EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000019558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 930 bases
Position: chrHE592259.1:166-1095
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000032190	zf-C2H2	PF00096.26	1.1e-24	1	4
ENSTRUP00000032190	zf-C2H2	PF00096.26	1.1e-24	2	4
ENSTRUP00000032190	zf-C2H2	PF00096.26	1.1e-24	3	4
ENSTRUP00000032190	zf-C2H2	PF00096.26	1.1e-24	4	4
ENSTRUP00000032190	zf-met	PF12874.7	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000032314	-	849	-	ENSTRUP00000032190	282 (aa)	-	H2U5H4

Gene Model

Click here to download ENSTRUG00000019558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000019558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000019558	-	81	77.778	ENSTRUG00000011637	scrt1b	86	77.778
ENSTRUG00000019558	-	58	32.143	ENSTRUG00000005880	-	54	32.824
ENSTRUG00000019558	-	56	37.500	ENSTRUG00000013850	prdm5	60	38.636
ENSTRUG00000019558	-	50	57.857	ENSTRUG00000025588	snai2	52	59.259
ENSTRUG00000019558	-	82	44.000	ENSTRUG00000017456	znf236	57	44.000
ENSTRUG00000019558	-	53	40.000	ENSTRUG00000001268	-	94	39.604
ENSTRUG00000019558	-	75	35.556	ENSTRUG00000022066	-	88	34.586
ENSTRUG00000019558	-	57	37.748	ENSTRUG00000003454	-	60	39.394
ENSTRUG00000019558	-	54	34.831	ENSTRUG00000001452	PRDM15	52	34.831
ENSTRUG00000019558	-	53	36.364	ENSTRUG00000024008	-	52	36.364
ENSTRUG00000019558	-	51	47.436	ENSTRUG00000019685	znf319b	60	47.436
ENSTRUG00000019558	-	52	40.789	ENSTRUG00000005321	-	93	40.789
ENSTRUG00000019558	-	76	39.175	ENSTRUG00000015687	-	92	39.175
ENSTRUG00000019558	-	52	35.606	ENSTRUG00000024073	-	62	35.606
ENSTRUG00000019558	-	51	41.860	ENSTRUG00000012273	-	74	41.860
ENSTRUG00000019558	-	85	38.095	ENSTRUG00000022076	-	78	39.416
ENSTRUG00000019558	-	77	31.897	ENSTRUG00000007022	-	57	41.045
ENSTRUG00000019558	-	66	39.098	ENSTRUG00000014476	-	78	40.000
ENSTRUG00000019558	-	51	44.872	ENSTRUG00000020582	-	84	44.872
ENSTRUG00000019558	-	55	38.000	ENSTRUG00000003277	zbtb17	90	35.000
ENSTRUG00000019558	-	60	35.238	ENSTRUG00000022843	-	50	35.238
ENSTRUG00000019558	-	54	42.727	ENSTRUG00000006896	-	81	42.727
ENSTRUG00000019558	-	56	38.636	ENSTRUG00000021675	-	64	38.636
ENSTRUG00000019558	-	77	65.863	ENSTRUG00000007620	scrt2	83	63.454
ENSTRUG00000019558	-	69	38.346	ENSTRUG00000019483	-	100	38.406
ENSTRUG00000019558	-	55	46.154	ENSTRUG00000012157	-	62	46.154
ENSTRUG00000019558	-	51	40.152	ENSTRUG00000013906	-	89	40.152
ENSTRUG00000019558	-	54	41.045	ENSTRUG00000000995	-	69	41.045
ENSTRUG00000019558	-	82	89.494	ENSTRUG00000012719	-	86	89.494

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000019558	-	78	68.776	ENSAPOG00000003680	scrt2	83	67.089	Acanthochromis_polyacanthus
ENSTRUG00000019558	-	82	87.288	ENSAPOG00000015197	-	85	86.441	Acanthochromis_polyacanthus
ENSTRUG00000019558	-	81	78.279	ENSAPOG00000009279	scrt1b	86	78.279	Acanthochromis_polyacanthus
ENSTRUG00000019558	-	78	63.071	ENSACIG00000001296	-	79	59.533	Amphilophus_citrinellus
ENSTRUG00000019558	-	77	68.803	ENSACIG00000012604	scrt2	81	67.094	Amphilophus_citrinellus
ENSTRUG00000019558	-	78	81.166	ENSACIG00000013613	scrt1b	77	81.166	Amphilophus_citrinellus
ENSTRUG00000019558	-	82	82.558	ENSACIG00000006586	-	86	82.558	Amphilophus_citrinellus
ENSTRUG00000019558	-	82	83.333	ENSAOCG00000023304	-	86	82.558	Amphiprion_ocellaris
ENSTRUG00000019558	-	81	78.279	ENSAOCG00000003910	scrt1b	86	78.279	Amphiprion_ocellaris
ENSTRUG00000019558	-	78	68.776	ENSAOCG00000021557	scrt2	83	67.089	Amphiprion_ocellaris
ENSTRUG00000019558	-	82	83.333	ENSAPEG00000005677	-	86	82.558	Amphiprion_percula
ENSTRUG00000019558	-	81	77.917	ENSAPEG00000000869	scrt1b	86	77.917	Amphiprion_percula
ENSTRUG00000019558	-	78	68.776	ENSAPEG00000022558	scrt2	83	67.089	Amphiprion_percula
ENSTRUG00000019558	-	81	76.735	ENSATEG00000002302	scrt1b	86	77.869	Anabas_testudineus
ENSTRUG00000019558	-	78	57.812	ENSATEG00000003195	-	81	57.812	Anabas_testudineus
ENSTRUG00000019558	-	79	65.759	ENSATEG00000023998	scrt2	81	64.981	Anabas_testudineus
ENSTRUG00000019558	-	82	87.446	ENSATEG00000011660	-	85	86.580	Anabas_testudineus
ENSTRUG00000019558	-	72	76.961	ENSACAG00000016109	SCRT2	93	76.961	Anolis_carolinensis
ENSTRUG00000019558	-	82	79.008	ENSACLG00000012046	-	86	78.244	Astatotilapia_calliptera
ENSTRUG00000019558	-	81	77.869	ENSACLG00000007162	scrt1b	86	77.869	Astatotilapia_calliptera
ENSTRUG00000019558	-	81	77.642	ENSAMXG00000038085	scrt1a	86	77.642	Astyanax_mexicanus
ENSTRUG00000019558	-	79	67.901	ENSAMXG00000034158	scrt2	88	67.901	Astyanax_mexicanus
ENSTRUG00000019558	-	87	70.566	ENSAMXG00000042624	SCRT1	94	70.566	Astyanax_mexicanus
ENSTRUG00000019558	-	57	61.111	WBGene00000468	ces-1	60	59.146	Caenorhabditis_elegans
ENSTRUG00000019558	-	81	76.955	ENSCPBG00000018899	SCRT1	86	76.955	Chrysemys_picta_bellii
ENSTRUG00000019558	-	82	63.025	ENSCPBG00000027613	SCRT2	90	63.025	Chrysemys_picta_bellii
ENSTRUG00000019558	-	82	82.558	ENSCSEG00000014892	-	86	81.783	Cynoglossus_semilaevis
ENSTRUG00000019558	-	81	77.459	ENSCSEG00000008596	scrt1b	86	78.279	Cynoglossus_semilaevis
ENSTRUG00000019558	-	79	66.148	ENSCSEG00000021542	scrt2	82	63.424	Cynoglossus_semilaevis
ENSTRUG00000019558	-	81	77.083	ENSCVAG00000009561	scrt1b	86	77.083	Cyprinodon_variegatus
ENSTRUG00000019558	-	82	82.558	ENSCVAG00000003190	-	86	81.783	Cyprinodon_variegatus
ENSTRUG00000019558	-	79	63.813	ENSCVAG00000021038	scrt2	81	63.424	Cyprinodon_variegatus
ENSTRUG00000019558	-	81	76.543	ENSDARG00000040214	scrt1b	86	76.543	Danio_rerio
ENSTRUG00000019558	-	81	77.778	ENSDARG00000100821	scrt1a	86	77.778	Danio_rerio
ENSTRUG00000019558	-	82	77.551	ENSELUG00000022228	scrt1a	86	77.551	Esox_lucius
ENSTRUG00000019558	-	83	62.271	ENSELUG00000023883	scrt2	86	61.397	Esox_lucius
ENSTRUG00000019558	-	80	78.423	ENSELUG00000005435	scrt1b	85	78.423	Esox_lucius
ENSTRUG00000019558	-	78	72.807	ENSFALG00000005718	SCRT2	97	72.807	Ficedula_albicollis
ENSTRUG00000019558	-	51	90.909	ENSFDAG00000008733	SCRT1	63	91.429	Fukomys_damarensis
ENSTRUG00000019558	-	78	68.908	ENSFHEG00000005732	scrt2	85	68.487	Fundulus_heteroclitus
ENSTRUG00000019558	-	81	77.500	ENSFHEG00000014820	scrt1b	86	77.500	Fundulus_heteroclitus
ENSTRUG00000019558	-	82	84.109	ENSFHEG00000009794	-	86	83.333	Fundulus_heteroclitus
ENSTRUG00000019558	-	81	80.328	ENSGMOG00000000629	scrt1b	87	80.328	Gadus_morhua
ENSTRUG00000019558	-	67	81.481	ENSGALG00000028912	SCRT2	89	68.016	Gallus_gallus
ENSTRUG00000019558	-	81	77.500	ENSGAFG00000007636	scrt1b	86	77.500	Gambusia_affinis
ENSTRUG00000019558	-	79	64.981	ENSGAFG00000003093	scrt2	84	64.591	Gambusia_affinis
ENSTRUG00000019558	-	70	94.975	ENSGAFG00000009650	-	74	93.970	Gambusia_affinis
ENSTRUG00000019558	-	80	78.512	ENSGACG00000008982	scrt1b	87	78.512	Gasterosteus_aculeatus
ENSTRUG00000019558	-	82	81.176	ENSGACG00000004072	-	86	80.784	Gasterosteus_aculeatus
ENSTRUG00000019558	-	85	74.206	ENSGAGG00000011736	SCRT1	91	74.206	Gopherus_agassizii
ENSTRUG00000019558	-	91	65.530	ENSGAGG00000020761	SCRT2	83	72.174	Gopherus_agassizii
ENSTRUG00000019558	-	83	67.094	ENSGAGG00000020760	-	89	67.094	Gopherus_agassizii
ENSTRUG00000019558	-	81	77.869	ENSHBUG00000016621	scrt1b	86	77.869	Haplochromis_burtoni
ENSTRUG00000019558	-	82	82.171	ENSHBUG00000019101	-	86	82.171	Haplochromis_burtoni
ENSTRUG00000019558	-	78	69.198	ENSHBUG00000012492	scrt2	83	66.667	Haplochromis_burtoni
ENSTRUG00000019558	-	82	64.151	ENSHCOG00000008116	scrt2	89	62.642	Hippocampus_comes
ENSTRUG00000019558	-	80	80.172	ENSHCOG00000016179	-	82	80.603	Hippocampus_comes
ENSTRUG00000019558	-	81	77.083	ENSHCOG00000016704	scrt1b	86	77.083	Hippocampus_comes
ENSTRUG00000019558	-	80	75.424	ENSIPUG00000005547	-	88	75.424	Ictalurus_punctatus
ENSTRUG00000019558	-	80	77.959	ENSIPUG00000004551	scrt1a	85	77.959	Ictalurus_punctatus
ENSTRUG00000019558	-	50	85.816	ENSSTOG00000032944	SCRT2	77	85.417	Ictidomys_tridecemlineatus
ENSTRUG00000019558	-	79	65.370	ENSKMAG00000018087	scrt2	81	64.591	Kryptolebias_marmoratus
ENSTRUG00000019558	-	81	77.500	ENSKMAG00000005484	scrt1b	86	77.500	Kryptolebias_marmoratus
ENSTRUG00000019558	-	81	79.151	ENSKMAG00000009489	-	87	80.695	Kryptolebias_marmoratus
ENSTRUG00000019558	-	82	82.946	ENSLBEG00000023388	-	87	84.109	Labrus_bergylta
ENSTRUG00000019558	-	79	64.729	ENSLBEG00000015419	scrt2	81	63.953	Labrus_bergylta
ENSTRUG00000019558	-	85	75.781	ENSLACG00000003588	SCRT1	90	75.781	Latimeria_chalumnae
ENSTRUG00000019558	-	81	78.601	ENSLOCG00000007573	scrt1b	86	78.601	Lepisosteus_oculatus
ENSTRUG00000019558	-	81	76.735	ENSMAMG00000011698	scrt1b	86	77.869	Mastacembelus_armatus
ENSTRUG00000019558	-	79	64.368	ENSMAMG00000001291	scrt2	81	63.813	Mastacembelus_armatus
ENSTRUG00000019558	-	82	82.171	ENSMZEG00005026702	-	86	82.171	Maylandia_zebra
ENSTRUG00000019558	-	81	77.869	ENSMZEG00005005627	scrt1b	86	77.869	Maylandia_zebra
ENSTRUG00000019558	-	78	69.198	ENSMZEG00005026445	scrt2	83	66.667	Maylandia_zebra
ENSTRUG00000019558	-	67	81.481	ENSMGAG00000016579	SCRT2	97	71.806	Meleagris_gallopavo
ENSTRUG00000019558	-	82	84.436	ENSMMOG00000018345	-	86	84.436	Mola_mola
ENSTRUG00000019558	-	81	75.820	ENSMMOG00000003327	scrt1b	86	75.820	Mola_mola
ENSTRUG00000019558	-	79	64.567	ENSMMOG00000009272	scrt2	80	63.780	Mola_mola
ENSTRUG00000019558	-	81	77.143	ENSMALG00000012704	scrt1b	86	78.279	Monopterus_albus
ENSTRUG00000019558	-	78	68.487	ENSMALG00000013656	scrt2	82	66.807	Monopterus_albus
ENSTRUG00000019558	-	53	81.333	ENSNGAG00000020815	Scrt2	70	84.722	Nannospalax_galili
ENSTRUG00000019558	-	78	68.776	ENSNBRG00000007221	scrt2	83	66.245	Neolamprologus_brichardi
ENSTRUG00000019558	-	82	77.733	ENSNBRG00000013983	scrt1b	87	77.733	Neolamprologus_brichardi
ENSTRUG00000019558	-	82	82.171	ENSNBRG00000014882	-	86	82.171	Neolamprologus_brichardi
ENSTRUG00000019558	-	81	77.459	ENSONIG00000006007	scrt1b	86	77.459	Oreochromis_niloticus
ENSTRUG00000019558	-	80	81.890	ENSONIG00000019809	-	83	81.890	Oreochromis_niloticus
ENSTRUG00000019558	-	78	62.712	ENSONIG00000003152	-	83	62.712	Oreochromis_niloticus
ENSTRUG00000019558	-	79	65.370	ENSONIG00000016758	scrt2	81	62.646	Oreochromis_niloticus
ENSTRUG00000019558	-	81	76.639	ENSORLG00000025651	scrt1b	85	77.778	Oryzias_latipes
ENSTRUG00000019558	-	79	64.202	ENSORLG00000024051	scrt2	81	63.813	Oryzias_latipes
ENSTRUG00000019558	-	82	77.863	ENSORLG00000022825	-	87	77.863	Oryzias_latipes
ENSTRUG00000019558	-	79	64.202	ENSORLG00020011478	scrt2	81	63.813	Oryzias_latipes_hni
ENSTRUG00000019558	-	81	76.639	ENSORLG00020012967	scrt1b	85	77.778	Oryzias_latipes_hni
ENSTRUG00000019558	-	81	78.161	ENSORLG00015010104	-	87	78.161	Oryzias_latipes_hsok
ENSTRUG00000019558	-	79	64.202	ENSORLG00015005524	scrt2	81	63.813	Oryzias_latipes_hsok
ENSTRUG00000019558	-	81	76.639	ENSORLG00015019165	scrt1b	85	77.778	Oryzias_latipes_hsok
ENSTRUG00000019558	-	81	76.639	ENSOMEG00000003925	scrt1b	85	77.778	Oryzias_melastigma
ENSTRUG00000019558	-	82	80.620	ENSOMEG00000000286	-	87	80.620	Oryzias_melastigma
ENSTRUG00000019558	-	79	64.591	ENSOMEG00000002661	scrt2	81	64.202	Oryzias_melastigma
ENSTRUG00000019558	-	81	78.189	ENSPKIG00000022303	SCRT1	86	78.189	Paramormyrops_kingsleyae
ENSTRUG00000019558	-	81	77.778	ENSPKIG00000020085	scrt1a	86	77.778	Paramormyrops_kingsleyae
ENSTRUG00000019558	-	80	81.928	ENSPMGG00000021402	-	85	81.928	Periophthalmus_magnuspinnatus
ENSTRUG00000019558	-	78	70.339	ENSPMGG00000016561	scrt2	83	70.339	Periophthalmus_magnuspinnatus
ENSTRUG00000019558	-	81	77.049	ENSPMGG00000002260	scrt1b	88	77.049	Periophthalmus_magnuspinnatus
ENSTRUG00000019558	-	81	77.500	ENSPFOG00000017719	scrt1b	86	77.500	Poecilia_formosa
ENSTRUG00000019558	-	83	83.142	ENSPFOG00000005616	-	87	82.946	Poecilia_formosa
ENSTRUG00000019558	-	79	64.202	ENSPFOG00000007738	scrt2	81	63.813	Poecilia_formosa
ENSTRUG00000019558	-	81	77.500	ENSPLAG00000009876	scrt1b	86	77.500	Poecilia_latipinna
ENSTRUG00000019558	-	82	83.721	ENSPLAG00000011718	-	87	82.946	Poecilia_latipinna
ENSTRUG00000019558	-	78	68.908	ENSPLAG00000005765	scrt2	84	68.908	Poecilia_latipinna
ENSTRUG00000019558	-	82	83.721	ENSPMEG00000011706	-	87	82.946	Poecilia_mexicana
ENSTRUG00000019558	-	78	68.908	ENSPMEG00000001538	scrt2	84	68.908	Poecilia_mexicana
ENSTRUG00000019558	-	81	77.500	ENSPMEG00000013274	scrt1b	86	77.500	Poecilia_mexicana
ENSTRUG00000019558	-	81	77.500	ENSPREG00000018985	scrt1b	86	77.500	Poecilia_reticulata
ENSTRUG00000019558	-	82	84.109	ENSPREG00000012166	-	87	83.333	Poecilia_reticulata
ENSTRUG00000019558	-	79	64.202	ENSPREG00000001147	scrt2	81	63.813	Poecilia_reticulata
ENSTRUG00000019558	-	78	69.198	ENSPNYG00000013109	scrt2	83	66.667	Pundamilia_nyererei
ENSTRUG00000019558	-	82	81.783	ENSPNYG00000008865	-	86	81.783	Pundamilia_nyererei
ENSTRUG00000019558	-	81	77.869	ENSPNYG00000017733	scrt1b	86	77.869	Pundamilia_nyererei
ENSTRUG00000019558	-	81	77.273	ENSPNAG00000017415	scrt1a	86	77.273	Pygocentrus_nattereri
ENSTRUG00000019558	-	80	75.309	ENSPNAG00000027880	-	86	75.309	Pygocentrus_nattereri
ENSTRUG00000019558	-	81	78.601	ENSSFOG00015001195	SCRT1	86	78.601	Scleropages_formosus
ENSTRUG00000019558	-	82	80.916	ENSSMAG00000005122	-	87	80.153	Scophthalmus_maximus
ENSTRUG00000019558	-	82	77.642	ENSSMAG00000019207	scrt1b	86	77.642	Scophthalmus_maximus
ENSTRUG00000019558	-	81	78.279	ENSSDUG00000007752	scrt1b	86	78.279	Seriola_dumerili
ENSTRUG00000019558	-	82	82.171	ENSSDUG00000013215	-	86	81.395	Seriola_dumerili
ENSTRUG00000019558	-	78	65.490	ENSSDUG00000001637	scrt2	83	62.353	Seriola_dumerili
ENSTRUG00000019558	-	81	78.279	ENSSLDG00000017166	scrt1b	86	78.279	Seriola_lalandi_dorsalis
ENSTRUG00000019558	-	79	64.981	ENSSLDG00000013565	scrt2	81	62.646	Seriola_lalandi_dorsalis
ENSTRUG00000019558	-	82	82.171	ENSSLDG00000016454	-	86	81.395	Seriola_lalandi_dorsalis
ENSTRUG00000019558	-	78	74.009	ENSSPUG00000018637	SCRT2	83	74.009	Sphenodon_punctatus
ENSTRUG00000019558	-	82	81.783	ENSSPAG00000006788	-	86	82.558	Stegastes_partitus
ENSTRUG00000019558	-	78	69.620	ENSSPAG00000014018	scrt2	83	67.089	Stegastes_partitus
ENSTRUG00000019558	-	81	78.279	ENSSPAG00000002200	scrt1b	86	78.279	Stegastes_partitus
ENSTRUG00000019558	-	78	72.687	ENSTGUG00000006801	SCRT2	99	72.687	Taeniopygia_guttata
ENSTRUG00000019558	-	79	67.355	ENSTNIG00000012473	scrt2	84	66.942	Tetraodon_nigroviridis
ENSTRUG00000019558	-	81	77.459	ENSTNIG00000018384	scrt1b	86	77.459	Tetraodon_nigroviridis
ENSTRUG00000019558	-	81	77.500	ENSXCOG00000019675	scrt1b	86	77.500	Xiphophorus_couchianus
ENSTRUG00000019558	-	79	63.813	ENSXCOG00000014367	scrt2	84	63.424	Xiphophorus_couchianus
ENSTRUG00000019558	-	70	95.477	ENSXCOG00000019861	-	74	94.472	Xiphophorus_couchianus
ENSTRUG00000019558	-	79	63.813	ENSXMAG00000028567	scrt2	81	63.424	Xiphophorus_maculatus
ENSTRUG00000019558	-	82	84.109	ENSXMAG00000015353	-	87	83.333	Xiphophorus_maculatus
ENSTRUG00000019558	-	81	77.500	ENSXMAG00000027885	scrt1b	86	77.500	Xiphophorus_maculatus