EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000019870 (Gene tree)
Gene ID: 101068594
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4058 bases
Position: chr5:9565586-9569643
Accession: 101068594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048461	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057288	-	2751	XM_003964784	ENSTRUP00000048461	180 (aa)	XP_003964833	H2UI79

Gene Model

Click here to download ENSTRUG00000019870's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000019870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000019870	-	90	46.471	ENSTRUG00000024375	-	84	46.471
ENSTRUG00000019870	-	98	59.322	ENSTRUG00000006254	arl1	98	59.322
ENSTRUG00000019870	-	78	67.857	ENSTRUG00000024749	-	100	67.857
ENSTRUG00000019870	-	93	30.939	ENSTRUG00000007269	sar1ab	90	30.939
ENSTRUG00000019870	-	98	30.108	ENSTRUG00000013035	-	58	33.784
ENSTRUG00000019870	-	93	46.707	ENSTRUG00000004035	arl3l2	89	46.707
ENSTRUG00000019870	-	79	70.423	ENSTRUG00000020509	-	74	70.423
ENSTRUG00000019870	-	95	32.558	ENSTRUG00000011496	arl8bb	92	32.558
ENSTRUG00000019870	-	92	32.530	ENSTRUG00000013912	arl8a	89	32.530
ENSTRUG00000019870	-	96	48.555	ENSTRUG00000005435	arl2	93	48.555
ENSTRUG00000019870	-	100	92.818	ENSTRUG00000011190	arf3	100	92.818
ENSTRUG00000019870	-	100	92.818	ENSTRUG00000007465	arf3	100	92.818
ENSTRUG00000019870	-	97	48.276	ENSTRUG00000014614	arl5a	97	48.276
ENSTRUG00000019870	-	97	93.143	ENSTRUG00000014380	-	97	93.143
ENSTRUG00000019870	-	73	30.822	ENSTRUG00000024994	RAB1A	69	30.822
ENSTRUG00000019870	-	94	30.220	ENSTRUG00000023908	sar1b	91	30.220
ENSTRUG00000019870	-	100	42.391	ENSTRUG00000017239	ARL6	99	42.391
ENSTRUG00000019870	-	97	82.759	ENSTRUG00000025462	-	97	82.759
ENSTRUG00000019870	-	89	44.720	ENSTRUG00000011561	arl11	93	44.720
ENSTRUG00000019870	-	88	46.626	ENSTRUG00000003716	-	70	46.626
ENSTRUG00000019870	-	73	30.822	ENSTRUG00000023164	rab1ab	69	30.822
ENSTRUG00000019870	-	95	31.977	ENSTRUG00000023169	arl8ba	92	31.977
ENSTRUG00000019870	-	96	46.369	ENSTRUG00000003183	-	91	46.369
ENSTRUG00000019870	-	90	45.833	ENSTRUG00000008027	arl4aa	85	45.833
ENSTRUG00000019870	-	96	42.529	ENSTRUG00000018668	-	87	42.529
ENSTRUG00000019870	-	88	30.539	ENSTRUG00000003641	arl13b	63	30.539
ENSTRUG00000019870	-	98	47.159	ENSTRUG00000022814	arl5c	98	47.159
ENSTRUG00000019870	-	78	66.667	ENSTRUG00000025171	-	87	66.667
ENSTRUG00000019870	-	73	30.137	ENSTRUG00000004287	rab1ba	70	30.137
ENSTRUG00000019870	-	100	93.923	ENSTRUG00000023041	-	100	93.923
ENSTRUG00000019870	-	94	34.615	ENSTRUG00000009319	arfrp1	89	34.615
ENSTRUG00000019870	-	96	49.419	ENSTRUG00000020453	arl8	96	49.419
ENSTRUG00000019870	-	92	48.193	ENSTRUG00000018107	arl3	91	48.193
ENSTRUG00000019870	-	96	47.753	ENSTRUG00000003085	arl4cb	91	47.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000019870	-	100	95.000	ENSACIG00000012192	-	100	95.000	Amphilophus_citrinellus
ENSTRUG00000019870	-	84	94.702	ENSAOCG00000001275	-	88	94.702	Amphiprion_ocellaris
ENSTRUG00000019870	-	100	94.444	ENSAPEG00000016909	-	100	94.444	Amphiprion_percula
ENSTRUG00000019870	-	100	96.111	ENSATEG00000003174	-	100	96.111	Anabas_testudineus
ENSTRUG00000019870	-	100	93.889	ENSACLG00000004123	-	100	93.889	Astatotilapia_calliptera
ENSTRUG00000019870	-	100	95.028	ENSAMXG00000019845	arf1	100	95.028	Astyanax_mexicanus
ENSTRUG00000019870	-	100	95.000	ENSCVAG00000013374	-	100	95.000	Cyprinodon_variegatus
ENSTRUG00000019870	-	100	95.028	ENSDARG00000009484	arf1	100	95.028	Danio_rerio
ENSTRUG00000019870	-	100	95.580	ENSELUG00000022533	arf1	79	95.580	Esox_lucius
ENSTRUG00000019870	-	100	94.444	ENSFHEG00000005859	-	100	94.444	Fundulus_heteroclitus
ENSTRUG00000019870	-	96	89.017	ENSGMOG00000000429	arf1	95	89.017	Gadus_morhua
ENSTRUG00000019870	-	100	95.000	ENSGAFG00000018151	-	100	95.000	Gambusia_affinis
ENSTRUG00000019870	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSTRUG00000019870	-	100	93.889	ENSHBUG00000002636	-	100	93.889	Haplochromis_burtoni
ENSTRUG00000019870	-	100	94.475	ENSIPUG00000006311	arf1	100	94.475	Ictalurus_punctatus
ENSTRUG00000019870	-	100	94.444	ENSKMAG00000018315	-	100	94.444	Kryptolebias_marmoratus
ENSTRUG00000019870	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSTRUG00000019870	-	99	88.827	ENSLBEG00000001998	arf1	99	88.827	Labrus_bergylta
ENSTRUG00000019870	-	100	95.556	ENSMAMG00000001553	-	100	95.556	Mastacembelus_armatus
ENSTRUG00000019870	-	100	93.889	ENSMZEG00005022594	-	100	93.889	Maylandia_zebra
ENSTRUG00000019870	-	100	96.667	ENSMALG00000004269	-	100	96.667	Monopterus_albus
ENSTRUG00000019870	-	100	93.889	ENSNBRG00000016455	-	100	93.889	Neolamprologus_brichardi
ENSTRUG00000019870	-	100	93.889	ENSONIG00000001286	-	100	93.889	Oreochromis_niloticus
ENSTRUG00000019870	-	100	96.111	ENSORLG00000023270	-	100	96.111	Oryzias_latipes
ENSTRUG00000019870	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSTRUG00000019870	-	100	96.111	ENSORLG00015019836	-	100	96.111	Oryzias_latipes_hsok
ENSTRUG00000019870	-	100	96.111	ENSOMEG00000023784	-	100	96.111	Oryzias_melastigma
ENSTRUG00000019870	-	100	88.950	ENSPMGG00000014174	arf1	100	88.950	Periophthalmus_magnuspinnatus
ENSTRUG00000019870	-	100	93.333	ENSPMAG00000002035	arf1	100	93.333	Petromyzon_marinus
ENSTRUG00000019870	-	100	95.000	ENSPFOG00000014787	-	100	95.000	Poecilia_formosa
ENSTRUG00000019870	-	100	95.000	ENSPLAG00000001041	-	100	95.000	Poecilia_latipinna
ENSTRUG00000019870	-	100	95.000	ENSPMEG00000024077	-	100	95.000	Poecilia_mexicana
ENSTRUG00000019870	-	100	95.000	ENSPREG00000009009	-	100	95.000	Poecilia_reticulata
ENSTRUG00000019870	-	100	93.889	ENSPNYG00000009472	-	100	93.889	Pundamilia_nyererei
ENSTRUG00000019870	-	94	97.041	ENSPNAG00000000098	arf1	93	97.041	Pygocentrus_nattereri
ENSTRUG00000019870	-	99	79.330	YDL192W	-	99	79.330	Saccharomyces_cerevisiae
ENSTRUG00000019870	-	99	78.212	YDL137W	-	99	78.212	Saccharomyces_cerevisiae
ENSTRUG00000019870	-	100	89.444	ENSSMAG00000006125	-	100	89.444	Scophthalmus_maximus
ENSTRUG00000019870	-	100	95.000	ENSSDUG00000017356	-	100	95.000	Seriola_dumerili
ENSTRUG00000019870	-	100	95.000	ENSSLDG00000008504	-	100	95.000	Seriola_lalandi_dorsalis
ENSTRUG00000019870	-	100	96.111	ENSSPAG00000011431	-	100	96.111	Stegastes_partitus
ENSTRUG00000019870	-	100	97.778	ENSTNIG00000011685	-	100	97.778	Tetraodon_nigroviridis
ENSTRUG00000019870	-	100	95.000	ENSXCOG00000016687	-	98	95.000	Xiphophorus_couchianus
ENSTRUG00000019870	-	100	95.000	ENSXMAG00000009193	-	100	95.000	Xiphophorus_maculatus