EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000019743 (Gene tree)
Gene ID: 101074162
Gene Symbol: polr2b
Alias: zgc:109952
Full Name: DNA-directed RNA polymerase II subunit RPB2-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2604 bases
Position: chrHE592128.1:32527-35130
Accession: 101074162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048900	RNA_pol_Rpb2_1	PF04563.15	1.7e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052750	-	723	XM_011620079	ENSTRUP00000048900	241 (aa)	XP_011618381	-

Gene Model

Click here to download ENSTRUG00000019743's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000019743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000019743	polr2b	80	96.373	ENSG00000047315	POLR2B	100	96.875	Homo_sapiens
ENSTRUG00000019743	polr2b	69	35.329	ENSCING00000018498	-	85	35.329	Ciona_intestinalis
ENSTRUG00000019743	polr2b	80	97.927	ENSDARG00000098783	polr2b	53	97.927	Danio_rerio
ENSTRUG00000019743	polr2b	68	97.576	ENSDARG00000104434	CABZ01048453.1	68	97.576	Danio_rerio
ENSTRUG00000019743	polr2b	80	98.964	ENSGAFG00000016504	POLR2B	53	98.964	Gambusia_affinis
ENSTRUG00000019743	polr2b	80	98.964	ENSLBEG00000016719	POLR2B	53	98.964	Labrus_bergylta
ENSTRUG00000019743	polr2b	80	98.964	ENSLBEG00000010055	-	53	98.964	Labrus_bergylta
ENSTRUG00000019743	polr2b	83	36.500	ENSMGAG00000012873	-	75	36.500	Meleagris_gallopavo
ENSTRUG00000019743	polr2b	80	36.598	ENSPMAG00000002089	-	68	36.598	Petromyzon_marinus
ENSTRUG00000019743	polr2b	80	98.964	ENSXCOG00000014657	POLR2B	53	98.964	Xiphophorus_couchianus