EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000020127 (Gene tree)
Gene ID: 101064600
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3399 bases
Position: chrHE591843.1:247402-250800
Accession: 101064600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055795	RRM_1	PF00076.22	2e-06	1	1
ENSTRUP00000050378	RRM_1	PF00076.22	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053202	-	453	-	ENSTRUP00000050378	150 (aa)	-	-
ENSTRUT00000050083	-	306	XM_003978589	ENSTRUP00000055795	101 (aa)	XP_003978638	-

Gene Model

Click here to download ENSTRUG00000020127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020127	slirp	74	54.667	ENSG00000119705	SLIRP	92	54.930	Homo_sapiens
ENSTRUG00000020127	slirp	98	72.727	ENSAPOG00000001298	slirp	98	72.727	Acanthochromis_polyacanthus
ENSTRUG00000020127	slirp	70	53.521	ENSAMEG00000003975	SLIRP	75	56.522	Ailuropoda_melanoleuca
ENSTRUG00000020127	slirp	96	72.165	ENSACIG00000023083	slirp	95	72.165	Amphilophus_citrinellus
ENSTRUG00000020127	slirp	96	73.196	ENSAOCG00000006342	slirp	97	73.196	Amphiprion_ocellaris
ENSTRUG00000020127	slirp	96	73.196	ENSAPEG00000015719	-	98	73.196	Amphiprion_percula
ENSTRUG00000020127	slirp	96	73.196	ENSAPEG00000015917	slirp	97	73.196	Amphiprion_percula
ENSTRUG00000020127	slirp	98	72.727	ENSATEG00000013525	slirp	98	72.727	Anabas_testudineus
ENSTRUG00000020127	slirp	99	56.000	ENSAMXG00000018693	slirp	99	56.000	Astyanax_mexicanus
ENSTRUG00000020127	slirp	74	56.000	ENSCJAG00000016946	SLIRP	95	47.191	Callithrix_jacchus
ENSTRUG00000020127	slirp	88	50.000	ENSCAFG00020015876	-	80	50.000	Canis_lupus_dingo
ENSTRUG00000020127	slirp	74	54.667	ENSCCAG00000030130	SLIRP	99	45.133	Cebus_capucinus
ENSTRUG00000020127	slirp	71	54.167	ENSCATG00000036327	SLIRP	95	46.067	Cercocebus_atys
ENSTRUG00000020127	slirp	74	53.333	ENSCSAG00000011736	SLIRP	83	46.154	Chlorocebus_sabaeus
ENSTRUG00000020127	slirp	81	57.317	ENSCPBG00000026327	SLIRP	80	60.000	Chrysemys_picta_bellii
ENSTRUG00000020127	slirp	67	57.353	ENSCANG00000032892	SLIRP	90	48.315	Colobus_angolensis_palliatus
ENSTRUG00000020127	slirp	72	49.315	ENSCGRG00001024068	Slirp	65	49.315	Cricetulus_griseus_chok1gshd
ENSTRUG00000020127	slirp	72	49.315	ENSCGRG00000017440	Slirp	65	49.315	Cricetulus_griseus_crigri
ENSTRUG00000020127	slirp	84	57.647	ENSCSEG00000015766	slirp	86	57.647	Cynoglossus_semilaevis
ENSTRUG00000020127	slirp	90	68.132	ENSCVAG00000012504	slirp	86	68.132	Cyprinodon_variegatus
ENSTRUG00000020127	slirp	94	66.316	ENSDARG00000097753	slirp	94	66.327	Danio_rerio
ENSTRUG00000020127	slirp	91	44.086	ENSDNOG00000007721	SLIRP	83	44.086	Dasypus_novemcinctus
ENSTRUG00000020127	slirp	76	50.649	ENSDORG00000012379	Slirp	68	50.649	Dipodomys_ordii
ENSTRUG00000020127	slirp	75	51.316	ENSETEG00000010345	SLIRP	83	41.758	Echinops_telfairi
ENSTRUG00000020127	slirp	88	48.889	ENSEASG00005020193	SLIRP	80	48.889	Equus_asinus_asinus
ENSTRUG00000020127	slirp	84	44.186	ENSEEUG00000007257	SLIRP	84	44.186	Erinaceus_europaeus
ENSTRUG00000020127	slirp	95	69.792	ENSELUG00000016800	slirp	94	69.792	Esox_lucius
ENSTRUG00000020127	slirp	67	54.412	ENSFCAG00000036326	SLIRP	68	54.412	Felis_catus
ENSTRUG00000020127	slirp	78	46.835	ENSFALG00000012583	SLIRP	83	47.191	Ficedula_albicollis
ENSTRUG00000020127	slirp	83	49.412	ENSFDAG00000008347	SLIRP	74	49.412	Fukomys_damarensis
ENSTRUG00000020127	slirp	63	76.562	ENSFHEG00000004709	slirp	70	76.562	Fundulus_heteroclitus
ENSTRUG00000020127	slirp	99	67.000	ENSGMOG00000016948	slirp	95	67.000	Gadus_morhua
ENSTRUG00000020127	slirp	91	46.809	ENSGALG00000031238	SLIRP	94	46.809	Gallus_gallus
ENSTRUG00000020127	slirp	98	65.657	ENSGAFG00000010998	slirp	98	65.657	Gambusia_affinis
ENSTRUG00000020127	slirp	82	72.289	ENSGACG00000020137	slirp	95	74.699	Gasterosteus_aculeatus
ENSTRUG00000020127	slirp	97	56.566	ENSGAGG00000009953	SLIRP	68	56.566	Gopherus_agassizii
ENSTRUG00000020127	slirp	74	54.667	ENSGGOG00000011059	-	95	48.315	Gorilla_gorilla
ENSTRUG00000020127	slirp	88	43.333	ENSHGLG00000018491	SLIRP	80	43.333	Heterocephalus_glaber_female
ENSTRUG00000020127	slirp	88	43.333	ENSHGLG00100014153	SLIRP	80	43.333	Heterocephalus_glaber_male
ENSTRUG00000020127	slirp	99	71.000	ENSHCOG00000006795	slirp	100	71.000	Hippocampus_comes
ENSTRUG00000020127	slirp	100	65.347	ENSIPUG00000010214	SLIRP	100	65.347	Ictalurus_punctatus
ENSTRUG00000020127	slirp	88	46.667	ENSSTOG00000034316	SLIRP	81	46.154	Ictidomys_tridecemlineatus
ENSTRUG00000020127	slirp	98	61.616	ENSKMAG00000002038	slirp	94	61.616	Kryptolebias_marmoratus
ENSTRUG00000020127	slirp	98	64.646	ENSLBEG00000007564	slirp	98	64.646	Labrus_bergylta
ENSTRUG00000020127	slirp	99	68.000	ENSLACG00000013434	SLIRP	95	68.000	Latimeria_chalumnae
ENSTRUG00000020127	slirp	74	53.333	ENSMFAG00000042960	SLIRP	95	46.067	Macaca_fascicularis
ENSTRUG00000020127	slirp	83	50.000	ENSMMUG00000029256	SLIRP	95	46.067	Macaca_mulatta
ENSTRUG00000020127	slirp	74	53.333	ENSMNEG00000028921	SLIRP	95	46.067	Macaca_nemestrina
ENSTRUG00000020127	slirp	67	54.412	ENSMLEG00000043644	SLIRP	90	46.067	Mandrillus_leucophaeus
ENSTRUG00000020127	slirp	96	74.227	ENSMZEG00005004617	slirp	97	74.227	Maylandia_zebra
ENSTRUG00000020127	slirp	88	46.667	ENSMAUG00000003857	Slirp	80	46.667	Mesocricetus_auratus
ENSTRUG00000020127	slirp	88	48.315	ENSMICG00000012080	SLIRP	79	48.315	Microcebus_murinus
ENSTRUG00000020127	slirp	72	53.425	ENSMOCG00000016019	Slirp	68	54.286	Microtus_ochrogaster
ENSTRUG00000020127	slirp	98	72.727	ENSMMOG00000018268	slirp	98	72.727	Mola_mola
ENSTRUG00000020127	slirp	70	52.113	ENSMODG00000005207	-	99	53.521	Monodelphis_domestica
ENSTRUG00000020127	slirp	94	71.579	ENSMALG00000012581	slirp	96	71.579	Monopterus_albus
ENSTRUG00000020127	slirp	75	52.632	MGP_CAROLIEiJ_G0017995	Slirp	69	52.632	Mus_caroli
ENSTRUG00000020127	slirp	75	52.632	ENSMUSG00000021040	Slirp	79	50.633	Mus_musculus
ENSTRUG00000020127	slirp	75	52.632	MGP_SPRETEiJ_G0018840	Slirp	67	52.632	Mus_spretus
ENSTRUG00000020127	slirp	84	49.412	ENSMLUG00000029544	-	74	47.059	Myotis_lucifugus
ENSTRUG00000020127	slirp	73	51.351	ENSMLUG00000024998	-	66	51.351	Myotis_lucifugus
ENSTRUG00000020127	slirp	83	48.837	ENSNGAG00000016363	Slirp	81	48.837	Nannospalax_galili
ENSTRUG00000020127	slirp	75	47.368	ENSNLEG00000027238	-	94	40.909	Nomascus_leucogenys
ENSTRUG00000020127	slirp	75	50.000	ENSNLEG00000032459	-	92	42.529	Nomascus_leucogenys
ENSTRUG00000020127	slirp	74	50.667	ENSODEG00000012580	SLIRP	76	50.704	Octodon_degus
ENSTRUG00000020127	slirp	96	75.258	ENSONIG00000011692	slirp	97	75.258	Oreochromis_niloticus
ENSTRUG00000020127	slirp	75	59.211	ENSOANG00000022366	SLIRP	68	59.211	Ornithorhynchus_anatinus
ENSTRUG00000020127	slirp	98	72.727	ENSORLG00000010761	slirp	76	72.727	Oryzias_latipes
ENSTRUG00000020127	slirp	98	73.737	ENSORLG00020022188	slirp	98	73.737	Oryzias_latipes_hni
ENSTRUG00000020127	slirp	97	70.408	ENSORLG00015020171	slirp	96	70.408	Oryzias_latipes_hsok
ENSTRUG00000020127	slirp	98	73.737	ENSOMEG00000019321	slirp	98	73.737	Oryzias_melastigma
ENSTRUG00000020127	slirp	88	50.562	ENSPPAG00000040710	-	95	48.315	Pan_paniscus
ENSTRUG00000020127	slirp	67	54.412	ENSPPRG00000014350	SLIRP	68	54.412	Panthera_pardus
ENSTRUG00000020127	slirp	67	54.412	ENSPTIG00000014196	SLIRP	68	54.412	Panthera_tigris_altaica
ENSTRUG00000020127	slirp	74	54.667	ENSPTRG00000030691	SLIRP	95	48.315	Pan_troglodytes
ENSTRUG00000020127	slirp	74	54.667	ENSPANG00000026323	SLIRP	95	47.191	Papio_anubis
ENSTRUG00000020127	slirp	64	66.154	ENSPKIG00000008831	slirp	64	66.154	Paramormyrops_kingsleyae
ENSTRUG00000020127	slirp	80	75.309	ENSPMGG00000010541	slirp	93	76.829	Periophthalmus_magnuspinnatus
ENSTRUG00000020127	slirp	88	42.697	ENSPEMG00000013234	Slirp	95	42.857	Peromyscus_maniculatus_bairdii
ENSTRUG00000020127	slirp	87	47.727	ENSPMAG00000009355	slirp	97	47.727	Petromyzon_marinus
ENSTRUG00000020127	slirp	70	50.704	ENSPCIG00000026842	-	96	44.444	Phascolarctos_cinereus
ENSTRUG00000020127	slirp	98	67.677	ENSPFOG00000006758	slirp	98	67.677	Poecilia_formosa
ENSTRUG00000020127	slirp	98	67.677	ENSPLAG00000011140	slirp	98	67.677	Poecilia_latipinna
ENSTRUG00000020127	slirp	98	67.677	ENSPMEG00000019535	slirp	98	67.677	Poecilia_mexicana
ENSTRUG00000020127	slirp	98	67.677	ENSPREG00000011673	slirp	98	67.677	Poecilia_reticulata
ENSTRUG00000020127	slirp	70	56.338	ENSPPYG00000006030	SLIRP	81	49.438	Pongo_abelii
ENSTRUG00000020127	slirp	90	47.253	ENSPCOG00000015159	SLIRP	78	47.253	Propithecus_coquereli
ENSTRUG00000020127	slirp	99	70.000	ENSPNAG00000008633	slirp	100	70.000	Pygocentrus_nattereri
ENSTRUG00000020127	slirp	74	56.000	ENSRBIG00000032222	-	95	47.191	Rhinopithecus_bieti
ENSTRUG00000020127	slirp	65	56.061	ENSRBIG00000031396	-	86	48.276	Rhinopithecus_bieti
ENSTRUG00000020127	slirp	74	52.000	ENSRBIG00000035817	-	84	43.956	Rhinopithecus_bieti
ENSTRUG00000020127	slirp	67	54.412	ENSRBIG00000032998	-	88	45.918	Rhinopithecus_bieti
ENSTRUG00000020127	slirp	74	56.000	ENSRROG00000036656	-	72	55.882	Rhinopithecus_roxellana
ENSTRUG00000020127	slirp	67	55.882	ENSRROG00000017133	-	75	54.054	Rhinopithecus_roxellana
ENSTRUG00000020127	slirp	71	56.944	ENSRROG00000041312	-	89	47.253	Rhinopithecus_roxellana
ENSTRUG00000020127	slirp	65	57.576	ENSRROG00000035604	-	86	49.425	Rhinopithecus_roxellana
ENSTRUG00000020127	slirp	74	52.000	ENSSBOG00000020014	SLIRP	72	55.882	Saimiri_boliviensis_boliviensis
ENSTRUG00000020127	slirp	98	56.566	ENSSFOG00015011165	slirp	99	56.566	Scleropages_formosus
ENSTRUG00000020127	slirp	98	47.525	ENSSMAG00000012930	slirp	98	47.525	Scophthalmus_maximus
ENSTRUG00000020127	slirp	98	79.798	ENSSDUG00000021883	slirp	64	79.798	Seriola_dumerili
ENSTRUG00000020127	slirp	98	79.798	ENSSLDG00000023136	slirp	89	79.798	Seriola_lalandi_dorsalis
ENSTRUG00000020127	slirp	82	59.770	ENSSPUG00000009346	SLIRP	96	54.545	Sphenodon_punctatus
ENSTRUG00000020127	slirp	98	64.646	ENSSPAG00000013477	slirp	98	64.646	Stegastes_partitus
ENSTRUG00000020127	slirp	88	46.667	ENSSSCG00000028167	SLIRP	80	46.667	Sus_scrofa
ENSTRUG00000020127	slirp	78	49.367	ENSTGUG00000012337	SLIRP	86	47.826	Taeniopygia_guttata
ENSTRUG00000020127	slirp	88	51.111	ENSUAMG00000022445	SLIRP	80	51.111	Ursus_americanus
ENSTRUG00000020127	slirp	88	51.111	ENSUMAG00000007166	SLIRP	80	51.111	Ursus_maritimus
ENSTRUG00000020127	slirp	78	52.500	ENSVPAG00000001781	SLIRP	73	52.500	Vicugna_pacos
ENSTRUG00000020127	slirp	88	48.889	ENSVVUG00000004436	SLIRP	68	53.947	Vulpes_vulpes
ENSTRUG00000020127	slirp	81	73.171	ENSXETG00000030343	SLIRP	91	74.390	Xenopus_tropicalis
ENSTRUG00000020127	slirp	98	64.646	ENSXCOG00000009422	slirp	98	64.646	Xiphophorus_couchianus
ENSTRUG00000020127	slirp	98	66.667	ENSXMAG00000015655	slirp	98	66.667	Xiphophorus_maculatus