailuropoda_melanoleuca
ENSTRUG00000018490sbno19986.776ENSACIG00000008088sbno19986.850Amphilophus_citrinellus
ENSTRUG00000018490sbno19987.429ENSAOCG00000014859sbno19887.216Amphiprion_ocellaris
ENSTRUG00000018490sbno19987.429ENSAPEG00000006069sbno19887.216Amphiprion_percula
ENSTRUG00000018490sbno19988.407ENSATEG00000006667sbno19988.265Anabas_testudineus
ENSTRUG00000018490sbno19875.951ENSAPLG00000015674SBNO19976.079Anas_platyrhynchos
ENSTRUG00000018490sbno19876.627ENSACAG00000015441SBNO18876.274Anolis_carolinensis
ENSTRUG00000018490sbno19584.307ENSANAG00000029958-9983.725Aotus_nancymaae
ENSTRUG00000018490sbno19984.524ENSACLG00000024913sbno19984.970Astatotilapia_calliptera
ENSTRUG00000018490sbno19980.299ENSAMXG00000019473sbno19980.100Astyanax_mexicanus
ENSTRUG00000018490sbno19977.223ENSBTAG00000020505SBNO19977.256Bos_taurus
ENSTRUG00000018490sbno19975.615ENSCJAG00000016599SBNO19975.440Callithrix_jacchus
ENSTRUG00000018490sbno19975.507ENSCAFG00000007503SBNO19188.817Canis_familiaris
ENSTRUG00000018490sbno19582.299ENSCAFG00020015363SBNO19982.299Canis_lupus_dingo
ENSTRUG00000018490sbno19584.783ENSCHIG00000008382SBNO19984.783Capra_hircus
ENSTRUG00000018490sbno19977.143ENSTSYG00000012749SBNO19978.205Carlito_syrichta
ENSTRUG00000018490sbno19184.629ENSCAPG00000000384SBNO19984.629Cavia_aperea
ENSTRUG00000018490sbno19584.629ENSCPOG00000008109SBNO19984.629Cavia_porcellus
ENSTRUG00000018490sbno19972.967ENSCCAG00000035316SBNO19973.533Cebus_capucinus
ENSTRUG00000018490sbno19284.672ENSCATG00000008239SBNO19784.672Cercocebus_atys
ENSTRUG00000018490sbno19584.810ENSCLAG00000008995SBNO19984.810Chinchilla_lanigera
ENSTRUG00000018490sbno18682.115ENSCSAG00000002064SBNO19981.912Chlorocebus_sabaeus
ENSTRUG00000018490sbno19672.923ENSCHOG00000008814SBNO19572.710Choloepus_hoffmanni
ENSTRUG00000018490sbno19877.222ENSCPBG00000025968SBNO19877.206Chrysemys_picta_bellii
ENSTRUG00000018490sbno19972.199ENSCANG00000042688-9971.890Colobus_angolensis_palliatus
ENSTRUG00000018490sbno19975.088ENSCGRG00001017470Sbno19983.577Cricetulus_griseus_chok1gshd
ENSTRUG00000018490sbno19975.088ENSCGRG00000004756Sbno19983.577Cricetulus_griseus_crigri
ENSTRUG00000018490sbno19986.354ENSCSEG00000011919sbno19985.999Cynoglossus_semilaevis
ENSTRUG00000018490sbno19987.402ENSCVAG00000007038sbno19986.752Cyprinodon_variegatus
ENSTRUG00000018490sbno19980.498ENSDARG00000099080sbno19980.285Danio_rerio
ENSTRUG00000018490sbno19978.585ENSDNOG00000017147SBNO19678.585Dasypus_novemcinctus
ENSTRUG00000018490sbno19580.269ENSDORG00000015261Sbno19980.396Dipodomys_ordii
ENSTRUG00000018490sbno19372.063ENSETEG00000005620SBNO19372.063Echinops_telfairi
ENSTRUG00000018490sbno17464.723ENSEBUG00000013823sbno19363.398Eptatretus_burgeri
ENSTRUG00000018490sbno15271.683ENSEASG00005012595-9276.246Equus_asinus_asinus
ENSTRUG00000018490sbno19777.962ENSECAG00000006127SBNO19976.270Equus_caballus
ENSTRUG00000018490sbno18377.654ENSEEUG00000003793SBNO18277.654Erinaceus_europaeus
ENSTRUG00000018490sbno19980.581ENSELUG00000002886sbno19981.586Esox_lucius
ENSTRUG00000018490sbno110075.542ENSFCAG00000015331SBNO19975.368Felis_catus
ENSTRUG00000018490sbno19875.879ENSFALG00000009273SBNO19976.221Ficedula_albicollis
ENSTRUG00000018490sbno19581.569ENSFDAG00000014232SBNO19981.455Fukomys_damarensis
ENSTRUG00000018490sbno19986.610ENSFHEG00000007360sbno19986.254Fundulus_heteroclitus
ENSTRUG00000018490sbno19683.500ENSGMOG00000018229sbno19983.459Gadus_morhua
ENSTRUG00000018490sbno18876.077ENSGALG00000003392SBNO19976.137Gallus_gallus
ENSTRUG00000018490sbno19986.548ENSGAFG00000003960sbno19986.335Gambusia_affinis
ENSTRUG00000018490sbno19785.236ENSGACG00000015633sbno110085.971Gasterosteus_aculeatus
ENSTRUG00000018490sbno19876.912ENSGAGG00000001065SBNO19976.900Gopherus_agassizii
ENSTRUG00000018490sbno19584.448ENSGGOG00000015000SBNO19984.448Gorilla_gorilla
ENSTRUG00000018490sbno19978.799ENSHBUG00000011910sbno19978.873Haplochromis_burtoni
ENSTRUG00000018490sbno19584.854ENSHGLG00000014165-9984.144Heterocephalus_glaber_female
ENSTRUG00000018490sbno19190.079ENSHCOG00000003246sbno19590.079Hippocampus_comes
ENSTRUG00000018490sbno19980.939ENSIPUG00000015830Sbno19881.450Ictalurus_punctatus
ENSTRUG00000018490sbno19584.854ENSSTOG00000023221SBNO19984.854Ictidomys_tridecemlineatus
ENSTRUG00000018490sbno19580.474ENSJJAG00000001741Sbno19980.474Jaculus_jaculus
ENSTRUG00000018490sbno19986.994ENSKMAG00000009696sbno19986.496Kryptolebias_marmoratus
ENSTRUG00000018490sbno19987.943ENSLBEG00000007623sbno19987.739Labrus_bergylta
ENSTRUG00000018490sbno19972.375ENSLACG00000017227SBNO19973.927Latimeria_chalumnae
ENSTRUG00000018490sbno19980.283ENSLOCG00000005725sbno19779.788Lepisosteus_oculatus
ENSTRUG00000018490sbno19975.053ENSLAFG00000002135SBNO19975.299Loxodonta_africana
ENSTRUG00000018490sbno19581.408ENSMFAG00000031429SBNO19981.408Macaca_fascicularis
ENSTRUG00000018490sbno19581.408ENSMMUG00000011496SBNO19981.408Macaca_mulatta
ENSTRUG00000018490sbno19584.672ENSMLEG00000033260SBNO19984.672Mandrillus_leucophaeus
ENSTRUG00000018490sbno19987.989ENSMAMG00000005473sbno19987.633Mastacembelus_armatus
ENSTRUG00000018490sbno19875.954ENSMGAG00000003274SBNO19976.187Meleagris_gallopavo
ENSTRUG00000018490sbno15172.486ENSMAUG00000004834-9976.727Mesocricetus_auratus
ENSTRUG00000018490sbno19581.387ENSMICG00000006573-9980.832Microcebus_murinus
ENSTRUG00000018490sbno19584.087ENSMOCG00000009390Sbno19984.087Microtus_ochrogaster
ENSTRUG00000018490sbno19987.155ENSMMOG00000008691sbno19986.482Mola_mola
ENSTRUG00000018490sbno110075.176ENSMODG00000012470SBNO19875.088Monodelphis_domestica
ENSTRUG00000018490sbno19987.163ENSMALG00000001056sbno19986.525Monopterus_albus
ENSTRUG00000018490sbno110075.474MGP_CAROLIEiJ_G0027749Sbno19590.789Mus_caroli
ENSTRUG00000018490sbno110075.404ENSMUSG00000038095Sbno19490.789Mus_musculus
ENSTRUG00000018490sbno110075.704MGP_PahariEiJ_G0024329Sbno19590.789Mus_pahari
ENSTRUG00000018490sbno110075.299MGP_SPRETEiJ_G0028747Sbno19590.789Mus_spretus
ENSTRUG00000018490sbno19975.683ENSMPUG00000001658SBNO19975.510Mustela_putorius_furo
ENSTRUG00000018490sbno19975.387ENSMLUG00000017159SBNO19975.282Myotis_lucifugus
ENSTRUG00000018490sbno19285.771ENSNGAG00000012620Sbno19785.771Nannospalax_galili
ENSTRUG00000018490sbno19985.130ENSNBRG00000019189sbno19985.204Neolamprologus_brichardi
ENSTRUG00000018490sbno19974.069ENSNLEG00000001502SBNO19976.277Nomascus_leucogenys
ENSTRUG00000018490sbno16373.418ENSMEUG00000008768-9376.730Notamacropus_eugenii
ENSTRUG00000018490sbno19974.473ENSOPRG00000011054SBNO19974.560Ochotona_princeps
ENSTRUG00000018490sbno19584.810ENSODEG00000009997SBNO19984.810Octodon_degus
ENSTRUG00000018490sbno19986.842ENSONIG00000015348sbno19987.411Oreochromis_niloticus
ENSTRUG00000018490sbno19874.609ENSOCUG00000002441SBNO19574.643Oryctolagus_cuniculus
ENSTRUG00000018490sbno19985.979ENSORLG00000001593sbno19986.415Oryzias_latipes
ENSTRUG00000018490sbno19986.325ENSORLG00020015216sbno19986.477Oryzias_latipes_hni
ENSTRUG00000018490sbno19986.396ENSORLG00015002726sbno19986.548Oryzias_latipes_hsok
ENSTRUG00000018490sbno19986.101ENSOMEG00000019313sbno19986.244Oryzias_melastigma
ENSTRUG00000018490sbno15170.694ENSOGAG00000010781-9975.149Otolemur_garnettii
ENSTRUG00000018490sbno19975.653ENSOARG00000004404SBNO19975.565Ovis_aries
ENSTRUG00000018490sbno19584.448ENSPPAG00000024635SBNO19984.448Pan_paniscus
ENSTRUG00000018490sbno110075.542ENSPPRG00000022092SBNO19975.368Panthera_pardus
ENSTRUG00000018490sbno19975.632ENSPTIG00000017803SBNO19975.501Panthera_tigris_altaica
ENSTRUG00000018490sbno19584.448ENSPTRG00000005597SBNO19984.448Pan_troglodytes
ENSTRUG00000018490sbno19584.672ENSPANG00000011640SBNO19984.672Papio_anubis
ENSTRUG00000018490sbno19980.439ENSPKIG00000001441sbno19980.170Paramormyrops_kingsleyae
ENSTRUG00000018490sbno19877.446ENSPSIG00000009572-9976.985Pelodiscus_sinensis
ENSTRUG00000018490sbno19272.430ENSPSIG00000009256-9972.748Pelodiscus_sinensis
ENSTRUG00000018490sbno19583.906ENSPEMG00000016087Sbno19983.906Peromyscus_maniculatus_bairdii
ENSTRUG00000018490sbno110076.044ENSPCIG00000010985SBNO19976.596Phascolarctos_cinereus
ENSTRUG00000018490sbno19986.700ENSPFOG00000005069sbno19986.629Poecilia_formosa
ENSTRUG00000018490sbno19986.700ENSPLAG00000015015sbno19986.629Poecilia_latipinna
ENSTRUG00000018490sbno19986.771ENSPMEG00000021212sbno19986.700Poecilia_mexicana
ENSTRUG00000018490sbno19986.415ENSPREG00000017746sbno19788.409Poecilia_reticulata
ENSTRUG00000018490sbno19976.003ENSPPYG00000005084SBNO19975.865Pongo_abelii
ENSTRUG00000018490sbno18476.606ENSPCAG00000008634SBNO18476.606Procavia_capensis
ENSTRUG00000018490sbno19683.005ENSPCOG00000024277SBNO19983.514Propithecus_coquereli
ENSTRUG00000018490sbno18784.600ENSPVAG00000015304SBNO18784.600Pteropus_vampyrus
ENSTRUG00000018490sbno19987.536ENSPNYG00000004291sbno19987.251Pundamilia_nyererei
ENSTRUG00000018490sbno19981.095ENSPNAG00000015622sbno19980.171Pygocentrus_nattereri
ENSTRUG00000018490sbno19584.087ENSRNOG00000001064Sbno19984.087Rattus_norvegicus
ENSTRUG00000018490sbno19584.672ENSRROG00000034230SBNO19984.672Rhinopithecus_roxellana
ENSTRUG00000018490sbno19774.191ENSSBOG00000015422SBNO19972.655Saimiri_boliviensis_boliviensis
ENSTRUG00000018490sbno19982.066ENSSFOG00015019025sbno19981.905Scleropages_formosus
ENSTRUG00000018490sbno19987.482ENSSMAG00000013640sbno19987.482Scophthalmus_maximus
ENSTRUG00000018490sbno19988.707ENSSDUG00000023480sbno19988.778Seriola_dumerili
ENSTRUG00000018490sbno19988.565ENSSLDG00000007928sbno19988.636Seriola_lalandi_dorsalis
ENSTRUG00000018490sbno18982.114ENSSARG00000002594SBNO18982.114Sorex_araneus
ENSTRUG00000018490sbno19876.946ENSSPUG00000012640SBNO19976.787Sphenodon_punctatus
ENSTRUG00000018490sbno19988.582ENSSPAG00000016244sbno19987.943Stegastes_partitus
ENSTRUG00000018490sbno19977.013ENSSSCG00000009776SBNO19977.199Sus_scrofa
ENSTRUG00000018490sbno19875.879ENSTGUG00000005380SBNO19976.292Taeniopygia_guttata
ENSTRUG00000018490sbno15790.773ENSTNIG00000013506sbno19990.841Tetraodon_nigroviridis
ENSTRUG00000018490sbno19975.683ENSUAMG00000019671SBNO19975.510Ursus_americanus
ENSTRUG00000018490sbno19975.683ENSUMAG00000004002SBNO19975.510Ursus_maritimus
ENSTRUG00000018490sbno19573.810ENSVPAG00000007024SBNO19573.810Vicugna_pacos
ENSTRUG00000018490sbno19975.613ENSVVUG00000027807SBNO19975.440Vulpes_vulpes
ENSTRUG00000018490sbno19973.628ENSXETG00000031930SBNO19972.896Xenopus_tropicalis
ENSTRUG00000018490sbno18983.293ENSXCOG00000011607sbno19981.008Xiphophorus_couchianus
ENSTRUG00000018490sbno19986.700ENSXMAG00000002140sbno19986.558Xiphophorus_maculatus

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