EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000018525 (Gene tree)
Gene ID: 101064469
Gene Symbol: ddx55
Alias: chunp6861|fc32a12|kiaa1595|wu:fc32a12
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5995 bases
Position: chr6:6037293-6043287
Accession: 101064469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000047425	ResIII	PF04851.15	3.7e-07	1	1
ENSTRUP00000047426	ResIII	PF04851.15	4.1e-07	1	1
ENSTRUP00000047426	DEAD	PF00270.29	2.5e-43	1	1
ENSTRUP00000047425	DEAD	PF00270.29	2.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000047587	-	4547	XM_003965410	ENSTRUP00000047426	597 (aa)	XP_003965459	H2VDY1
ENSTRUT00000047586	-	1692	-	ENSTRUP00000047425	563 (aa)	-	H2VDY0

Gene Model

Click here to download ENSTRUG00000018525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000018525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000018525	ddx55	60	31.111	ENSTRUG00000002188	EIF4A1	74	31.111
ENSTRUG00000018525	ddx55	60	33.161	ENSTRUG00000014001	-	57	33.161
ENSTRUG00000018525	ddx55	64	32.152	ENSTRUG00000000455	ddx23	51	32.152
ENSTRUG00000018525	ddx55	64	30.469	ENSTRUG00000012432	-	73	30.469
ENSTRUG00000018525	ddx55	64	31.888	ENSTRUG00000021524	ddx49	77	31.538
ENSTRUG00000018525	ddx55	59	32.320	ENSTRUG00000021931	si:dkey-156n14.5	54	32.320
ENSTRUG00000018525	ddx55	59	32.222	ENSTRUG00000009308	ddx5	56	32.410
ENSTRUG00000018525	ddx55	61	30.997	ENSTRUG00000010162	ddx59	57	30.997
ENSTRUG00000018525	ddx55	62	36.290	ENSTRUG00000021826	ddx47	74	36.290
ENSTRUG00000018525	ddx55	65	33.584	ENSTRUG00000004445	DDX41	63	33.584
ENSTRUG00000018525	ddx55	76	37.281	ENSTRUG00000005649	ddx18	68	37.691
ENSTRUG00000018525	ddx55	59	32.507	ENSTRUG00000002356	DDX5	54	32.787
ENSTRUG00000018525	ddx55	60	34.278	ENSTRUG00000003862	-	52	34.527
ENSTRUG00000018525	ddx55	59	33.149	ENSTRUG00000009294	-	72	31.366
ENSTRUG00000018525	ddx55	59	31.909	ENSTRUG00000011848	ddx6	68	31.909
ENSTRUG00000018525	ddx55	74	37.557	ENSTRUG00000010881	ddx10	51	37.671
ENSTRUG00000018525	ddx55	60	35.437	ENSTRUG00000013699	ddx31	54	35.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000018525	ddx55	97	71.918	ENSG00000111364	DDX55	96	73.224	Homo_sapiens
ENSTRUG00000018525	ddx55	98	86.201	ENSAPOG00000013126	ddx55	99	86.201	Acanthochromis_polyacanthus
ENSTRUG00000018525	ddx55	97	71.012	ENSAMEG00000015274	DDX55	97	71.012	Ailuropoda_melanoleuca
ENSTRUG00000018525	ddx55	99	84.068	ENSACIG00000007580	ddx55	99	84.068	Amphilophus_citrinellus
ENSTRUG00000018525	ddx55	98	86.371	ENSAOCG00000012037	ddx55	93	86.371	Amphiprion_ocellaris
ENSTRUG00000018525	ddx55	98	86.201	ENSAPEG00000011003	ddx55	93	86.201	Amphiprion_percula
ENSTRUG00000018525	ddx55	100	85.117	ENSATEG00000004029	ddx55	100	85.117	Anabas_testudineus
ENSTRUG00000018525	ddx55	91	70.438	ENSAPLG00000015032	DDX55	97	70.438	Anas_platyrhynchos
ENSTRUG00000018525	ddx55	97	71.207	ENSACAG00000015296	DDX55	97	71.207	Anolis_carolinensis
ENSTRUG00000018525	ddx55	89	71.658	ENSANAG00000034064	DDX55	98	71.658	Aotus_nancymaae
ENSTRUG00000018525	ddx55	99	84.264	ENSACLG00000024691	ddx55	100	84.264	Astatotilapia_calliptera
ENSTRUG00000018525	ddx55	99	72.222	ENSAMXG00000019947	ddx55	99	72.222	Astyanax_mexicanus
ENSTRUG00000018525	ddx55	97	71.404	ENSBTAG00000007266	DDX55	97	67.295	Bos_taurus
ENSTRUG00000018525	ddx55	94	36.851	WBGene00013983	ZK512.2	98	36.770	Caenorhabditis_elegans
ENSTRUG00000018525	ddx55	98	71.017	ENSCJAG00000020471	-	98	71.017	Callithrix_jacchus
ENSTRUG00000018525	ddx55	98	70.669	ENSCAFG00000007452	DDX55	97	70.669	Canis_familiaris
ENSTRUG00000018525	ddx55	91	71.534	ENSCAFG00020015254	DDX55	97	71.534	Canis_lupus_dingo
ENSTRUG00000018525	ddx55	97	71.233	ENSCHIG00000020402	DDX55	97	71.233	Capra_hircus
ENSTRUG00000018525	ddx55	99	70.500	ENSTSYG00000007427	DDX55	99	70.500	Carlito_syrichta
ENSTRUG00000018525	ddx55	94	72.598	ENSCAPG00000005124	DDX55	96	72.598	Cavia_aperea
ENSTRUG00000018525	ddx55	99	71.959	ENSCPOG00000010015	DDX55	99	71.959	Cavia_porcellus
ENSTRUG00000018525	ddx55	98	71.356	ENSCCAG00000021652	DDX55	98	71.525	Cebus_capucinus
ENSTRUG00000018525	ddx55	97	67.731	ENSCATG00000034315	DDX55	97	67.731	Cercocebus_atys
ENSTRUG00000018525	ddx55	97	73.010	ENSCLAG00000011203	DDX55	96	73.010	Chinchilla_lanigera
ENSTRUG00000018525	ddx55	97	71.747	ENSCSAG00000002057	DDX55	97	71.747	Chlorocebus_sabaeus
ENSTRUG00000018525	ddx55	91	73.985	ENSCPBG00000025960	DDX55	99	73.985	Chrysemys_picta_bellii
ENSTRUG00000018525	ddx55	97	54.653	ENSCING00000009622	-	98	54.653	Ciona_intestinalis
ENSTRUG00000018525	ddx55	98	53.445	ENSCSAVG00000003375	-	99	53.782	Ciona_savignyi
ENSTRUG00000018525	ddx55	97	71.747	ENSCANG00000000156	DDX55	97	71.747	Colobus_angolensis_palliatus
ENSTRUG00000018525	ddx55	98	71.282	ENSCGRG00001001652	Ddx55	97	71.282	Cricetulus_griseus_chok1gshd
ENSTRUG00000018525	ddx55	98	71.282	ENSCGRG00000014742	Ddx55	97	71.282	Cricetulus_griseus_crigri
ENSTRUG00000018525	ddx55	99	82.660	ENSCSEG00000012161	ddx55	99	82.660	Cynoglossus_semilaevis
ENSTRUG00000018525	ddx55	99	83.108	ENSCVAG00000006635	ddx55	100	83.108	Cyprinodon_variegatus
ENSTRUG00000018525	ddx55	99	80.034	ENSDARG00000009864	ddx55	100	80.034	Danio_rerio
ENSTRUG00000018525	ddx55	98	71.891	ENSDNOG00000005167	DDX55	97	71.891	Dasypus_novemcinctus
ENSTRUG00000018525	ddx55	96	48.710	FBgn0037561	CG9630	99	48.382	Drosophila_melanogaster
ENSTRUG00000018525	ddx55	91	60.949	ENSETEG00000001826	DDX55	97	60.949	Echinops_telfairi
ENSTRUG00000018525	ddx55	95	62.521	ENSEBUG00000007071	ddx55	98	62.795	Eptatretus_burgeri
ENSTRUG00000018525	ddx55	98	71.356	ENSEASG00005012650	DDX55	100	72.782	Equus_asinus_asinus
ENSTRUG00000018525	ddx55	87	72.467	ENSECAG00000011237	DDX55	87	71.823	Equus_caballus
ENSTRUG00000018525	ddx55	97	62.759	ENSEEUG00000006313	DDX55	97	62.759	Erinaceus_europaeus
ENSTRUG00000018525	ddx55	99	80.201	ENSELUG00000002616	ddx55	99	80.201	Esox_lucius
ENSTRUG00000018525	ddx55	97	71.698	ENSFCAG00000003770	DDX55	97	71.698	Felis_catus
ENSTRUG00000018525	ddx55	98	73.333	ENSFALG00000009300	DDX55	98	73.333	Ficedula_albicollis
ENSTRUG00000018525	ddx55	98	71.186	ENSFDAG00000004680	DDX55	98	71.186	Fukomys_damarensis
ENSTRUG00000018525	ddx55	97	83.218	ENSFHEG00000007912	ddx55	98	83.218	Fundulus_heteroclitus
ENSTRUG00000018525	ddx55	97	78.066	ENSGMOG00000017762	ddx55	96	78.066	Gadus_morhua
ENSTRUG00000018525	ddx55	97	72.680	ENSGALG00000003298	DDX55	98	72.680	Gallus_gallus
ENSTRUG00000018525	ddx55	99	82.572	ENSGAFG00000004388	ddx55	100	82.572	Gambusia_affinis
ENSTRUG00000018525	ddx55	98	82.735	ENSGACG00000015591	ddx55	97	81.879	Gasterosteus_aculeatus
ENSTRUG00000018525	ddx55	91	74.723	ENSGAGG00000014403	DDX55	99	74.723	Gopherus_agassizii
ENSTRUG00000018525	ddx55	97	71.747	ENSGGOG00000026102	DDX55	97	71.747	Gorilla_gorilla
ENSTRUG00000018525	ddx55	99	84.264	ENSHBUG00000011523	ddx55	100	84.264	Haplochromis_burtoni
ENSTRUG00000018525	ddx55	99	70.785	ENSHGLG00000019202	DDX55	99	70.785	Heterocephalus_glaber_female
ENSTRUG00000018525	ddx55	99	70.785	ENSHGLG00100019440	DDX55	99	70.785	Heterocephalus_glaber_male
ENSTRUG00000018525	ddx55	97	71.724	ENSHCOG00000004710	ddx55	99	72.152	Hippocampus_comes
ENSTRUG00000018525	ddx55	99	79.362	ENSIPUG00000014551	ddx55	98	79.362	Ictalurus_punctatus
ENSTRUG00000018525	ddx55	99	70.067	ENSSTOG00000006121	DDX55	99	70.067	Ictidomys_tridecemlineatus
ENSTRUG00000018525	ddx55	97	71.747	ENSJJAG00000013401	Ddx55	99	70.618	Jaculus_jaculus
ENSTRUG00000018525	ddx55	99	81.218	ENSKMAG00000022006	ddx55	100	81.218	Kryptolebias_marmoratus
ENSTRUG00000018525	ddx55	99	84.333	ENSLBEG00000021815	ddx55	99	84.333	Labrus_bergylta
ENSTRUG00000018525	ddx55	99	74.831	ENSLACG00000017050	DDX55	99	74.831	Latimeria_chalumnae
ENSTRUG00000018525	ddx55	99	78.188	ENSLOCG00000005828	ddx55	99	78.188	Lepisosteus_oculatus
ENSTRUG00000018525	ddx55	97	72.432	ENSLAFG00000007293	DDX55	97	72.432	Loxodonta_africana
ENSTRUG00000018525	ddx55	97	71.747	ENSMFAG00000038165	DDX55	97	71.747	Macaca_fascicularis
ENSTRUG00000018525	ddx55	97	71.747	ENSMMUG00000013178	DDX55	97	71.747	Macaca_mulatta
ENSTRUG00000018525	ddx55	97	71.747	ENSMNEG00000028630	DDX55	97	71.747	Macaca_nemestrina
ENSTRUG00000018525	ddx55	97	71.918	ENSMLEG00000039187	DDX55	97	71.918	Mandrillus_leucophaeus
ENSTRUG00000018525	ddx55	100	85.025	ENSMAMG00000011297	ddx55	100	85.025	Mastacembelus_armatus
ENSTRUG00000018525	ddx55	99	84.264	ENSMZEG00005008047	ddx55	100	84.264	Maylandia_zebra
ENSTRUG00000018525	ddx55	98	68.644	ENSMGAG00000003185	DDX55	98	68.900	Meleagris_gallopavo
ENSTRUG00000018525	ddx55	98	71.624	ENSMAUG00000020054	Ddx55	97	71.624	Mesocricetus_auratus
ENSTRUG00000018525	ddx55	98	64.505	ENSMICG00000006477	DDX55	97	64.505	Microcebus_murinus
ENSTRUG00000018525	ddx55	97	71.575	ENSMOCG00000021289	Ddx55	97	71.575	Microtus_ochrogaster
ENSTRUG00000018525	ddx55	99	88.533	ENSMMOG00000009411	ddx55	99	88.533	Mola_mola
ENSTRUG00000018525	ddx55	93	73.153	ENSMODG00000012519	DDX55	96	73.153	Monodelphis_domestica
ENSTRUG00000018525	ddx55	99	80.705	ENSMALG00000018543	ddx55	99	80.705	Monopterus_albus
ENSTRUG00000018525	ddx55	75	75.506	MGP_CAROLIEiJ_G0027755	-	99	75.506	Mus_caroli
ENSTRUG00000018525	ddx55	97	72.089	ENSMUSG00000029389	Ddx55	97	72.089	Mus_musculus
ENSTRUG00000018525	ddx55	99	67.726	MGP_PahariEiJ_G0024335	Ddx55	97	69.007	Mus_pahari
ENSTRUG00000018525	ddx55	97	71.747	MGP_SPRETEiJ_G0028753	Ddx55	97	71.747	Mus_spretus
ENSTRUG00000018525	ddx55	97	67.808	ENSMPUG00000001505	DDX55	97	67.808	Mustela_putorius_furo
ENSTRUG00000018525	ddx55	87	61.450	ENSMLUG00000025148	-	99	60.846	Myotis_lucifugus
ENSTRUG00000018525	ddx55	99	63.255	ENSMLUG00000001265	-	99	63.255	Myotis_lucifugus
ENSTRUG00000018525	ddx55	97	71.062	ENSNGAG00000020564	Ddx55	97	71.062	Nannospalax_galili
ENSTRUG00000018525	ddx55	99	84.602	ENSNBRG00000018748	ddx55	100	84.602	Neolamprologus_brichardi
ENSTRUG00000018525	ddx55	98	71.356	ENSNLEG00000001658	DDX55	98	71.356	Nomascus_leucogenys
ENSTRUG00000018525	ddx55	98	69.165	ENSMEUG00000013689	DDX55	98	69.165	Notamacropus_eugenii
ENSTRUG00000018525	ddx55	98	71.233	ENSOPRG00000000850	DDX55	97	71.233	Ochotona_princeps
ENSTRUG00000018525	ddx55	94	58.497	ENSODEG00000016592	-	97	58.011	Octodon_degus
ENSTRUG00000018525	ddx55	99	70.017	ENSODEG00000009632	-	99	70.017	Octodon_degus
ENSTRUG00000018525	ddx55	100	83.946	ENSONIG00000015311	ddx55	99	83.946	Oreochromis_niloticus
ENSTRUG00000018525	ddx55	92	73.188	ENSOANG00000015332	DDX55	98	73.188	Ornithorhynchus_anatinus
ENSTRUG00000018525	ddx55	98	71.477	ENSOCUG00000003456	DDX55	97	72.041	Oryctolagus_cuniculus
ENSTRUG00000018525	ddx55	99	79.730	ENSORLG00000029482	ddx55	99	79.730	Oryzias_latipes
ENSTRUG00000018525	ddx55	99	79.223	ENSORLG00015004885	ddx55	98	81.284	Oryzias_latipes_hsok
ENSTRUG00000018525	ddx55	99	80.203	ENSOMEG00000023619	ddx55	99	80.203	Oryzias_melastigma
ENSTRUG00000018525	ddx55	98	70.051	ENSOGAG00000009195	DDX55	98	70.051	Otolemur_garnettii
ENSTRUG00000018525	ddx55	97	71.918	ENSOARG00000003364	DDX55	97	71.918	Ovis_aries
ENSTRUG00000018525	ddx55	97	72.089	ENSPPAG00000005988	DDX55	97	72.089	Pan_paniscus
ENSTRUG00000018525	ddx55	97	72.041	ENSPPRG00000012157	DDX55	97	72.041	Panthera_pardus
ENSTRUG00000018525	ddx55	91	73.309	ENSPTIG00000011490	DDX55	91	73.309	Panthera_tigris_altaica
ENSTRUG00000018525	ddx55	97	71.918	ENSPTRG00000005601	DDX55	97	71.918	Pan_troglodytes
ENSTRUG00000018525	ddx55	97	71.918	ENSPANG00000007905	DDX55	97	71.918	Papio_anubis
ENSTRUG00000018525	ddx55	97	78.793	ENSPKIG00000023661	ddx55	99	78.793	Paramormyrops_kingsleyae
ENSTRUG00000018525	ddx55	92	75.318	ENSPSIG00000012901	DDX55	100	74.141	Pelodiscus_sinensis
ENSTRUG00000018525	ddx55	90	81.413	ENSPMGG00000017224	ddx55	99	81.413	Periophthalmus_magnuspinnatus
ENSTRUG00000018525	ddx55	99	70.500	ENSPEMG00000018052	Ddx55	99	70.500	Peromyscus_maniculatus_bairdii
ENSTRUG00000018525	ddx55	86	65.637	ENSPMAG00000007486	ddx55	99	65.517	Petromyzon_marinus
ENSTRUG00000018525	ddx55	87	73.563	ENSPCIG00000010973	DDX55	98	72.878	Phascolarctos_cinereus
ENSTRUG00000018525	ddx55	99	82.968	ENSPFOG00000006970	ddx55	92	82.968	Poecilia_formosa
ENSTRUG00000018525	ddx55	99	82.910	ENSPLAG00000014735	ddx55	100	82.910	Poecilia_latipinna
ENSTRUG00000018525	ddx55	99	83.249	ENSPMEG00000020635	ddx55	100	83.249	Poecilia_mexicana
ENSTRUG00000018525	ddx55	99	82.741	ENSPREG00000016644	ddx55	100	82.741	Poecilia_reticulata
ENSTRUG00000018525	ddx55	99	69.167	ENSPPYG00000005091	DDX55	99	69.000	Pongo_abelii
ENSTRUG00000018525	ddx55	97	72.260	ENSPCAG00000014127	DDX55	97	72.260	Procavia_capensis
ENSTRUG00000018525	ddx55	98	71.017	ENSPCOG00000011189	DDX55	98	71.017	Propithecus_coquereli
ENSTRUG00000018525	ddx55	99	70.234	ENSPVAG00000015321	DDX55	99	70.234	Pteropus_vampyrus
ENSTRUG00000018525	ddx55	99	84.095	ENSPNYG00000003669	ddx55	100	84.095	Pundamilia_nyererei
ENSTRUG00000018525	ddx55	99	80.303	ENSPNAG00000012855	ddx55	99	80.303	Pygocentrus_nattereri
ENSTRUG00000018525	ddx55	99	70.667	ENSRNOG00000001043	Ddx55	99	70.667	Rattus_norvegicus
ENSTRUG00000018525	ddx55	97	71.404	ENSRBIG00000044699	DDX55	97	71.404	Rhinopithecus_bieti
ENSTRUG00000018525	ddx55	97	71.747	ENSRROG00000024824	DDX55	97	71.747	Rhinopithecus_roxellana
ENSTRUG00000018525	ddx55	90	37.478	YFL002C	-	90	37.589	Saccharomyces_cerevisiae
ENSTRUG00000018525	ddx55	98	70.628	ENSSBOG00000024833	DDX55	98	71.356	Saimiri_boliviensis_boliviensis
ENSTRUG00000018525	ddx55	92	73.684	ENSSHAG00000015820	DDX55	97	73.684	Sarcophilus_harrisii
ENSTRUG00000018525	ddx55	99	78.655	ENSSFOG00015017496	ddx55	98	78.655	Scleropages_formosus
ENSTRUG00000018525	ddx55	100	84.551	ENSSMAG00000010441	ddx55	100	84.551	Scophthalmus_maximus
ENSTRUG00000018525	ddx55	98	85.349	ENSSDUG00000023568	ddx55	98	85.349	Seriola_dumerili
ENSTRUG00000018525	ddx55	99	79.832	ENSSLDG00000011299	ddx55	99	79.832	Seriola_lalandi_dorsalis
ENSTRUG00000018525	ddx55	93	70.251	ENSSARG00000003842	DDX55	99	70.251	Sorex_araneus
ENSTRUG00000018525	ddx55	97	72.414	ENSSPUG00000012798	DDX55	97	72.414	Sphenodon_punctatus
ENSTRUG00000018525	ddx55	98	85.690	ENSSPAG00000011806	ddx55	98	85.690	Stegastes_partitus
ENSTRUG00000018525	ddx55	87	73.423	ENSSSCG00000009771	DDX55	98	72.744	Sus_scrofa
ENSTRUG00000018525	ddx55	96	73.693	ENSTGUG00000005302	-	99	72.991	Taeniopygia_guttata
ENSTRUG00000018525	ddx55	96	91.667	ENSTNIG00000013515	DDX55	96	91.667	Tetraodon_nigroviridis
ENSTRUG00000018525	ddx55	74	69.369	ENSTBEG00000010822	DDX55	100	69.369	Tupaia_belangeri
ENSTRUG00000018525	ddx55	98	71.186	ENSTTRG00000007251	DDX55	98	71.186	Tursiops_truncatus
ENSTRUG00000018525	ddx55	97	70.669	ENSUAMG00000012589	DDX55	97	70.669	Ursus_americanus
ENSTRUG00000018525	ddx55	90	71.852	ENSUMAG00000003869	DDX55	97	71.852	Ursus_maritimus
ENSTRUG00000018525	ddx55	93	65.889	ENSVPAG00000007028	DDX55	99	65.889	Vicugna_pacos
ENSTRUG00000018525	ddx55	98	71.233	ENSVVUG00000027506	DDX55	99	72.892	Vulpes_vulpes
ENSTRUG00000018525	ddx55	99	71.812	ENSXETG00000005825	ddx55	99	71.812	Xenopus_tropicalis
ENSTRUG00000018525	ddx55	99	81.895	ENSXCOG00000010120	ddx55	100	81.895	Xiphophorus_couchianus
ENSTRUG00000018525	ddx55	99	82.403	ENSXMAG00000011731	ddx55	100	82.403	Xiphophorus_maculatus