EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000018659 (Gene tree)
Gene ID: 101076036
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2726 bases
Position: chr6:7291455-7294180
Accession: 101076036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000047797	zf-C2H2	PF00096.26	7.6e-13	1	2
ENSTRUP00000047797	zf-C2H2	PF00096.26	7.6e-13	2	2
ENSTRUP00000047797	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000047959	-	1107	XM_003965378	ENSTRUP00000047797	368 (aa)	XP_003965427	H2VF00

Gene Model

Click here to download ENSTRUG00000018659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000018659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000018659	prdm12b	56	43.421	ENSTRUG00000012273	-	98	43.421
ENSTRUG00000018659	prdm12b	60	45.333	ENSTRUG00000006896	-	83	45.333
ENSTRUG00000018659	prdm12b	100	79.301	ENSTRUG00000013239	-	100	78.226
ENSTRUG00000018659	prdm12b	71	42.105	ENSTRUG00000013850	prdm5	93	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000018659	prdm12b	92	82.111	ENSG00000130711	PRDM12	99	76.378	Homo_sapiens
ENSTRUG00000018659	prdm12b	100	86.528	ENSAPOG00000016051	prdm12b	100	87.824	Acanthochromis_polyacanthus
ENSTRUG00000018659	prdm12b	100	66.402	ENSAPOG00000018234	-	100	66.402	Acanthochromis_polyacanthus
ENSTRUG00000018659	prdm12b	89	82.675	ENSAMEG00000016234	PRDM12	99	82.675	Ailuropoda_melanoleuca
ENSTRUG00000018659	prdm12b	100	78.497	ENSACIG00000005193	-	100	78.906	Amphilophus_citrinellus
ENSTRUG00000018659	prdm12b	100	88.594	ENSACIG00000019578	prdm12b	100	88.594	Amphilophus_citrinellus
ENSTRUG00000018659	prdm12b	100	87.863	ENSAOCG00000015040	prdm12b	100	89.182	Amphiprion_ocellaris
ENSTRUG00000018659	prdm12b	100	73.454	ENSAPEG00000022849	-	99	73.454	Amphiprion_percula
ENSTRUG00000018659	prdm12b	100	88.830	ENSAPEG00000015092	prdm12b	100	90.160	Amphiprion_percula
ENSTRUG00000018659	prdm12b	100	78.205	ENSATEG00000014595	-	96	84.592	Anabas_testudineus
ENSTRUG00000018659	prdm12b	94	81.268	ENSANAG00000020616	PRDM12	97	82.544	Aotus_nancymaae
ENSTRUG00000018659	prdm12b	100	76.010	ENSACLG00000007631	-	100	76.515	Astatotilapia_calliptera
ENSTRUG00000018659	prdm12b	100	87.228	ENSACLG00000011876	prdm12b	100	87.228	Astatotilapia_calliptera
ENSTRUG00000018659	prdm12b	100	82.385	ENSAMXG00000008540	PRDM12	100	80.978	Astyanax_mexicanus
ENSTRUG00000018659	prdm12b	100	80.800	ENSAMXG00000033665	prdm12b	100	82.400	Astyanax_mexicanus
ENSTRUG00000018659	prdm12b	92	82.405	ENSBTAG00000023797	PRDM12	99	77.867	Bos_taurus
ENSTRUG00000018659	prdm12b	92	82.111	ENSCJAG00000020540	PRDM12	99	77.807	Callithrix_jacchus
ENSTRUG00000018659	prdm12b	81	82.943	ENSCAFG00000023076	PRDM12	99	77.083	Canis_familiaris
ENSTRUG00000018659	prdm12b	92	82.405	ENSCAFG00020024046	PRDM12	99	77.249	Canis_lupus_dingo
ENSTRUG00000018659	prdm12b	92	82.405	ENSCHIG00000025005	PRDM12	99	77.660	Capra_hircus
ENSTRUG00000018659	prdm12b	86	82.812	ENSCPOG00000005901	PRDM12	95	82.812	Cavia_porcellus
ENSTRUG00000018659	prdm12b	92	82.111	ENSCCAG00000037485	PRDM12	99	77.188	Cebus_capucinus
ENSTRUG00000018659	prdm12b	92	82.111	ENSCATG00000020327	PRDM12	99	77.188	Cercocebus_atys
ENSTRUG00000018659	prdm12b	90	84.036	ENSCLAG00000005499	PRDM12	90	82.840	Chinchilla_lanigera
ENSTRUG00000018659	prdm12b	92	82.111	ENSCSAG00000014756	PRDM12	99	76.984	Chlorocebus_sabaeus
ENSTRUG00000018659	prdm12b	100	79.459	ENSCPBG00000022628	PRDM12	99	79.189	Chrysemys_picta_bellii
ENSTRUG00000018659	prdm12b	92	82.405	ENSCGRG00001015005	Prdm12	99	76.842	Cricetulus_griseus_chok1gshd
ENSTRUG00000018659	prdm12b	100	77.296	ENSCVAG00000000944	-	100	77.296	Cyprinodon_variegatus
ENSTRUG00000018659	prdm12b	100	85.829	ENSCVAG00000017166	prdm12b	100	86.898	Cyprinodon_variegatus
ENSTRUG00000018659	prdm12b	100	84.054	ENSDARG00000007430	prdm12b	100	83.333	Danio_rerio
ENSTRUG00000018659	prdm12b	92	81.871	ENSDNOG00000042302	PRDM12	99	76.720	Dasypus_novemcinctus
ENSTRUG00000018659	prdm12b	85	64.809	ENSEBUG00000016780	prdm12b	74	65.089	Eptatretus_burgeri
ENSTRUG00000018659	prdm12b	94	81.556	ENSEASG00005008472	PRDM12	99	77.660	Equus_asinus_asinus
ENSTRUG00000018659	prdm12b	94	81.556	ENSECAG00000005933	PRDM12	99	77.660	Equus_caballus
ENSTRUG00000018659	prdm12b	100	82.133	ENSELUG00000009905	prdm12b	100	81.067	Esox_lucius
ENSTRUG00000018659	prdm12b	100	82.065	ENSELUG00000013674	PRDM12	100	81.053	Esox_lucius
ENSTRUG00000018659	prdm12b	92	82.405	ENSFCAG00000043086	PRDM12	99	77.454	Felis_catus
ENSTRUG00000018659	prdm12b	100	79.459	ENSFALG00000001445	PRDM12	89	79.189	Ficedula_albicollis
ENSTRUG00000018659	prdm12b	100	84.840	ENSFHEG00000003944	prdm12b	100	86.702	Fundulus_heteroclitus
ENSTRUG00000018659	prdm12b	100	77.041	ENSFHEG00000007746	-	100	76.531	Fundulus_heteroclitus
ENSTRUG00000018659	prdm12b	100	83.905	ENSGMOG00000011797	prdm12b	100	83.245	Gadus_morhua
ENSTRUG00000018659	prdm12b	100	79.459	ENSGALG00000003895	PRDM12	99	79.189	Gallus_gallus
ENSTRUG00000018659	prdm12b	100	86.243	ENSGAFG00000010827	prdm12b	99	87.302	Gambusia_affinis
ENSTRUG00000018659	prdm12b	100	89.544	ENSGACG00000016713	prdm12b	99	88.472	Gasterosteus_aculeatus
ENSTRUG00000018659	prdm12b	100	79.459	ENSGAGG00000014083	PRDM12	99	79.189	Gopherus_agassizii
ENSTRUG00000018659	prdm12b	92	81.818	ENSGGOG00000010568	PRDM12	99	76.316	Gorilla_gorilla
ENSTRUG00000018659	prdm12b	100	88.235	ENSHBUG00000022878	prdm12b	100	89.572	Haplochromis_burtoni
ENSTRUG00000018659	prdm12b	100	76.010	ENSHBUG00000022537	-	93	76.515	Haplochromis_burtoni
ENSTRUG00000018659	prdm12b	90	83.735	ENSHGLG00000013939	PRDM12	99	76.253	Heterocephalus_glaber_female
ENSTRUG00000018659	prdm12b	100	73.458	ENSHCOG00000021167	-	100	72.654	Hippocampus_comes
ENSTRUG00000018659	prdm12b	90	84.012	ENSHCOG00000003663	prdm12b	100	78.173	Hippocampus_comes
ENSTRUG00000018659	prdm12b	100	80.707	ENSIPUG00000019544	PRDM12	100	79.891	Ictalurus_punctatus
ENSTRUG00000018659	prdm12b	100	83.200	ENSIPUG00000017053	prdm12b	100	83.378	Ictalurus_punctatus
ENSTRUG00000018659	prdm12b	97	78.846	ENSSTOG00000005986	PRDM12	86	82.840	Ictidomys_tridecemlineatus
ENSTRUG00000018659	prdm12b	90	84.036	ENSJJAG00000005424	Prdm12	98	84.036	Jaculus_jaculus
ENSTRUG00000018659	prdm12b	94	81.034	ENSKMAG00000021205	-	94	80.114	Kryptolebias_marmoratus
ENSTRUG00000018659	prdm12b	100	79.902	ENSKMAG00000016921	prdm12b	100	80.882	Kryptolebias_marmoratus
ENSTRUG00000018659	prdm12b	100	78.906	ENSLBEG00000007776	-	100	77.604	Labrus_bergylta
ENSTRUG00000018659	prdm12b	100	87.368	ENSLBEG00000017769	prdm12b	100	87.632	Labrus_bergylta
ENSTRUG00000018659	prdm12b	100	81.081	ENSLACG00000017560	PRDM12	99	81.081	Latimeria_chalumnae
ENSTRUG00000018659	prdm12b	100	82.210	ENSLOCG00000005429	prdm12b	99	82.796	Lepisosteus_oculatus
ENSTRUG00000018659	prdm12b	92	80.980	ENSLAFG00000006979	PRDM12	90	81.871	Loxodonta_africana
ENSTRUG00000018659	prdm12b	100	76.738	ENSMFAG00000040322	PRDM12	99	76.115	Macaca_fascicularis
ENSTRUG00000018659	prdm12b	92	82.111	ENSMNEG00000037234	PRDM12	99	77.188	Macaca_nemestrina
ENSTRUG00000018659	prdm12b	100	89.920	ENSMAMG00000013212	prdm12b	100	90.186	Mastacembelus_armatus
ENSTRUG00000018659	prdm12b	100	74.430	ENSMAMG00000018988	-	100	74.937	Mastacembelus_armatus
ENSTRUG00000018659	prdm12b	100	75.628	ENSMZEG00005000415	PRDM12	100	76.131	Maylandia_zebra
ENSTRUG00000018659	prdm12b	98	79.121	ENSMGAG00000005438	PRDM12	98	78.846	Meleagris_gallopavo
ENSTRUG00000018659	prdm12b	100	77.688	ENSMAUG00000013040	Prdm12	99	76.115	Mesocricetus_auratus
ENSTRUG00000018659	prdm12b	93	81.739	ENSMICG00000015480	PRDM12	99	76.455	Microcebus_murinus
ENSTRUG00000018659	prdm12b	96	80.618	ENSMOCG00000021026	Prdm12	90	83.136	Microtus_ochrogaster
ENSTRUG00000018659	prdm12b	100	79.730	ENSMODG00000012108	PRDM12	99	79.730	Monodelphis_domestica
ENSTRUG00000018659	prdm12b	84	86.032	ENSMALG00000021901	prdm12b	99	74.531	Monopterus_albus
ENSTRUG00000018659	prdm12b	92	82.405	MGP_CAROLIEiJ_G0023414	Prdm12	99	77.045	Mus_caroli
ENSTRUG00000018659	prdm12b	92	82.405	ENSMUSG00000079466	Prdm12	99	77.045	Mus_musculus
ENSTRUG00000018659	prdm12b	92	82.405	MGP_PahariEiJ_G0024871	Prdm12	99	77.045	Mus_pahari
ENSTRUG00000018659	prdm12b	92	82.405	MGP_SPRETEiJ_G0024331	Prdm12	99	77.045	Mus_spretus
ENSTRUG00000018659	prdm12b	90	83.434	ENSNGAG00000018480	Prdm12	99	77.568	Nannospalax_galili
ENSTRUG00000018659	prdm12b	100	74.202	ENSNBRG00000024312	-	100	74.734	Neolamprologus_brichardi
ENSTRUG00000018659	prdm12b	100	87.798	ENSNBRG00000006727	prdm12b	100	87.798	Neolamprologus_brichardi
ENSTRUG00000018659	prdm12b	100	71.892	ENSMEUG00000003828	PRDM12	99	71.698	Notamacropus_eugenii
ENSTRUG00000018659	prdm12b	90	83.735	ENSOPRG00000008680	PRDM12	98	83.735	Ochotona_princeps
ENSTRUG00000018659	prdm12b	98	79.501	ENSODEG00000016282	PRDM12	62	82.544	Octodon_degus
ENSTRUG00000018659	prdm12b	63	78.448	ENSOANG00000001043	PRDM12	100	78.448	Ornithorhynchus_anatinus
ENSTRUG00000018659	prdm12b	88	80.061	ENSOCUG00000008241	PRDM12	96	83.388	Oryctolagus_cuniculus
ENSTRUG00000018659	prdm12b	100	76.590	ENSORLG00000017558	-	100	76.845	Oryzias_latipes
ENSTRUG00000018659	prdm12b	100	84.514	ENSORLG00000007114	prdm12b	99	84.514	Oryzias_latipes
ENSTRUG00000018659	prdm12b	100	76.650	ENSORLG00020013167	-	100	76.650	Oryzias_latipes_hni
ENSTRUG00000018659	prdm12b	100	84.073	ENSORLG00020019565	prdm12b	99	84.073	Oryzias_latipes_hni
ENSTRUG00000018659	prdm12b	100	76.590	ENSORLG00015003435	-	100	76.531	Oryzias_latipes_hsok
ENSTRUG00000018659	prdm12b	100	85.263	ENSORLG00015007621	prdm12b	99	85.263	Oryzias_latipes_hsok
ENSTRUG00000018659	prdm12b	100	84.115	ENSOMEG00000004134	prdm12b	99	84.375	Oryzias_melastigma
ENSTRUG00000018659	prdm12b	100	77.922	ENSOMEG00000007762	-	100	77.922	Oryzias_melastigma
ENSTRUG00000018659	prdm12b	90	84.036	ENSOGAG00000007557	PRDM12	97	84.036	Otolemur_garnettii
ENSTRUG00000018659	prdm12b	79	80.952	ENSPPAG00000031506	-	99	79.667	Pan_paniscus
ENSTRUG00000018659	prdm12b	100	73.046	ENSPPRG00000023024	PRDM12	92	73.046	Panthera_pardus
ENSTRUG00000018659	prdm12b	92	82.111	ENSPTRG00000021475	PRDM12	99	76.579	Pan_troglodytes
ENSTRUG00000018659	prdm12b	92	82.111	ENSPTRG00000043324	-	99	76.579	Pan_troglodytes
ENSTRUG00000018659	prdm12b	92	82.111	ENSPANG00000025967	PRDM12	99	77.188	Papio_anubis
ENSTRUG00000018659	prdm12b	90	81.818	ENSPKIG00000004305	PRDM12	94	81.818	Paramormyrops_kingsleyae
ENSTRUG00000018659	prdm12b	100	82.667	ENSPKIG00000007228	prdm12b	100	82.933	Paramormyrops_kingsleyae
ENSTRUG00000018659	prdm12b	100	79.459	ENSPSIG00000006739	PRDM12	99	79.189	Pelodiscus_sinensis
ENSTRUG00000018659	prdm12b	100	75.452	ENSPMGG00000002356	-	100	74.677	Periophthalmus_magnuspinnatus
ENSTRUG00000018659	prdm12b	100	88.347	ENSPMGG00000008867	prdm12b	99	88.618	Periophthalmus_magnuspinnatus
ENSTRUG00000018659	prdm12b	90	84.036	ENSPEMG00000009969	Prdm12	91	82.840	Peromyscus_maniculatus_bairdii
ENSTRUG00000018659	prdm12b	100	79.730	ENSPCIG00000024119	PRDM12	99	79.730	Phascolarctos_cinereus
ENSTRUG00000018659	prdm12b	100	86.968	ENSPFOG00000019841	prdm12b	100	86.170	Poecilia_formosa
ENSTRUG00000018659	prdm12b	100	86.016	ENSPLAG00000016626	prdm12b	99	87.071	Poecilia_latipinna
ENSTRUG00000018659	prdm12b	96	86.104	ENSPMEG00000016698	prdm12b	99	87.123	Poecilia_mexicana
ENSTRUG00000018659	prdm12b	95	75.978	ENSPREG00000003211	-	94	75.978	Poecilia_reticulata
ENSTRUG00000018659	prdm12b	100	85.602	ENSPREG00000015073	prdm12b	99	86.842	Poecilia_reticulata
ENSTRUG00000018659	prdm12b	94	81.268	ENSPPYG00000019694	PRDM12	92	83.735	Pongo_abelii
ENSTRUG00000018659	prdm12b	92	82.405	ENSPCOG00000022255	PRDM12	99	76.842	Propithecus_coquereli
ENSTRUG00000018659	prdm12b	92	82.405	ENSPVAG00000001511	PRDM12	99	77.480	Pteropus_vampyrus
ENSTRUG00000018659	prdm12b	100	75.628	ENSPNYG00000013589	-	100	76.131	Pundamilia_nyererei
ENSTRUG00000018659	prdm12b	100	87.500	ENSPNYG00000009607	prdm12b	100	87.500	Pundamilia_nyererei
ENSTRUG00000018659	prdm12b	100	82.210	ENSPNAG00000024532	prdm12b	100	82.306	Pygocentrus_nattereri
ENSTRUG00000018659	prdm12b	100	80.267	ENSPNAG00000013396	PRDM12	100	79.733	Pygocentrus_nattereri
ENSTRUG00000018659	prdm12b	92	82.405	ENSRNOG00000009218	Prdm12	99	77.045	Rattus_norvegicus
ENSTRUG00000018659	prdm12b	88	83.333	ENSRBIG00000042712	PRDM12	91	81.306	Rhinopithecus_bieti
ENSTRUG00000018659	prdm12b	89	83.537	ENSRROG00000043554	PRDM12	99	83.537	Rhinopithecus_roxellana
ENSTRUG00000018659	prdm12b	100	79.245	ENSSHAG00000015972	PRDM12	99	79.245	Sarcophilus_harrisii
ENSTRUG00000018659	prdm12b	100	85.090	ENSSMAG00000003754	prdm12b	100	85.604	Scophthalmus_maximus
ENSTRUG00000018659	prdm12b	100	78.351	ENSSDUG00000019071	-	100	78.093	Seriola_dumerili
ENSTRUG00000018659	prdm12b	100	89.239	ENSSDUG00000023498	prdm12b	100	89.239	Seriola_dumerili
ENSTRUG00000018659	prdm12b	100	88.714	ENSSLDG00000009557	prdm12b	100	88.714	Seriola_lalandi_dorsalis
ENSTRUG00000018659	prdm12b	100	78.649	ENSSLDG00000013562	-	100	78.378	Seriola_lalandi_dorsalis
ENSTRUG00000018659	prdm12b	100	80.000	ENSSPUG00000013424	PRDM12	99	79.730	Sphenodon_punctatus
ENSTRUG00000018659	prdm12b	100	86.579	ENSSPAG00000018824	prdm12b	100	86.579	Stegastes_partitus
ENSTRUG00000018659	prdm12b	100	70.619	ENSSPAG00000022420	-	100	71.391	Stegastes_partitus
ENSTRUG00000018659	prdm12b	92	82.405	ENSSSCG00000005703	PRDM12	99	77.249	Sus_scrofa
ENSTRUG00000018659	prdm12b	100	76.819	ENSTNIG00000005859	-	99	75.472	Tetraodon_nigroviridis
ENSTRUG00000018659	prdm12b	100	96.196	ENSTNIG00000009020	prdm12b	99	96.196	Tetraodon_nigroviridis
ENSTRUG00000018659	prdm12b	92	82.405	ENSUAMG00000009653	PRDM12	90	84.036	Ursus_americanus
ENSTRUG00000018659	prdm12b	90	84.036	ENSVVUG00000027662	PRDM12	79	82.840	Vulpes_vulpes
ENSTRUG00000018659	prdm12b	100	86.898	ENSXCOG00000002836	prdm12b	99	86.702	Xiphophorus_couchianus
ENSTRUG00000018659	prdm12b	100	85.942	ENSXMAG00000005537	prdm12b	100	85.752	Xiphophorus_maculatus
ENSTRUG00000018659	prdm12b	100	76.350	ENSXMAG00000028012	-	100	75.255	Xiphophorus_maculatus