EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000020077 (Gene tree)
Gene ID: 101063461
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3899 bases
Position: chr18:5228131-5232029
Accession: 101063461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052123	zf-C3HC	PF07967.13	7.5e-34	1	1
ENSTRUP00000052123	Rsm1	PF08600.10	6.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055168	-	2450	XM_003972874	ENSTRUP00000052123	489 (aa)	XP_003972923	UPI00029907AC

Gene Model

Click here to download ENSTRUG00000020077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020077	zc3hc1	94	42.562	ENSG00000091732	ZC3HC1	92	48.243	Homo_sapiens
ENSTRUG00000020077	zc3hc1	100	68.600	ENSAPOG00000009078	zc3hc1	100	68.600	Acanthochromis_polyacanthus
ENSTRUG00000020077	zc3hc1	95	41.498	ENSAMEG00000005425	ZC3HC1	94	42.363	Ailuropoda_melanoleuca
ENSTRUG00000020077	zc3hc1	99	65.400	ENSACIG00000019513	zc3hc1	99	65.400	Amphilophus_citrinellus
ENSTRUG00000020077	zc3hc1	100	68.200	ENSAOCG00000024310	zc3hc1	100	68.200	Amphiprion_ocellaris
ENSTRUG00000020077	zc3hc1	100	67.800	ENSAPEG00000004907	zc3hc1	100	67.800	Amphiprion_percula
ENSTRUG00000020077	zc3hc1	86	70.833	ENSATEG00000016898	zc3hc1	89	70.833	Anabas_testudineus
ENSTRUG00000020077	zc3hc1	86	42.890	ENSAPLG00000003832	ZC3HC1	96	42.890	Anas_platyrhynchos
ENSTRUG00000020077	zc3hc1	95	42.828	ENSACAG00000001638	ZC3HC1	95	42.828	Anolis_carolinensis
ENSTRUG00000020077	zc3hc1	95	40.779	ENSANAG00000022213	ZC3HC1	93	47.284	Aotus_nancymaae
ENSTRUG00000020077	zc3hc1	91	68.502	ENSACLG00000025033	zc3hc1	99	68.502	Astatotilapia_calliptera
ENSTRUG00000020077	zc3hc1	94	49.567	ENSAMXG00000036792	zc3hc1	96	49.567	Astyanax_mexicanus
ENSTRUG00000020077	zc3hc1	95	43.033	ENSBTAG00000011247	ZC3HC1	94	43.685	Bos_taurus
ENSTRUG00000020077	zc3hc1	95	42.916	ENSCJAG00000010536	ZC3HC1	93	49.840	Callithrix_jacchus
ENSTRUG00000020077	zc3hc1	95	42.276	ENSCAFG00000031850	-	95	42.480	Canis_familiaris
ENSTRUG00000020077	zc3hc1	95	42.020	ENSCAFG00000001499	-	93	42.222	Canis_familiaris
ENSTRUG00000020077	zc3hc1	95	41.700	ENSCAFG00000029401	-	92	41.922	Canis_familiaris
ENSTRUG00000020077	zc3hc1	95	41.870	ENSCAFG00000028735	-	95	42.073	Canis_familiaris
ENSTRUG00000020077	zc3hc1	95	42.073	ENSCAFG00020006829	-	95	42.276	Canis_lupus_dingo
ENSTRUG00000020077	zc3hc1	95	41.498	ENSCAFG00020023333	-	91	46.855	Canis_lupus_dingo
ENSTRUG00000020077	zc3hc1	95	38.289	ENSCHIG00000014103	ZC3HC1	93	39.463	Capra_hircus
ENSTRUG00000020077	zc3hc1	94	40.417	ENSTSYG00000002843	ZC3HC1	89	46.302	Carlito_syrichta
ENSTRUG00000020077	zc3hc1	88	36.458	ENSCAPG00000016300	ZC3HC1	95	36.458	Cavia_aperea
ENSTRUG00000020077	zc3hc1	95	42.116	ENSCPOG00000014034	ZC3HC1	94	44.932	Cavia_porcellus
ENSTRUG00000020077	zc3hc1	94	31.524	ENSCCAG00000020384	ZC3HC1	98	36.441	Cebus_capucinus
ENSTRUG00000020077	zc3hc1	95	42.536	ENSCATG00000023130	ZC3HC1	93	48.243	Cercocebus_atys
ENSTRUG00000020077	zc3hc1	83	34.053	ENSCLAG00000008260	ZC3HC1	88	34.293	Chinchilla_lanigera
ENSTRUG00000020077	zc3hc1	73	39.211	ENSCSAG00000009881	ZC3HC1	97	40.000	Chlorocebus_sabaeus
ENSTRUG00000020077	zc3hc1	89	44.850	ENSCHOG00000011846	ZC3HC1	99	44.850	Choloepus_hoffmanni
ENSTRUG00000020077	zc3hc1	95	44.191	ENSCPBG00000017519	ZC3HC1	95	44.191	Chrysemys_picta_bellii
ENSTRUG00000020077	zc3hc1	95	42.710	ENSCANG00000029091	ZC3HC1	93	48.553	Colobus_angolensis_palliatus
ENSTRUG00000020077	zc3hc1	95	42.387	ENSCGRG00001018805	Zc3hc1	93	46.417	Cricetulus_griseus_chok1gshd
ENSTRUG00000020077	zc3hc1	95	41.770	ENSCGRG00000017114	Zc3hc1	95	41.770	Cricetulus_griseus_crigri
ENSTRUG00000020077	zc3hc1	99	63.872	ENSCSEG00000009284	zc3hc1	98	63.872	Cynoglossus_semilaevis
ENSTRUG00000020077	zc3hc1	100	63.581	ENSCVAG00000011566	zc3hc1	99	63.581	Cyprinodon_variegatus
ENSTRUG00000020077	zc3hc1	100	56.137	ENSDARG00000062651	zc3hc1	100	56.137	Danio_rerio
ENSTRUG00000020077	zc3hc1	95	42.394	ENSDNOG00000045016	ZC3HC1	95	42.394	Dasypus_novemcinctus
ENSTRUG00000020077	zc3hc1	86	44.545	ENSDORG00000008697	Zc3hc1	87	52.778	Dipodomys_ordii
ENSTRUG00000020077	zc3hc1	88	43.946	ENSEASG00005008789	ZC3HC1	93	44.843	Equus_asinus_asinus
ENSTRUG00000020077	zc3hc1	95	43.149	ENSECAG00000017886	ZC3HC1	95	43.763	Equus_caballus
ENSTRUG00000020077	zc3hc1	65	48.521	ENSEEUG00000003123	ZC3HC1	65	48.521	Erinaceus_europaeus
ENSTRUG00000020077	zc3hc1	99	53.772	ENSELUG00000023168	zc3hc1	100	55.750	Esox_lucius
ENSTRUG00000020077	zc3hc1	95	41.870	ENSFCAG00000010429	ZC3HC1	93	48.113	Felis_catus
ENSTRUG00000020077	zc3hc1	87	42.013	ENSFALG00000005006	ZC3HC1	95	42.105	Ficedula_albicollis
ENSTRUG00000020077	zc3hc1	95	42.683	ENSFDAG00000019897	ZC3HC1	91	48.896	Fukomys_damarensis
ENSTRUG00000020077	zc3hc1	97	64.256	ENSFHEG00000020149	zc3hc1	100	63.527	Fundulus_heteroclitus
ENSTRUG00000020077	zc3hc1	99	58.116	ENSGMOG00000002914	zc3hc1	99	58.586	Gadus_morhua
ENSTRUG00000020077	zc3hc1	94	41.458	ENSGALG00000008003	ZC3HC1	95	41.458	Gallus_gallus
ENSTRUG00000020077	zc3hc1	100	65.400	ENSGAFG00000016095	zc3hc1	100	65.400	Gambusia_affinis
ENSTRUG00000020077	zc3hc1	99	65.996	ENSGACG00000019706	zc3hc1	99	65.996	Gasterosteus_aculeatus
ENSTRUG00000020077	zc3hc1	78	44.949	ENSGAGG00000016106	ZC3HC1	100	44.949	Gopherus_agassizii
ENSTRUG00000020077	zc3hc1	94	42.769	ENSGGOG00000015504	ZC3HC1	92	48.562	Gorilla_gorilla
ENSTRUG00000020077	zc3hc1	99	67.404	ENSHBUG00000008347	zc3hc1	99	67.404	Haplochromis_burtoni
ENSTRUG00000020077	zc3hc1	95	43.238	ENSHGLG00000005085	ZC3HC1	91	50.321	Heterocephalus_glaber_female
ENSTRUG00000020077	zc3hc1	94	43.361	ENSHGLG00100011395	ZC3HC1	89	50.321	Heterocephalus_glaber_male
ENSTRUG00000020077	zc3hc1	100	60.041	ENSHCOG00000014309	zc3hc1	100	61.055	Hippocampus_comes
ENSTRUG00000020077	zc3hc1	95	41.393	ENSSTOG00000023599	-	94	42.029	Ictidomys_tridecemlineatus
ENSTRUG00000020077	zc3hc1	99	65.261	ENSKMAG00000015315	zc3hc1	92	65.261	Kryptolebias_marmoratus
ENSTRUG00000020077	zc3hc1	99	65.800	ENSLBEG00000017325	zc3hc1	99	65.800	Labrus_bergylta
ENSTRUG00000020077	zc3hc1	75	44.529	ENSLACG00000013032	ZC3HC1	92	44.529	Latimeria_chalumnae
ENSTRUG00000020077	zc3hc1	99	52.063	ENSLOCG00000015963	zc3hc1	99	52.063	Lepisosteus_oculatus
ENSTRUG00000020077	zc3hc1	99	41.040	ENSLAFG00000001292	ZC3HC1	95	42.540	Loxodonta_africana
ENSTRUG00000020077	zc3hc1	95	42.536	ENSMFAG00000030176	ZC3HC1	93	48.243	Macaca_fascicularis
ENSTRUG00000020077	zc3hc1	95	41.837	ENSMMUG00000006155	ZC3HC1	93	48.243	Macaca_mulatta
ENSTRUG00000020077	zc3hc1	95	42.536	ENSMNEG00000011833	ZC3HC1	93	48.243	Macaca_nemestrina
ENSTRUG00000020077	zc3hc1	95	42.536	ENSMLEG00000027328	ZC3HC1	93	48.243	Mandrillus_leucophaeus
ENSTRUG00000020077	zc3hc1	99	69.076	ENSMAMG00000010691	zc3hc1	99	69.076	Mastacembelus_armatus
ENSTRUG00000020077	zc3hc1	99	67.203	ENSMZEG00005007142	zc3hc1	99	67.203	Maylandia_zebra
ENSTRUG00000020077	zc3hc1	94	40.202	ENSMGAG00000002977	ZC3HC1	95	41.633	Meleagris_gallopavo
ENSTRUG00000020077	zc3hc1	84	40.326	ENSMAUG00000017032	Zc3hc1	93	40.559	Mesocricetus_auratus
ENSTRUG00000020077	zc3hc1	95	42.181	ENSMICG00000009167	ZC3HC1	93	47.436	Microcebus_murinus
ENSTRUG00000020077	zc3hc1	94	42.827	ENSMOCG00000015239	Zc3hc1	95	43.004	Microtus_ochrogaster
ENSTRUG00000020077	zc3hc1	88	69.932	ENSMMOG00000002204	zc3hc1	99	69.932	Mola_mola
ENSTRUG00000020077	zc3hc1	96	34.122	ENSMODG00000014630	ZC3HC1	95	34.706	Monodelphis_domestica
ENSTRUG00000020077	zc3hc1	98	67.347	ENSMALG00000014447	zc3hc1	99	67.807	Monopterus_albus
ENSTRUG00000020077	zc3hc1	95	42.653	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	47.910	Mus_caroli
ENSTRUG00000020077	zc3hc1	95	42.363	ENSMUSG00000039130	Zc3hc1	95	42.566	Mus_musculus
ENSTRUG00000020077	zc3hc1	95	38.900	MGP_PahariEiJ_G0021941	Zc3hc1	94	38.900	Mus_pahari
ENSTRUG00000020077	zc3hc1	95	42.363	MGP_SPRETEiJ_G0029183	Zc3hc1	95	42.566	Mus_spretus
ENSTRUG00000020077	zc3hc1	89	42.117	ENSMPUG00000005297	ZC3HC1	88	42.581	Mustela_putorius_furo
ENSTRUG00000020077	zc3hc1	67	36.103	ENSMLUG00000029228	-	98	36.103	Myotis_lucifugus
ENSTRUG00000020077	zc3hc1	95	42.008	ENSMLUG00000000063	-	94	42.029	Myotis_lucifugus
ENSTRUG00000020077	zc3hc1	95	43.381	ENSNGAG00000019014	Zc3hc1	94	49.051	Nannospalax_galili
ENSTRUG00000020077	zc3hc1	99	67.339	ENSNBRG00000004577	zc3hc1	99	67.339	Neolamprologus_brichardi
ENSTRUG00000020077	zc3hc1	94	42.975	ENSNLEG00000012698	ZC3HC1	92	48.882	Nomascus_leucogenys
ENSTRUG00000020077	zc3hc1	95	44.215	ENSMEUG00000011023	ZC3HC1	95	44.215	Notamacropus_eugenii
ENSTRUG00000020077	zc3hc1	95	41.237	ENSODEG00000014604	ZC3HC1	94	43.396	Octodon_degus
ENSTRUG00000020077	zc3hc1	99	68.008	ENSONIG00000011644	zc3hc1	99	68.008	Oreochromis_niloticus
ENSTRUG00000020077	zc3hc1	89	40.899	ENSOANG00000011460	ZC3HC1	97	40.899	Ornithorhynchus_anatinus
ENSTRUG00000020077	zc3hc1	95	42.424	ENSOCUG00000017137	ZC3HC1	95	43.030	Oryctolagus_cuniculus
ENSTRUG00000020077	zc3hc1	99	65.306	ENSORLG00000014409	zc3hc1	98	65.587	Oryzias_latipes
ENSTRUG00000020077	zc3hc1	99	65.714	ENSORLG00020015874	zc3hc1	98	65.992	Oryzias_latipes_hni
ENSTRUG00000020077	zc3hc1	99	65.102	ENSORLG00015014641	zc3hc1	98	65.385	Oryzias_latipes_hsok
ENSTRUG00000020077	zc3hc1	99	66.122	ENSOMEG00000020604	zc3hc1	99	66.397	Oryzias_melastigma
ENSTRUG00000020077	zc3hc1	99	66.327	ENSOMEG00000000215	zc3hc1	99	66.599	Oryzias_melastigma
ENSTRUG00000020077	zc3hc1	95	36.939	ENSOGAG00000026193	ZC3HC1	95	37.551	Otolemur_garnettii
ENSTRUG00000020077	zc3hc1	95	41.988	ENSOARG00000004907	ZC3HC1	92	42.623	Ovis_aries
ENSTRUG00000020077	zc3hc1	94	42.562	ENSPPAG00000043172	ZC3HC1	92	48.243	Pan_paniscus
ENSTRUG00000020077	zc3hc1	94	41.684	ENSPPRG00000001004	ZC3HC1	92	47.799	Panthera_pardus
ENSTRUG00000020077	zc3hc1	95	41.870	ENSPTIG00000007823	ZC3HC1	93	48.113	Panthera_tigris_altaica
ENSTRUG00000020077	zc3hc1	94	42.769	ENSPTRG00000019685	ZC3HC1	92	48.562	Pan_troglodytes
ENSTRUG00000020077	zc3hc1	95	42.041	ENSPANG00000014229	ZC3HC1	93	48.562	Papio_anubis
ENSTRUG00000020077	zc3hc1	99	49.801	ENSPKIG00000007172	zc3hc1	99	49.801	Paramormyrops_kingsleyae
ENSTRUG00000020077	zc3hc1	87	40.899	ENSPSIG00000016646	ZC3HC1	87	43.498	Pelodiscus_sinensis
ENSTRUG00000020077	zc3hc1	96	59.459	ENSPMGG00000003548	zc3hc1	95	59.751	Periophthalmus_magnuspinnatus
ENSTRUG00000020077	zc3hc1	95	41.152	ENSPEMG00000000514	Zc3hc1	95	42.418	Peromyscus_maniculatus_bairdii
ENSTRUG00000020077	zc3hc1	96	42.916	ENSPCIG00000020619	ZC3HC1	100	44.081	Phascolarctos_cinereus
ENSTRUG00000020077	zc3hc1	100	66.000	ENSPFOG00000003466	zc3hc1	100	66.000	Poecilia_formosa
ENSTRUG00000020077	zc3hc1	100	65.800	ENSPLAG00000022211	zc3hc1	100	65.800	Poecilia_latipinna
ENSTRUG00000020077	zc3hc1	100	65.800	ENSPMEG00000001458	zc3hc1	100	65.800	Poecilia_mexicana
ENSTRUG00000020077	zc3hc1	100	64.800	ENSPREG00000004004	zc3hc1	100	64.800	Poecilia_reticulata
ENSTRUG00000020077	zc3hc1	94	40.206	ENSPPYG00000017998	ZC3HC1	94	40.825	Pongo_abelii
ENSTRUG00000020077	zc3hc1	88	42.729	ENSPCAG00000001182	ZC3HC1	95	43.177	Procavia_capensis
ENSTRUG00000020077	zc3hc1	95	42.505	ENSPCOG00000017354	ZC3HC1	93	47.604	Propithecus_coquereli
ENSTRUG00000020077	zc3hc1	99	39.250	ENSPVAG00000003195	ZC3HC1	98	39.961	Pteropus_vampyrus
ENSTRUG00000020077	zc3hc1	99	67.203	ENSPNYG00000020692	zc3hc1	99	67.203	Pundamilia_nyererei
ENSTRUG00000020077	zc3hc1	98	47.835	ENSPNAG00000020746	zc3hc1	100	47.835	Pygocentrus_nattereri
ENSTRUG00000020077	zc3hc1	95	40.891	ENSRNOG00000010154	Zc3hc1	95	40.891	Rattus_norvegicus
ENSTRUG00000020077	zc3hc1	90	43.629	ENSRBIG00000029409	ZC3HC1	99	50.523	Rhinopithecus_bieti
ENSTRUG00000020077	zc3hc1	95	42.710	ENSRROG00000041831	ZC3HC1	93	48.553	Rhinopithecus_roxellana
ENSTRUG00000020077	zc3hc1	76	52.294	ENSSBOG00000032787	ZC3HC1	92	52.294	Saimiri_boliviensis_boliviensis
ENSTRUG00000020077	zc3hc1	88	45.011	ENSSHAG00000002529	ZC3HC1	94	44.346	Sarcophilus_harrisii
ENSTRUG00000020077	zc3hc1	100	52.569	ENSSFOG00015003667	zc3hc1	96	52.569	Scleropages_formosus
ENSTRUG00000020077	zc3hc1	99	67.404	ENSSMAG00000000647	zc3hc1	90	67.404	Scophthalmus_maximus
ENSTRUG00000020077	zc3hc1	99	69.215	ENSSDUG00000004241	zc3hc1	97	69.215	Seriola_dumerili
ENSTRUG00000020077	zc3hc1	99	69.014	ENSSLDG00000025056	zc3hc1	97	69.014	Seriola_lalandi_dorsalis
ENSTRUG00000020077	zc3hc1	99	37.500	ENSSARG00000012013	ZC3HC1	98	37.695	Sorex_araneus
ENSTRUG00000020077	zc3hc1	81	39.394	ENSSPUG00000000778	ZC3HC1	80	39.394	Sphenodon_punctatus
ENSTRUG00000020077	zc3hc1	100	69.200	ENSSPAG00000020041	zc3hc1	100	69.200	Stegastes_partitus
ENSTRUG00000020077	zc3hc1	95	41.942	ENSSSCG00000016565	ZC3HC1	100	41.250	Sus_scrofa
ENSTRUG00000020077	zc3hc1	99	83.537	ENSTNIG00000007585	zc3hc1	99	83.621	Tetraodon_nigroviridis
ENSTRUG00000020077	zc3hc1	94	35.270	ENSTBEG00000005216	ZC3HC1	94	35.331	Tupaia_belangeri
ENSTRUG00000020077	zc3hc1	95	42.191	ENSTTRG00000008458	ZC3HC1	99	42.394	Tursiops_truncatus
ENSTRUG00000020077	zc3hc1	95	42.181	ENSUAMG00000020249	ZC3HC1	95	42.798	Ursus_americanus
ENSTRUG00000020077	zc3hc1	95	42.623	ENSUMAG00000009268	ZC3HC1	94	43.271	Ursus_maritimus
ENSTRUG00000020077	zc3hc1	62	43.087	ENSVPAG00000010846	ZC3HC1	61	44.051	Vicugna_pacos
ENSTRUG00000020077	zc3hc1	89	42.241	ENSVVUG00000012386	ZC3HC1	92	42.641	Vulpes_vulpes
ENSTRUG00000020077	zc3hc1	90	40.175	ENSXETG00000033900	zc3hc1	94	40.175	Xenopus_tropicalis
ENSTRUG00000020077	zc3hc1	100	63.527	ENSXCOG00000013570	zc3hc1	100	63.527	Xiphophorus_couchianus
ENSTRUG00000020077	zc3hc1	91	67.108	ENSXMAG00000010979	zc3hc1	97	67.108	Xiphophorus_maculatus