EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000018623 (Gene tree)
Gene ID: 101073516
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 7676 bases
Position: chr6:6720377-6728052
Accession: 101073516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055372	ResIII	PF04851.15	3.1e-08	1	1
ENSTRUP00000047707	ResIII	PF04851.15	3.5e-08	1	1
ENSTRUP00000047707	DEAD	PF00270.29	8e-40	1	1
ENSTRUP00000055372	DEAD	PF00270.29	9.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057119	-	5671	XM_003965367	ENSTRUP00000055372	563 (aa)	XP_003965416	UPI000298C7A5
ENSTRUT00000047869	-	1593	-	ENSTRUP00000047707	530 (aa)	-	H2VER2

Gene Model

Click here to download ENSTRUG00000018623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000018623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000018623	ddx56	70	30.504	ENSTRUG00000021931	si:dkey-156n14.5	55	30.295
ENSTRUG00000018623	ddx56	79	31.059	ENSTRUG00000017071	ddx52	57	31.059
ENSTRUG00000018623	ddx56	68	30.055	ENSTRUG00000012795	ddx43	50	30.055
ENSTRUG00000018623	ddx56	71	30.000	ENSTRUG00000005649	ddx18	55	30.000
ENSTRUG00000018623	ddx56	68	31.414	ENSTRUG00000014001	-	56	31.414
ENSTRUG00000018623	ddx56	72	32.558	ENSTRUG00000002089	ddx27	51	32.558
ENSTRUG00000018623	ddx56	78	31.643	ENSTRUG00000021826	ddx47	81	31.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000018623	ddx56	99	64.404	ENSG00000136271	DDX56	98	68.681	Homo_sapiens
ENSTRUG00000018623	ddx56	100	86.170	ENSAPOG00000017113	ddx56	100	86.170	Acanthochromis_polyacanthus
ENSTRUG00000018623	ddx56	98	64.299	ENSAMEG00000017711	DDX56	98	64.299	Ailuropoda_melanoleuca
ENSTRUG00000018623	ddx56	95	70.240	ENSACIG00000013747	ddx56	100	85.870	Amphilophus_citrinellus
ENSTRUG00000018623	ddx56	87	89.592	ENSAOCG00000015447	-	87	88.776	Amphiprion_ocellaris
ENSTRUG00000018623	ddx56	92	86.811	ENSAOCG00000018059	ddx56	94	88.469	Amphiprion_ocellaris
ENSTRUG00000018623	ddx56	100	85.284	ENSAPEG00000007267	ddx56	100	84.929	Amphiprion_percula
ENSTRUG00000018623	ddx56	99	83.066	ENSATEG00000005279	ddx56	99	83.066	Anabas_testudineus
ENSTRUG00000018623	ddx56	100	81.206	ENSACLG00000020113	ddx56	100	81.206	Astatotilapia_calliptera
ENSTRUG00000018623	ddx56	99	75.045	ENSAMXG00000019357	ddx56	99	75.887	Astyanax_mexicanus
ENSTRUG00000018623	ddx56	99	64.641	ENSBTAG00000010602	DDX56	99	64.641	Bos_taurus
ENSTRUG00000018623	ddx56	97	40.107	WBGene00016073	C24H12.4	86	39.464	Caenorhabditis_elegans
ENSTRUG00000018623	ddx56	99	64.404	ENSCJAG00000012233	DDX56	99	64.404	Callithrix_jacchus
ENSTRUG00000018623	ddx56	80	62.642	ENSCAFG00000029295	DDX56	99	62.870	Canis_familiaris
ENSTRUG00000018623	ddx56	98	63.910	ENSCAFG00020019695	DDX56	98	64.098	Canis_lupus_dingo
ENSTRUG00000018623	ddx56	99	64.641	ENSCHIG00000014261	DDX56	99	64.641	Capra_hircus
ENSTRUG00000018623	ddx56	90	68.699	ENSTSYG00000008048	DDX56	99	64.522	Carlito_syrichta
ENSTRUG00000018623	ddx56	87	63.673	ENSCAPG00000006286	DDX56	99	64.331	Cavia_aperea
ENSTRUG00000018623	ddx56	99	65.809	ENSCPOG00000003359	DDX56	99	65.809	Cavia_porcellus
ENSTRUG00000018623	ddx56	99	64.220	ENSCCAG00000025303	DDX56	99	64.037	Cebus_capucinus
ENSTRUG00000018623	ddx56	99	64.154	ENSCATG00000039389	DDX56	99	64.154	Cercocebus_atys
ENSTRUG00000018623	ddx56	98	65.299	ENSCLAG00000007666	DDX56	98	65.299	Chinchilla_lanigera
ENSTRUG00000018623	ddx56	99	64.220	ENSCSAG00000015636	DDX56	99	64.220	Chlorocebus_sabaeus
ENSTRUG00000018623	ddx56	98	67.631	ENSCPBG00000024556	DDX56	97	67.450	Chrysemys_picta_bellii
ENSTRUG00000018623	ddx56	90	59.649	ENSCING00000005185	-	98	59.454	Ciona_intestinalis
ENSTRUG00000018623	ddx56	90	58.918	ENSCSAVG00000011266	-	99	59.281	Ciona_savignyi
ENSTRUG00000018623	ddx56	98	64.684	ENSCANG00000028187	DDX56	98	64.684	Colobus_angolensis_palliatus
ENSTRUG00000018623	ddx56	99	63.720	ENSCGRG00001019019	Ddx56	99	63.720	Cricetulus_griseus_chok1gshd
ENSTRUG00000018623	ddx56	99	63.720	ENSCGRG00000011870	Ddx56	99	63.720	Cricetulus_griseus_crigri
ENSTRUG00000018623	ddx56	100	80.177	ENSCSEG00000008368	ddx56	100	79.646	Cynoglossus_semilaevis
ENSTRUG00000018623	ddx56	100	81.738	ENSCVAG00000006499	ddx56	100	82.301	Cyprinodon_variegatus
ENSTRUG00000018623	ddx56	99	77.975	ENSDARG00000020913	ddx56	99	77.562	Danio_rerio
ENSTRUG00000018623	ddx56	87	61.837	ENSDNOG00000036526	DDX56	99	62.340	Dasypus_novemcinctus
ENSTRUG00000018623	ddx56	99	49.376	FBgn0001565	Hlc	98	49.376	Drosophila_melanogaster
ENSTRUG00000018623	ddx56	87	46.186	ENSETEG00000019559	-	100	46.186	Echinops_telfairi
ENSTRUG00000018623	ddx56	64	73.611	ENSETEG00000002969	-	64	73.611	Echinops_telfairi
ENSTRUG00000018623	ddx56	97	64.610	ENSEBUG00000009986	ddx56	99	65.517	Eptatretus_burgeri
ENSTRUG00000018623	ddx56	98	64.179	ENSEASG00005017795	DDX56	98	64.179	Equus_asinus_asinus
ENSTRUG00000018623	ddx56	98	63.993	ENSECAG00000019897	DDX56	98	63.993	Equus_caballus
ENSTRUG00000018623	ddx56	85	63.354	ENSEEUG00000004849	DDX56	98	63.354	Erinaceus_europaeus
ENSTRUG00000018623	ddx56	100	80.319	ENSELUG00000004150	ddx56	100	80.142	Esox_lucius
ENSTRUG00000018623	ddx56	98	64.299	ENSFCAG00000010261	DDX56	98	64.299	Felis_catus
ENSTRUG00000018623	ddx56	99	63.904	ENSFDAG00000007128	DDX56	99	63.904	Fukomys_damarensis
ENSTRUG00000018623	ddx56	99	81.250	ENSFHEG00000018008	ddx56	96	86.680	Fundulus_heteroclitus
ENSTRUG00000018623	ddx56	100	75.000	ENSGAFG00000006906	ddx56	99	76.147	Gambusia_affinis
ENSTRUG00000018623	ddx56	94	68.856	ENSGAGG00000006789	DDX56	93	68.668	Gopherus_agassizii
ENSTRUG00000018623	ddx56	99	64.404	ENSGGOG00000012031	DDX56	99	64.404	Gorilla_gorilla
ENSTRUG00000018623	ddx56	95	76.164	ENSHBUG00000015246	ddx56	96	76.164	Haplochromis_burtoni
ENSTRUG00000018623	ddx56	99	64.273	ENSHGLG00000017271	DDX56	99	64.273	Heterocephalus_glaber_female
ENSTRUG00000018623	ddx56	99	64.273	ENSHGLG00100015731	DDX56	99	64.273	Heterocephalus_glaber_male
ENSTRUG00000018623	ddx56	99	80.714	ENSHCOG00000001685	ddx56	99	80.000	Hippocampus_comes
ENSTRUG00000018623	ddx56	98	75.451	ENSIPUG00000006602	ddx56	97	75.812	Ictalurus_punctatus
ENSTRUG00000018623	ddx56	99	64.457	ENSSTOG00000000464	DDX56	99	64.457	Ictidomys_tridecemlineatus
ENSTRUG00000018623	ddx56	98	65.177	ENSJJAG00000014269	Ddx56	99	65.177	Jaculus_jaculus
ENSTRUG00000018623	ddx56	100	81.915	ENSKMAG00000016611	ddx56	100	81.915	Kryptolebias_marmoratus
ENSTRUG00000018623	ddx56	99	84.547	ENSLBEG00000026281	ddx56	100	84.547	Labrus_bergylta
ENSTRUG00000018623	ddx56	99	69.892	ENSLACG00000015551	DDX56	97	70.483	Latimeria_chalumnae
ENSTRUG00000018623	ddx56	100	75.442	ENSLOCG00000015185	ddx56	100	74.735	Lepisosteus_oculatus
ENSTRUG00000018623	ddx56	99	64.043	ENSLAFG00000018206	DDX56	99	65.000	Loxodonta_africana
ENSTRUG00000018623	ddx56	99	64.154	ENSMFAG00000041001	DDX56	99	64.154	Macaca_fascicularis
ENSTRUG00000018623	ddx56	99	64.154	ENSMMUG00000002645	DDX56	99	64.154	Macaca_mulatta
ENSTRUG00000018623	ddx56	99	64.154	ENSMNEG00000028492	DDX56	99	64.154	Macaca_nemestrina
ENSTRUG00000018623	ddx56	99	64.338	ENSMLEG00000043591	DDX56	99	64.338	Mandrillus_leucophaeus
ENSTRUG00000018623	ddx56	100	84.602	ENSMAMG00000007776	ddx56	100	84.779	Mastacembelus_armatus
ENSTRUG00000018623	ddx56	100	81.206	ENSMZEG00005009813	ddx56	100	81.206	Maylandia_zebra
ENSTRUG00000018623	ddx56	99	64.338	ENSMICG00000005550	DDX56	99	64.338	Microcebus_murinus
ENSTRUG00000018623	ddx56	99	63.168	ENSMOCG00000016782	Ddx56	99	63.168	Microtus_ochrogaster
ENSTRUG00000018623	ddx56	100	80.995	ENSMMOG00000009654	ddx56	100	82.149	Mola_mola
ENSTRUG00000018623	ddx56	98	59.704	ENSMODG00000016137	DDX56	98	59.704	Monodelphis_domestica
ENSTRUG00000018623	ddx56	68	82.192	ENSMALG00000016910	ddx56	99	82.192	Monopterus_albus
ENSTRUG00000018623	ddx56	99	62.799	MGP_CAROLIEiJ_G0016069	Ddx56	98	66.129	Mus_caroli
ENSTRUG00000018623	ddx56	99	62.983	ENSMUSG00000004393	Ddx56	98	66.532	Mus_musculus
ENSTRUG00000018623	ddx56	99	62.983	MGP_PahariEiJ_G0016822	Ddx56	98	66.129	Mus_pahari
ENSTRUG00000018623	ddx56	99	62.983	MGP_SPRETEiJ_G0016911	Ddx56	98	66.532	Mus_spretus
ENSTRUG00000018623	ddx56	98	64.299	ENSMPUG00000018196	DDX56	86	64.299	Mustela_putorius_furo
ENSTRUG00000018623	ddx56	99	63.469	ENSMLUG00000003509	DDX56	99	63.469	Myotis_lucifugus
ENSTRUG00000018623	ddx56	99	65.378	ENSNGAG00000018785	Ddx56	99	65.378	Nannospalax_galili
ENSTRUG00000018623	ddx56	91	82.365	ENSNBRG00000002656	ddx56	98	75.365	Neolamprologus_brichardi
ENSTRUG00000018623	ddx56	98	64.870	ENSNLEG00000003816	DDX56	98	64.870	Nomascus_leucogenys
ENSTRUG00000018623	ddx56	91	61.055	ENSMEUG00000006788	DDX56	99	61.055	Notamacropus_eugenii
ENSTRUG00000018623	ddx56	98	62.681	ENSOPRG00000000292	-	97	63.516	Ochotona_princeps
ENSTRUG00000018623	ddx56	68	68.194	ENSODEG00000014807	DDX56	99	68.194	Octodon_degus
ENSTRUG00000018623	ddx56	99	80.926	ENSONIG00000011509	ddx56	99	80.926	Oreochromis_niloticus
ENSTRUG00000018623	ddx56	73	58.312	ENSOANG00000015987	-	94	58.312	Ornithorhynchus_anatinus
ENSTRUG00000018623	ddx56	50	61.071	ENSOANG00000010592	-	99	65.649	Ornithorhynchus_anatinus
ENSTRUG00000018623	ddx56	96	56.597	ENSOANG00000006320	-	100	56.870	Ornithorhynchus_anatinus
ENSTRUG00000018623	ddx56	99	63.653	ENSOCUG00000022918	DDX56	99	63.838	Oryctolagus_cuniculus
ENSTRUG00000018623	ddx56	100	81.028	ENSORLG00000001434	ddx56	100	81.028	Oryzias_latipes
ENSTRUG00000018623	ddx56	100	80.674	ENSORLG00020015718	ddx56	97	80.674	Oryzias_latipes_hni
ENSTRUG00000018623	ddx56	99	80.995	ENSORLG00015003004	ddx56	96	80.995	Oryzias_latipes_hsok
ENSTRUG00000018623	ddx56	100	81.383	ENSOMEG00000022072	ddx56	99	81.383	Oryzias_melastigma
ENSTRUG00000018623	ddx56	99	64.338	ENSOGAG00000009981	DDX56	99	64.522	Otolemur_garnettii
ENSTRUG00000018623	ddx56	99	64.641	ENSOARG00000015240	DDX56	99	64.641	Ovis_aries
ENSTRUG00000018623	ddx56	99	61.733	ENSPPAG00000029147	DDX56	99	61.733	Pan_paniscus
ENSTRUG00000018623	ddx56	98	54.614	ENSPPAG00000031263	-	98	54.614	Pan_paniscus
ENSTRUG00000018623	ddx56	98	63.501	ENSPPRG00000014594	DDX56	98	63.704	Panthera_pardus
ENSTRUG00000018623	ddx56	84	62.391	ENSPTIG00000019500	DDX56	90	62.391	Panthera_tigris_altaica
ENSTRUG00000018623	ddx56	99	64.404	ENSPTRG00000019147	DDX56	99	64.404	Pan_troglodytes
ENSTRUG00000018623	ddx56	94	53.333	ENSPTRG00000052765	-	100	54.706	Pan_troglodytes
ENSTRUG00000018623	ddx56	99	64.154	ENSPANG00000002446	DDX56	99	64.154	Papio_anubis
ENSTRUG00000018623	ddx56	99	75.850	ENSPKIG00000018998	ddx56	99	75.850	Paramormyrops_kingsleyae
ENSTRUG00000018623	ddx56	98	79.182	ENSPMGG00000017421	ddx56	99	81.447	Periophthalmus_magnuspinnatus
ENSTRUG00000018623	ddx56	99	64.875	ENSPCIG00000009336	DDX56	98	65.619	Phascolarctos_cinereus
ENSTRUG00000018623	ddx56	100	81.028	ENSPFOG00000018658	ddx56	100	81.738	Poecilia_formosa
ENSTRUG00000018623	ddx56	100	81.206	ENSPLAG00000019208	ddx56	100	81.915	Poecilia_latipinna
ENSTRUG00000018623	ddx56	100	81.028	ENSPMEG00000001775	ddx56	100	81.738	Poecilia_mexicana
ENSTRUG00000018623	ddx56	100	81.738	ENSPREG00000015142	ddx56	100	81.738	Poecilia_reticulata
ENSTRUG00000018623	ddx56	99	64.404	ENSPPYG00000017591	DDX56	99	64.404	Pongo_abelii
ENSTRUG00000018623	ddx56	97	63.620	ENSPCAG00000011499	DDX56	100	64.583	Procavia_capensis
ENSTRUG00000018623	ddx56	99	64.522	ENSPCOG00000024864	DDX56	99	64.522	Propithecus_coquereli
ENSTRUG00000018623	ddx56	88	68.720	ENSPVAG00000000791	DDX56	87	68.720	Pteropus_vampyrus
ENSTRUG00000018623	ddx56	100	81.028	ENSPNYG00000019212	ddx56	100	81.028	Pundamilia_nyererei
ENSTRUG00000018623	ddx56	99	77.957	ENSPNAG00000025446	ddx56	99	77.957	Pygocentrus_nattereri
ENSTRUG00000018623	ddx56	99	63.352	ENSRNOG00000004670	Ddx56	99	63.352	Rattus_norvegicus
ENSTRUG00000018623	ddx56	99	64.404	ENSRBIG00000030140	DDX56	99	64.404	Rhinopithecus_bieti
ENSTRUG00000018623	ddx56	99	64.220	ENSRROG00000044428	DDX56	99	64.220	Rhinopithecus_roxellana
ENSTRUG00000018623	ddx56	97	43.958	YLR276C	-	97	44.828	Saccharomyces_cerevisiae
ENSTRUG00000018623	ddx56	99	64.037	ENSSBOG00000034339	DDX56	99	64.037	Saimiri_boliviensis_boliviensis
ENSTRUG00000018623	ddx56	87	63.934	ENSSHAG00000016615	DDX56	99	64.119	Sarcophilus_harrisii
ENSTRUG00000018623	ddx56	100	75.000	ENSSFOG00015012795	ddx56	100	74.824	Scleropages_formosus
ENSTRUG00000018623	ddx56	100	85.009	ENSSMAG00000011280	ddx56	99	87.570	Scophthalmus_maximus
ENSTRUG00000018623	ddx56	100	85.866	ENSSDUG00000023597	ddx56	100	86.726	Seriola_dumerili
ENSTRUG00000018623	ddx56	100	85.512	ENSSLDG00000018369	ddx56	100	86.372	Seriola_lalandi_dorsalis
ENSTRUG00000018623	ddx56	74	75.862	ENSSARG00000014363	DDX56	78	71.014	Sorex_araneus
ENSTRUG00000018623	ddx56	98	68.582	ENSSPUG00000000784	DDX56	96	68.373	Sphenodon_punctatus
ENSTRUG00000018623	ddx56	95	86.220	ENSSPAG00000009392	ddx56	99	86.989	Stegastes_partitus
ENSTRUG00000018623	ddx56	99	63.536	ENSSSCG00000016745	DDX56	99	63.536	Sus_scrofa
ENSTRUG00000018623	ddx56	99	93.274	ENSTNIG00000013593	ddx56	100	93.274	Tetraodon_nigroviridis
ENSTRUG00000018623	ddx56	99	63.971	ENSTBEG00000007119	DDX56	99	63.971	Tupaia_belangeri
ENSTRUG00000018623	ddx56	87	62.090	ENSTTRG00000010552	DDX56	99	63.248	Tursiops_truncatus
ENSTRUG00000018623	ddx56	98	64.673	ENSUAMG00000014194	DDX56	98	64.673	Ursus_americanus
ENSTRUG00000018623	ddx56	98	64.673	ENSUMAG00000009666	DDX56	98	64.673	Ursus_maritimus
ENSTRUG00000018623	ddx56	98	63.738	ENSVVUG00000011905	DDX56	98	63.738	Vulpes_vulpes
ENSTRUG00000018623	ddx56	98	69.982	ENSXETG00000019000	ddx56	99	69.982	Xenopus_tropicalis
ENSTRUG00000018623	ddx56	99	82.552	ENSXCOG00000017413	ddx56	99	82.552	Xiphophorus_couchianus
ENSTRUG00000018623	ddx56	100	82.832	ENSXMAG00000018749	ddx56	100	82.832	Xiphophorus_maculatus