EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000019869 (Gene tree)
Gene ID: 101076372
Gene Symbol: -
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8168 bases
Position: chr19:9575802-9583969
Accession: 101076372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000057575	RRM_1	PF00076.22	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057902	-	2191	XM_003973470	ENSTRUP00000057575	245 (aa)	XP_003973519	UPI000298DE3A

Gene Model

Click here to download ENSTRUG00000019869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000019869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000019869	-	63	72.050	ENSTRUG00000014826	rbm24b	100	59.921
ENSTRUG00000019869	-	63	72.152	ENSTRUG00000010089	rbm24a	100	61.044
ENSTRUG00000019869	-	96	63.636	ENSTRUG00000024954	rbm38	94	63.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000019869	-	92	68.240	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSTRUG00000019869	-	100	63.889	ENSAPOG00000003301	rbm38	98	62.846	Acanthochromis_polyacanthus
ENSTRUG00000019869	-	100	88.980	ENSAPOG00000009939	-	100	88.980	Acanthochromis_polyacanthus
ENSTRUG00000019869	-	100	61.905	ENSACIG00000000010	rbm38	98	61.024	Amphilophus_citrinellus
ENSTRUG00000019869	-	100	89.796	ENSACIG00000012502	-	100	95.763	Amphilophus_citrinellus
ENSTRUG00000019869	-	97	89.076	ENSAOCG00000012559	RBM38	100	89.076	Amphiprion_ocellaris
ENSTRUG00000019869	-	100	64.286	ENSAOCG00000013497	-	98	63.241	Amphiprion_ocellaris
ENSTRUG00000019869	-	100	64.286	ENSAPEG00000013137	rbm38	98	63.241	Amphiprion_percula
ENSTRUG00000019869	-	100	88.571	ENSAPEG00000023581	-	100	88.571	Amphiprion_percula
ENSTRUG00000019869	-	100	61.508	ENSATEG00000016366	rbm38	98	60.956	Anabas_testudineus
ENSTRUG00000019869	-	100	88.980	ENSATEG00000016710	-	100	88.980	Anabas_testudineus
ENSTRUG00000019869	-	95	65.833	ENSACAG00000016238	RBM38	95	61.355	Anolis_carolinensis
ENSTRUG00000019869	-	92	69.099	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSTRUG00000019869	-	100	88.163	ENSACLG00000019514	-	100	88.163	Astatotilapia_calliptera
ENSTRUG00000019869	-	96	62.553	ENSAMXG00000038120	rbm38	97	62.553	Astyanax_mexicanus
ENSTRUG00000019869	-	100	74.694	ENSAMXG00000015601	-	100	73.878	Astyanax_mexicanus
ENSTRUG00000019869	-	92	67.672	ENSBTAG00000008105	RBM38	89	66.234	Bos_taurus
ENSTRUG00000019869	-	92	69.099	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSTRUG00000019869	-	92	66.379	ENSCAFG00020021943	RBM38	89	64.935	Canis_lupus_dingo
ENSTRUG00000019869	-	92	66.810	ENSCHIG00000002609	RBM38	89	65.368	Capra_hircus
ENSTRUG00000019869	-	92	66.953	ENSCPOG00000012781	RBM38	89	65.948	Cavia_porcellus
ENSTRUG00000019869	-	92	69.099	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSTRUG00000019869	-	92	68.240	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSTRUG00000019869	-	92	67.382	ENSCLAG00000005906	RBM38	92	65.948	Chinchilla_lanigera
ENSTRUG00000019869	-	92	68.240	ENSCSAG00000015503	RBM38	89	66.810	Chlorocebus_sabaeus
ENSTRUG00000019869	-	95	66.946	ENSCPBG00000024059	RBM38	100	64.706	Chrysemys_picta_bellii
ENSTRUG00000019869	-	95	51.899	ENSCANG00000030105	-	80	48.945	Colobus_angolensis_palliatus
ENSTRUG00000019869	-	92	65.236	ENSCGRG00001012928	Rbm38	89	65.086	Cricetulus_griseus_chok1gshd
ENSTRUG00000019869	-	100	86.939	ENSCSEG00000004701	-	100	86.939	Cynoglossus_semilaevis
ENSTRUG00000019869	-	69	66.272	ENSCSEG00000020943	rbm38	62	63.684	Cynoglossus_semilaevis
ENSTRUG00000019869	-	99	59.036	ENSCVAG00000015952	rbm38	98	60.558	Cyprinodon_variegatus
ENSTRUG00000019869	-	100	85.306	ENSCVAG00000005472	-	100	85.306	Cyprinodon_variegatus
ENSTRUG00000019869	-	97	70.168	ENSDARG00000058818	rbm38	97	68.750	Danio_rerio
ENSTRUG00000019869	-	92	64.783	ENSDNOG00000032004	RBM38	98	63.755	Dasypus_novemcinctus
ENSTRUG00000019869	-	92	66.810	ENSECAG00000007700	RBM38	89	65.368	Equus_caballus
ENSTRUG00000019869	-	92	65.812	ENSEEUG00000013489	RBM38	89	66.379	Erinaceus_europaeus
ENSTRUG00000019869	-	100	80.800	ENSELUG00000005849	-	100	79.600	Esox_lucius
ENSTRUG00000019869	-	90	65.778	ENSELUG00000000585	-	98	65.333	Esox_lucius
ENSTRUG00000019869	-	92	67.672	ENSFCAG00000042916	RBM38	78	92.553	Felis_catus
ENSTRUG00000019869	-	71	76.271	ENSFALG00000010805	RBM38	92	73.184	Ficedula_albicollis
ENSTRUG00000019869	-	100	60.317	ENSFHEG00000017748	rbm38	98	59.761	Fundulus_heteroclitus
ENSTRUG00000019869	-	100	84.274	ENSFHEG00000006160	-	100	84.274	Fundulus_heteroclitus
ENSTRUG00000019869	-	75	87.027	ENSGMOG00000016655	-	99	84.865	Gadus_morhua
ENSTRUG00000019869	-	95	64.831	ENSGALG00000026081	RBM38	100	63.291	Gallus_gallus
ENSTRUG00000019869	-	94	80.519	ENSGACG00000009873	-	100	80.519	Gasterosteus_aculeatus
ENSTRUG00000019869	-	95	64.807	ENSGACG00000015224	rbm38	100	64.807	Gasterosteus_aculeatus
ENSTRUG00000019869	-	95	66.527	ENSGAGG00000001187	RBM38	100	64.706	Gopherus_agassizii
ENSTRUG00000019869	-	100	61.905	ENSHBUG00000012058	rbm38	98	62.302	Haplochromis_burtoni
ENSTRUG00000019869	-	100	88.163	ENSHBUG00000011778	-	100	88.163	Haplochromis_burtoni
ENSTRUG00000019869	-	92	64.655	ENSHGLG00000015077	RBM38	89	65.948	Heterocephalus_glaber_female
ENSTRUG00000019869	-	85	87.500	ENSHCOG00000005622	-	57	88.889	Hippocampus_comes
ENSTRUG00000019869	-	89	51.965	ENSHCOG00000019040	rbm38	80	54.726	Hippocampus_comes
ENSTRUG00000019869	-	100	70.565	ENSIPUG00000019349	-	100	70.565	Ictalurus_punctatus
ENSTRUG00000019869	-	92	58.650	ENSKMAG00000012402	rbm38	98	57.806	Kryptolebias_marmoratus
ENSTRUG00000019869	-	100	87.149	ENSLBEG00000016163	RBM38	100	87.149	Labrus_bergylta
ENSTRUG00000019869	-	100	63.492	ENSLBEG00000018878	rbm38	98	63.492	Labrus_bergylta
ENSTRUG00000019869	-	100	75.510	ENSLOCG00000003456	rbm38	100	75.510	Lepisosteus_oculatus
ENSTRUG00000019869	-	92	68.240	ENSMFAG00000043808	RBM38	78	93.617	Macaca_fascicularis
ENSTRUG00000019869	-	92	68.240	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSTRUG00000019869	-	92	68.240	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSTRUG00000019869	-	100	64.032	ENSMAMG00000024135	rbm38	98	62.451	Mastacembelus_armatus
ENSTRUG00000019869	-	100	88.571	ENSMAMG00000020499	RBM38	100	88.571	Mastacembelus_armatus
ENSTRUG00000019869	-	100	61.905	ENSMZEG00005026036	rbm38	98	62.302	Maylandia_zebra
ENSTRUG00000019869	-	100	88.163	ENSMZEG00005000849	-	100	88.163	Maylandia_zebra
ENSTRUG00000019869	-	92	66.953	ENSMAUG00000021211	Rbm38	89	66.379	Mesocricetus_auratus
ENSTRUG00000019869	-	92	68.240	ENSMICG00000038011	RBM38	98	67.241	Microcebus_murinus
ENSTRUG00000019869	-	92	67.382	ENSMOCG00000008715	Rbm38	94	63.934	Microtus_ochrogaster
ENSTRUG00000019869	-	100	91.837	ENSMMOG00000020051	-	100	91.837	Mola_mola
ENSTRUG00000019869	-	95	64.407	ENSMODG00000016458	RBM38	92	62.869	Monodelphis_domestica
ENSTRUG00000019869	-	69	71.176	ENSMALG00000022327	rbm38	71	71.084	Monopterus_albus
ENSTRUG00000019869	-	77	93.651	ENSMALG00000004680	RBM38	72	93.651	Monopterus_albus
ENSTRUG00000019869	-	92	64.655	MGP_CAROLIEiJ_G0024745	Rbm38	94	63.934	Mus_caroli
ENSTRUG00000019869	-	92	64.655	ENSMUSG00000027510	Rbm38	94	63.934	Mus_musculus
ENSTRUG00000019869	-	92	64.224	MGP_PahariEiJ_G0026186	Rbm38	94	63.934	Mus_pahari
ENSTRUG00000019869	-	92	64.655	MGP_SPRETEiJ_G0025665	Rbm38	94	63.934	Mus_spretus
ENSTRUG00000019869	-	72	75.824	ENSMPUG00000006518	RBM38	89	75.691	Mustela_putorius_furo
ENSTRUG00000019869	-	92	66.379	ENSMLUG00000011140	RBM38	98	64.502	Myotis_lucifugus
ENSTRUG00000019869	-	100	88.571	ENSNBRG00000022545	-	100	88.571	Neolamprologus_brichardi
ENSTRUG00000019869	-	100	62.302	ENSNBRG00000022685	rbm38	98	62.698	Neolamprologus_brichardi
ENSTRUG00000019869	-	92	67.382	ENSODEG00000007980	RBM38	89	66.379	Octodon_degus
ENSTRUG00000019869	-	99	62.151	ENSONIG00000017073	rbm38	100	62.550	Oreochromis_niloticus
ENSTRUG00000019869	-	99	88.525	ENSONIG00000020324	-	100	88.525	Oreochromis_niloticus
ENSTRUG00000019869	-	95	65.254	ENSOANG00000009259	RBM38	83	63.404	Ornithorhynchus_anatinus
ENSTRUG00000019869	-	100	59.127	ENSORLG00000012154	rbm38	98	59.127	Oryzias_latipes
ENSTRUG00000019869	-	100	83.740	ENSORLG00000027180	-	100	84.553	Oryzias_latipes
ENSTRUG00000019869	-	100	58.730	ENSORLG00020017871	rbm38	98	57.480	Oryzias_latipes_hni
ENSTRUG00000019869	-	100	83.740	ENSORLG00020020751	-	100	84.553	Oryzias_latipes_hni
ENSTRUG00000019869	-	100	85.306	ENSORLG00015017040	-	100	85.306	Oryzias_latipes_hsok
ENSTRUG00000019869	-	100	59.127	ENSORLG00015012606	rbm38	98	57.874	Oryzias_latipes_hsok
ENSTRUG00000019869	-	99	60.400	ENSOMEG00000006805	rbm38	96	60.246	Oryzias_melastigma
ENSTRUG00000019869	-	100	84.490	ENSOMEG00000023912	-	100	85.306	Oryzias_melastigma
ENSTRUG00000019869	-	92	68.670	ENSOGAG00000029136	RBM38	88	67.241	Otolemur_garnettii
ENSTRUG00000019869	-	92	67.672	ENSPPRG00000009507	RBM38	78	92.553	Panthera_pardus
ENSTRUG00000019869	-	74	75.401	ENSPTRG00000013661	RBM38	78	93.617	Pan_troglodytes
ENSTRUG00000019869	-	92	54.741	ENSPANG00000033127	-	91	53.247	Papio_anubis
ENSTRUG00000019869	-	92	68.240	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSTRUG00000019869	-	100	71.371	ENSPKIG00000018122	-	100	87.288	Paramormyrops_kingsleyae
ENSTRUG00000019869	-	100	70.120	ENSPKIG00000025417	rbm38	100	70.916	Paramormyrops_kingsleyae
ENSTRUG00000019869	-	96	65.021	ENSPSIG00000011649	RBM38	94	63.223	Pelodiscus_sinensis
ENSTRUG00000019869	-	100	81.855	ENSPMGG00000017094	-	100	81.855	Periophthalmus_magnuspinnatus
ENSTRUG00000019869	-	99	61.847	ENSPMGG00000011343	rbm38	98	61.847	Periophthalmus_magnuspinnatus
ENSTRUG00000019869	-	95	66.102	ENSPCIG00000013648	RBM38	92	62.605	Phascolarctos_cinereus
ENSTRUG00000019869	-	100	59.449	ENSPFOG00000011658	rbm38	98	59.449	Poecilia_formosa
ENSTRUG00000019869	-	100	85.020	ENSPLAG00000002500	-	100	82.520	Poecilia_latipinna
ENSTRUG00000019869	-	100	60.000	ENSPLAG00000005218	rbm38	98	59.449	Poecilia_latipinna
ENSTRUG00000019869	-	100	59.449	ENSPMEG00000015770	rbm38	98	59.449	Poecilia_mexicana
ENSTRUG00000019869	-	100	59.449	ENSPREG00000007398	rbm38	98	59.449	Poecilia_reticulata
ENSTRUG00000019869	-	92	66.953	ENSPCOG00000026201	RBM38	77	93.617	Propithecus_coquereli
ENSTRUG00000019869	-	70	85.484	ENSPVAG00000006457	RBM38	66	85.484	Pteropus_vampyrus
ENSTRUG00000019869	-	100	88.163	ENSPNYG00000019727	-	100	95.763	Pundamilia_nyererei
ENSTRUG00000019869	-	100	61.508	ENSPNYG00000021373	rbm38	98	61.905	Pundamilia_nyererei
ENSTRUG00000019869	-	100	75.510	ENSPNAG00000015123	-	96	84.848	Pygocentrus_nattereri
ENSTRUG00000019869	-	96	69.068	ENSPNAG00000010596	rbm38	97	68.333	Pygocentrus_nattereri
ENSTRUG00000019869	-	92	66.094	ENSRNOG00000006420	Rbm38	94	63.525	Rattus_norvegicus
ENSTRUG00000019869	-	95	55.508	ENSRROG00000036388	-	89	52.966	Rhinopithecus_roxellana
ENSTRUG00000019869	-	92	68.670	ENSSBOG00000031053	RBM38	88	93.617	Saimiri_boliviensis_boliviensis
ENSTRUG00000019869	-	100	68.952	ENSSFOG00015004453	rbm38	100	70.565	Scleropages_formosus
ENSTRUG00000019869	-	100	88.980	ENSSDUG00000021082	RBM38	100	88.980	Seriola_dumerili
ENSTRUG00000019869	-	100	64.567	ENSSDUG00000022611	rbm38	98	64.173	Seriola_dumerili
ENSTRUG00000019869	-	100	89.796	ENSSLDG00000011778	RBM38	100	89.796	Seriola_lalandi_dorsalis
ENSTRUG00000019869	-	100	64.567	ENSSLDG00000010845	rbm38	98	64.173	Seriola_lalandi_dorsalis
ENSTRUG00000019869	-	100	63.889	ENSSPAG00000011113	rbm38	98	62.992	Stegastes_partitus
ENSTRUG00000019869	-	100	89.388	ENSSPAG00000020989	RBM38	100	89.388	Stegastes_partitus
ENSTRUG00000019869	-	92	66.810	ENSSSCG00000007504	RBM38	89	65.368	Sus_scrofa
ENSTRUG00000019869	-	95	90.558	ENSTNIG00000007093	-	100	90.558	Tetraodon_nigroviridis
ENSTRUG00000019869	-	92	67.382	ENSUAMG00000019780	RBM38	89	65.948	Ursus_americanus
ENSTRUG00000019869	-	92	66.379	ENSVVUG00000017246	RBM38	89	64.935	Vulpes_vulpes
ENSTRUG00000019869	-	95	63.136	ENSXETG00000011268	rbm38	99	61.411	Xenopus_tropicalis
ENSTRUG00000019869	-	71	77.654	ENSXCOG00000017324	-	68	84.076	Xiphophorus_couchianus
ENSTRUG00000019869	-	100	60.956	ENSXMAG00000023662	rbm38	98	60.956	Xiphophorus_maculatus