EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000019854 (Gene tree)
Gene ID: 101068017
Gene Symbol: -
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3214 bases
Position: chr12:9109790-9113003
Accession: 101068017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054555	SHS2_Rpb7-N	PF03876.17	6.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000058587	-	2394	XM_003969385	ENSTRUP00000054555	379 (aa)	XP_003969434	UPI000298B4A3

Gene Model

Click here to download ENSTRUG00000019854's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000019854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000019854	-	96	59.178	ENSCSEG00000008986	-	100	58.377	Cynoglossus_semilaevis
ENSTRUG00000019854	-	94	67.967	ENSMAMG00000010095	-	100	66.492	Mastacembelus_armatus
ENSTRUG00000019854	-	95	57.880	ENSONIG00000010857	-	99	57.256	Oreochromis_niloticus
ENSTRUG00000019854	-	95	59.358	ENSOMEG00000015768	-	99	60.779	Oryzias_melastigma
ENSTRUG00000019854	-	64	71.311	ENSPFOG00000001131	-	99	56.919	Poecilia_formosa
ENSTRUG00000019854	-	64	71.721	ENSPLAG00000019986	-	99	57.180	Poecilia_latipinna
ENSTRUG00000019854	-	64	70.492	ENSPMEG00000022232	-	99	56.397	Poecilia_mexicana
ENSTRUG00000019854	-	64	70.492	ENSPREG00000003434	-	99	56.658	Poecilia_reticulata
ENSTRUG00000019854	-	96	65.574	ENSSLDG00000013316	-	100	65.969	Seriola_lalandi_dorsalis
ENSTRUG00000019854	-	61	72.532	ENSXMAG00000023876	-	99	54.762	Xiphophorus_maculatus