EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000020069 (Gene tree)
Gene ID: 101072936
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 10203 bases
Position: chr14:6305508-6315710
Accession: 101072936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052315	zf-RNPHF	PF08080.12	6.5e-07	1	1
ENSTRUP00000055797	zf-RNPHF	PF08080.12	6.5e-07	1	1
ENSTRUP00000052315	RRM_1	PF00076.22	1e-32	1	3
ENSTRUP00000052315	RRM_1	PF00076.22	1e-32	2	3
ENSTRUP00000052315	RRM_1	PF00076.22	1e-32	3	3
ENSTRUP00000055797	RRM_1	PF00076.22	1e-32	1	3
ENSTRUP00000055797	RRM_1	PF00076.22	1e-32	2	3
ENSTRUP00000055797	RRM_1	PF00076.22	1e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052308	-	6187	XM_011610749	ENSTRUP00000055797	403 (aa)	XP_011609051	UPI0005D140FD
ENSTRUT00000049422	-	6138	XM_011610748	ENSTRUP00000052315	403 (aa)	XP_011609050	UPI0005D140FD

Gene Model

Click here to download ENSTRUG00000020069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000020069	hnrnph1	85	43.827	ENSTRUG00000015354	grsf1	75	43.344
ENSTRUG00000020069	hnrnph1	86	31.436	ENSTRUG00000007941	esrp2	53	30.623
ENSTRUG00000020069	hnrnph1	82	56.771	ENSTRUG00000023443	hnrnph3	83	57.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020069	hnrnph1	100	95.823	ENSAPOG00000016614	hnrnph1	100	95.823	Acanthochromis_polyacanthus
ENSTRUG00000020069	hnrnph1	99	95.213	ENSACIG00000008964	hnrnph1	98	94.947	Amphilophus_citrinellus
ENSTRUG00000020069	hnrnph1	100	96.314	ENSAOCG00000008372	hnrnph1	100	96.314	Amphiprion_ocellaris
ENSTRUG00000020069	hnrnph1	100	96.069	ENSAPEG00000012980	hnrnph1	100	96.069	Amphiprion_percula
ENSTRUG00000020069	hnrnph1	100	96.069	ENSATEG00000002792	hnrnph1	100	96.069	Anabas_testudineus
ENSTRUG00000020069	hnrnph1	99	69.469	ENSACAG00000016323	-	91	73.861	Anolis_carolinensis
ENSTRUG00000020069	hnrnph1	92	91.292	ENSACLG00000003313	hnrnph1	96	90.169	Astatotilapia_calliptera
ENSTRUG00000020069	hnrnph1	99	81.572	ENSAMXG00000030703	hnrnph1l	84	80.590	Astyanax_mexicanus
ENSTRUG00000020069	hnrnph1	100	84.841	ENSAMXG00000002483	hnrnph1	99	89.096	Astyanax_mexicanus
ENSTRUG00000020069	hnrnph1	100	94.866	ENSCSEG00000015891	hnrnph1	100	94.866	Cynoglossus_semilaevis
ENSTRUG00000020069	hnrnph1	100	94.581	ENSCVAG00000014097	hnrnph1	100	94.089	Cyprinodon_variegatus
ENSTRUG00000020069	hnrnph1	95	87.661	ENSDARG00000005551	hnrnph1l	99	84.236	Danio_rerio
ENSTRUG00000020069	hnrnph1	93	88.594	ENSDARG00000040881	hnrnph1	94	88.594	Danio_rerio
ENSTRUG00000020069	hnrnph1	100	86.019	ENSELUG00000006715	hnrnph1	100	82.464	Esox_lucius
ENSTRUG00000020069	hnrnph1	93	84.127	ENSELUG00000021437	-	99	86.772	Esox_lucius
ENSTRUG00000020069	hnrnph1	100	92.365	ENSFHEG00000008474	hnrnph1	100	90.640	Fundulus_heteroclitus
ENSTRUG00000020069	hnrnph1	96	87.786	ENSGMOG00000006782	hnrnph1	97	86.514	Gadus_morhua
ENSTRUG00000020069	hnrnph1	100	95.813	ENSGAFG00000006280	hnrnph1	100	95.813	Gambusia_affinis
ENSTRUG00000020069	hnrnph1	100	91.584	ENSGACG00000018352	hnrnph1	99	90.099	Gasterosteus_aculeatus
ENSTRUG00000020069	hnrnph1	92	91.292	ENSHBUG00000010547	hnrnph1	96	90.169	Haplochromis_burtoni
ENSTRUG00000020069	hnrnph1	100	82.270	ENSHCOG00000004513	hnrnph1	100	86.461	Hippocampus_comes
ENSTRUG00000020069	hnrnph1	95	83.033	ENSIPUG00000024047	hnrnph1l	96	80.835	Ictalurus_punctatus
ENSTRUG00000020069	hnrnph1	100	84.108	ENSIPUG00000018262	hnrnph1	100	85.575	Ictalurus_punctatus
ENSTRUG00000020069	hnrnph1	100	94.132	ENSKMAG00000018802	hnrnph1	100	93.888	Kryptolebias_marmoratus
ENSTRUG00000020069	hnrnph1	100	95.332	ENSLBEG00000027811	hnrnph1	100	95.332	Labrus_bergylta
ENSTRUG00000020069	hnrnph1	94	80.893	ENSLOCG00000012510	hnrnph1	91	79.901	Lepisosteus_oculatus
ENSTRUG00000020069	hnrnph1	99	54.186	ENSMMUG00000017392	-	83	55.041	Macaca_mulatta
ENSTRUG00000020069	hnrnph1	99	53.917	ENSMNEG00000030544	-	83	55.041	Macaca_nemestrina
ENSTRUG00000020069	hnrnph1	93	88.978	ENSMAMG00000011478	hnrnph1	99	88.978	Mastacembelus_armatus
ENSTRUG00000020069	hnrnph1	100	95.813	ENSMZEG00005009791	hnrnph1	100	95.813	Maylandia_zebra
ENSTRUG00000020069	hnrnph1	93	93.684	ENSMMOG00000009064	hnrnph1	98	93.158	Mola_mola
ENSTRUG00000020069	hnrnph1	74	51.642	ENSMODG00000002200	-	99	50.599	Monodelphis_domestica
ENSTRUG00000020069	hnrnph1	93	91.667	ENSMALG00000003999	hnrnph1	99	90.000	Monopterus_albus
ENSTRUG00000020069	hnrnph1	92	91.292	ENSNBRG00000015406	hnrnph1	96	90.169	Neolamprologus_brichardi
ENSTRUG00000020069	hnrnph1	100	95.813	ENSONIG00000017754	hnrnph1	100	95.813	Oreochromis_niloticus
ENSTRUG00000020069	hnrnph1	100	93.220	ENSORLG00000006932	hnrnph1	100	93.705	Oryzias_latipes
ENSTRUG00000020069	hnrnph1	100	93.220	ENSORLG00020007881	hnrnph1	100	93.462	Oryzias_latipes_hni
ENSTRUG00000020069	hnrnph1	100	93.220	ENSORLG00015005306	hnrnph1	100	93.705	Oryzias_latipes_hsok
ENSTRUG00000020069	hnrnph1	100	96.324	ENSOMEG00000009827	hnrnph1	100	96.324	Oryzias_melastigma
ENSTRUG00000020069	hnrnph1	93	81.592	ENSPKIG00000009532	-	93	80.348	Paramormyrops_kingsleyae
ENSTRUG00000020069	hnrnph1	100	87.286	ENSPKIG00000018203	hnrnph1l	100	83.824	Paramormyrops_kingsleyae
ENSTRUG00000020069	hnrnph1	100	91.400	ENSPMGG00000012151	hnrnph1	100	91.892	Periophthalmus_magnuspinnatus
ENSTRUG00000020069	hnrnph1	100	95.813	ENSPFOG00000004097	hnrnph1	100	95.813	Poecilia_formosa
ENSTRUG00000020069	hnrnph1	100	95.813	ENSPLAG00000011771	hnrnph1	100	95.813	Poecilia_latipinna
ENSTRUG00000020069	hnrnph1	100	96.059	ENSPMEG00000019446	hnrnph1	100	96.059	Poecilia_mexicana
ENSTRUG00000020069	hnrnph1	100	95.813	ENSPREG00000005780	hnrnph1	100	95.813	Poecilia_reticulata
ENSTRUG00000020069	hnrnph1	100	95.813	ENSPNYG00000000204	hnrnph1	100	95.813	Pundamilia_nyererei
ENSTRUG00000020069	hnrnph1	100	84.841	ENSPNAG00000000439	hnrnph1	100	86.064	Pygocentrus_nattereri
ENSTRUG00000020069	hnrnph1	99	84.108	ENSPNAG00000002784	hnrnph1l	99	82.555	Pygocentrus_nattereri
ENSTRUG00000020069	hnrnph1	95	87.692	ENSSFOG00015016055	-	94	87.664	Scleropages_formosus
ENSTRUG00000020069	hnrnph1	97	88.889	ENSSFOG00015022796	hnrnph1l	100	85.645	Scleropages_formosus
ENSTRUG00000020069	hnrnph1	96	89.673	ENSSMAG00000007820	hnrnph1	96	92.126	Scophthalmus_maximus
ENSTRUG00000020069	hnrnph1	100	96.314	ENSSDUG00000008785	hnrnph1	100	96.314	Seriola_dumerili
ENSTRUG00000020069	hnrnph1	100	96.314	ENSSLDG00000010685	hnrnph1	100	96.314	Seriola_lalandi_dorsalis
ENSTRUG00000020069	hnrnph1	100	95.577	ENSSPAG00000009921	hnrnph1	100	95.577	Stegastes_partitus
ENSTRUG00000020069	hnrnph1	99	70.362	ENSXETG00000018321	hnrnph1	85	76.344	Xenopus_tropicalis
ENSTRUG00000020069	hnrnph1	93	91.560	ENSXCOG00000009133	hnrnph1	97	90.026	Xiphophorus_couchianus
ENSTRUG00000020069	hnrnph1	94	95.213	ENSXMAG00000021332	hnrnph1	99	94.947	Xiphophorus_maculatus