EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000020158 (Gene tree)
Gene ID
101071248
Gene Symbol
-
Alias
-
Full Name
heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
7325 bases
Position
chrHE591759.1:83849-91173
Accession
101071248
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000004948RRM_1PF00076.222.3e-1311
ENSTRUP00000055447RRM_1PF00076.222.5e-1311
ENSTRUP00000048150RRM_1PF00076.222.5e-1311
ENSTRUP00000049350RRM_1PF00076.222.5e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000055205-3569-ENSTRUP00000049350325 (aa)--
ENSTRUT00000053889-3482-ENSTRUP00000055447322 (aa)--
ENSTRUT00000004978-3421XM_011619058ENSTRUP00000004948301 (aa)XP_011617360H2RXS8
ENSTRUT00000053653-3387XM_011619056ENSTRUP00000048150318 (aa)XP_011617358UPI0005D1760E
Gene Model
Click here to download ENSTRUG00000020158's gene model file
Pathways
Pathway IDPathway NameSource
tru03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020158's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000020158-7353.125ENSTRUG00000003829-7353.774
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000020158-9447.038ENSG00000184672RALYL9374.684Homo_sapiens
ENSTRUG00000020158-8287.149ENSAPOG00000006963hnrnpc8385.771Acanthochromis_polyacanthus
ENSTRUG00000020158-8487.451ENSACIG00000000270-8391.705Amphilophus_citrinellus
ENSTRUG00000020158-9973.529ENSACIG00000016568-8287.558Amphilophus_citrinellus
ENSTRUG00000020158-9971.761ENSAOCG00000021616-9371.777Amphiprion_ocellaris
ENSTRUG00000020158-8286.747ENSAOCG00000003896-8385.375Amphiprion_ocellaris
ENSTRUG00000020158-8286.747ENSAPEG00000001489-8385.375Amphiprion_percula
ENSTRUG00000020158-9969.508ENSAPEG00000019962-8282.422Amphiprion_percula
ENSTRUG00000020158-8488.538ENSATEG00000011734-8588.538Anabas_testudineus
ENSTRUG00000020158-9274.286ENSATEG00000018006-8585.652Anabas_testudineus
ENSTRUG00000020158-7249.362ENSAPLG00000015574RALYL7652.232Anas_platyrhynchos
ENSTRUG00000020158-8543.357ENSACAG00000028464RALYL7551.786Anolis_carolinensis
ENSTRUG00000020158-9446.690ENSANAG00000023383RALYL7455.189Aotus_nancymaae
ENSTRUG00000020158-8284.800ENSACLG00000000995-8287.273Astatotilapia_calliptera
ENSTRUG00000020158-8475.194ENSACLG00000005707-8976.030Astatotilapia_calliptera
ENSTRUG00000020158-8284.400ENSACLG00000013636-8585.039Astatotilapia_calliptera
ENSTRUG00000020158-6874.519ENSAMXG00000042946hnrnpc9872.775Astyanax_mexicanus
ENSTRUG00000020158-8375.697ENSAMXG00000034915zgc:557338970.588Astyanax_mexicanus
ENSTRUG00000020158-9447.038ENSCJAG00000000402RALYL7455.660Callithrix_jacchus
ENSTRUG00000020158-8745.196ENSCPOG00000012314RALYL7453.846Cavia_porcellus
ENSTRUG00000020158-7253.604ENSCCAG00000025003RALYL7774.684Cebus_capucinus
ENSTRUG00000020158-9447.038ENSCATG00000042145RALYL7455.660Cercocebus_atys
ENSTRUG00000020158-9444.482ENSCLAG00000005228RALYL7552.915Chinchilla_lanigera
ENSTRUG00000020158-6949.115ENSCHOG00000013228RALYL7549.115Choloepus_hoffmanni
ENSTRUG00000020158-9447.038ENSCANG00000039144RALYL7455.660Colobus_angolensis_palliatus
ENSTRUG00000020158-9444.333ENSCGRG00001009241Ralyl7552.232Cricetulus_griseus_chok1gshd
ENSTRUG00000020158-7279.091ENSCSEG00000019769-7478.539Cynoglossus_semilaevis
ENSTRUG00000020158-7579.130ENSCSEG00000021349-7976.078Cynoglossus_semilaevis
ENSTRUG00000020158-8281.746ENSCVAG00000016981-9174.832Cyprinodon_variegatus
ENSTRUG00000020158-9069.818ENSCVAG00000002797-8669.141Cyprinodon_variegatus
ENSTRUG00000020158-8767.376ENSDARG00000053810hnrnpc8074.609Danio_rerio
ENSTRUG00000020158-8378.400ENSDARG00000103845zgc:557338080.095Danio_rerio
ENSTRUG00000020158-9743.042ENSDORG00000003721Ralyl7552.679Dipodomys_ordii
ENSTRUG00000020158-5453.448ENSETEG00000014028RALYL8256.790Echinops_telfairi
ENSTRUG00000020158-7146.018ENSEBUG00000012363hnrnpc6646.753Eptatretus_burgeri
ENSTRUG00000020158-7148.636ENSEBUG00000006049RALYL7448.341Eptatretus_burgeri
ENSTRUG00000020158-9444.333ENSEEUG00000007202RALYL7652.915Erinaceus_europaeus
ENSTRUG00000020158-8378.824ENSELUG00000004132-9074.818Esox_lucius
ENSTRUG00000020158-8076.834ENSELUG00000007714-9073.034Esox_lucius
ENSTRUG00000020158-6954.419ENSFALG00000008647RALYL9755.607Ficedula_albicollis
ENSTRUG00000020158-8980.000ENSFHEG00000003605-8677.481Fundulus_heteroclitus
ENSTRUG00000020158-8477.037ENSFHEG00000007278-9472.964Fundulus_heteroclitus
ENSTRUG00000020158-7252.232ENSGALG00000036938RALYL7552.232Gallus_gallus
ENSTRUG00000020158-8980.370ENSGAFG00000020486-8382.432Gambusia_affinis
ENSTRUG00000020158-9969.231ENSGAFG00000020992-7887.097Gambusia_affinis
ENSTRUG00000020158-7372.444ENSGACG00000018932-8972.889Gasterosteus_aculeatus
ENSTRUG00000020158-8879.554ENSGACG00000017772-9781.746Gasterosteus_aculeatus
ENSTRUG00000020158-9447.038ENSGGOG00000000841RALYL7455.660Gorilla_gorilla
ENSTRUG00000020158-9972.403ENSHBUG00000010527-8180.233Haplochromis_burtoni
ENSTRUG00000020158-8285.200ENSHBUG00000018342-8385.827Haplochromis_burtoni
ENSTRUG00000020158-9444.147ENSHGLG00000004866RALYL7553.125Heterocephalus_glaber_female
ENSTRUG00000020158-9444.147ENSHGLG00100017480RALYL7553.125Heterocephalus_glaber_male
ENSTRUG00000020158-8276.806ENSHCOG00000012333hnrnpc9073.646Hippocampus_comes
ENSTRUG00000020158-8375.794ENSIPUG00000008666zgc:557339579.724Ictalurus_punctatus
ENSTRUG00000020158-8375.494ENSIPUG00000011271hnrnpc9880.444Ictalurus_punctatus
ENSTRUG00000020158-9444.000ENSSTOG00000012583RALYL7652.232Ictidomys_tridecemlineatus
ENSTRUG00000020158-8276.587ENSKMAG00000018265-8379.623Kryptolebias_marmoratus
ENSTRUG00000020158-8985.185ENSKMAG00000011170-8386.561Kryptolebias_marmoratus
ENSTRUG00000020158-8982.222ENSLBEG00000006979-8583.806Labrus_bergylta
ENSTRUG00000020158-8377.866ENSLBEG00000006193-8081.176Labrus_bergylta
ENSTRUG00000020158-9078.014ENSLBEG00000024418-8679.151Labrus_bergylta
ENSTRUG00000020158-8469.084ENSLOCG00000002560hnrnpc9068.421Lepisosteus_oculatus
ENSTRUG00000020158-9447.038ENSMNEG00000033288RALYL7455.660Macaca_nemestrina
ENSTRUG00000020158-9447.038ENSMLEG00000038284RALYL7455.660Mandrillus_leucophaeus
ENSTRUG00000020158-8287.550ENSMAMG00000012236-8485.769Mastacembelus_armatus
ENSTRUG00000020158-9276.950ENSMAMG00000008033-8982.101Mastacembelus_armatus
ENSTRUG00000020158-9972.078ENSMZEG00005024249-8179.845Maylandia_zebra
ENSTRUG00000020158-8284.800ENSMZEG00005020460-8881.783Maylandia_zebra
ENSTRUG00000020158-9444.333ENSMAUG00000015149Ralyl7552.232Mesocricetus_auratus
ENSTRUG00000020158-9446.181ENSMICG00000005558RALYL8570.238Microcebus_murinus
ENSTRUG00000020158-9444.333ENSMOCG00000017371Ralyl7552.232Microtus_ochrogaster
ENSTRUG00000020158-8487.891ENSMMOG00000021465-9087.109Mola_mola
ENSTRUG00000020158-9273.214ENSMMOG00000019520-8780.687Mola_mola
ENSTRUG00000020158-8476.680ENSMALG00000007520-8576.680Monopterus_albus
ENSTRUG00000020158-8481.102ENSMALG00000014623-8377.186Monopterus_albus
ENSTRUG00000020158-9444.667ENSMUSG00000039717Ralyl9375.949Mus_musculus
ENSTRUG00000020158-9445.000ENSMPUG00000010724RALYL7551.339Mustela_putorius_furo
ENSTRUG00000020158-9443.667ENSNGAG00000013375Ralyl7552.232Nannospalax_galili
ENSTRUG00000020158-8584.825ENSNBRG00000004912-9482.895Neolamprologus_brichardi
ENSTRUG00000020158-9868.456ENSNBRG00000015676-7687.500Neolamprologus_brichardi
ENSTRUG00000020158-9447.038ENSNLEG00000002702RALYL7852.991Nomascus_leucogenys
ENSTRUG00000020158-5846.632ENSOPRG00000013650-9846.392Ochotona_princeps
ENSTRUG00000020158-9445.151ENSODEG00000001012RALYL7553.571Octodon_degus
ENSTRUG00000020158-8980.952ENSONIG00000007859-9184.470Oreochromis_niloticus
ENSTRUG00000020158-9972.727ENSONIG00000018350-8180.233Oreochromis_niloticus
ENSTRUG00000020158-8274.900ENSORLG00000009999-8376.471Oryzias_latipes
ENSTRUG00000020158-8274.903ENSORLG00000003144-8277.574Oryzias_latipes
ENSTRUG00000020158-8274.502ENSORLG00020018228hnrnpc8376.078Oryzias_latipes_hni
ENSTRUG00000020158-8274.903ENSORLG00015009460-8277.574Oryzias_latipes_hsok
ENSTRUG00000020158-8274.900ENSORLG00015019755-8376.471Oryzias_latipes_hsok
ENSTRUG00000020158-8275.299ENSOMEG00000020488-8376.078Oryzias_melastigma
ENSTRUG00000020158-8278.571ENSOMEG00000022665-8380.755Oryzias_melastigma
ENSTRUG00000020158-9447.038ENSPPAG00000038705RALYL8150.410Pan_paniscus
ENSTRUG00000020158-9447.586ENSPPRG00000018612RALYL7455.140Panthera_pardus
ENSTRUG00000020158-9447.586ENSPTIG00000020331RALYL7455.140Panthera_tigris_altaica
ENSTRUG00000020158-9447.038ENSPTRG00000020381RALYL7455.660Pan_troglodytes
ENSTRUG00000020158-9447.038ENSPANG00000029305RALYL7455.660Papio_anubis
ENSTRUG00000020158-8476.336ENSPKIG00000008592-8977.273Paramormyrops_kingsleyae
ENSTRUG00000020158-9075.357ENSPKIG00000022837-8480.377Paramormyrops_kingsleyae
ENSTRUG00000020158-7250.211ENSPSIG00000011135RALYL7552.232Pelodiscus_sinensis
ENSTRUG00000020158-7174.884ENSPMGG00000017774-9166.055Periophthalmus_magnuspinnatus
ENSTRUG00000020158-7187.383ENSPMGG00000013144-9179.916Periophthalmus_magnuspinnatus
ENSTRUG00000020158-9444.333ENSPEMG00000016447Ralyl7552.232Peromyscus_maniculatus_bairdii
ENSTRUG00000020158-6951.542ENSPMAG00000002407RALYL9751.111Petromyzon_marinus
ENSTRUG00000020158-9769.180ENSPFOG00000002643-8477.985Poecilia_formosa
ENSTRUG00000020158-8981.181ENSPFOG00000001583-8677.947Poecilia_formosa
ENSTRUG00000020158-8276.494ENSPLAG00000000061-8279.167Poecilia_latipinna
ENSTRUG00000020158-8980.741ENSPLAG00000015305-8679.389Poecilia_latipinna
ENSTRUG00000020158-8982.222ENSPMEG00000004802-8680.534Poecilia_mexicana
ENSTRUG00000020158-8276.494ENSPMEG00000016524-8278.788Poecilia_mexicana
ENSTRUG00000020158-8979.630ENSPREG00000007928-8679.771Poecilia_reticulata
ENSTRUG00000020158-8275.697ENSPREG00000001852-8878.409Poecilia_reticulata
ENSTRUG00000020158-8544.484ENSPVAG00000010821RALYL7451.786Pteropus_vampyrus
ENSTRUG00000020158-8583.268ENSPNYG00000020293-8884.436Pundamilia_nyererei
ENSTRUG00000020158-8475.581ENSPNYG00000003747-8976.404Pundamilia_nyererei
ENSTRUG00000020158-8371.815ENSPNAG00000019200zgc:557337376.923Pygocentrus_nattereri
ENSTRUG00000020158-7778.298ENSPNAG00000015686hnrnpc8673.622Pygocentrus_nattereri
ENSTRUG00000020158-9447.038ENSRROG00000023925RALYL8272.840Rhinopithecus_roxellana
ENSTRUG00000020158-8473.180ENSSFOG00015012015-8382.028Scleropages_formosus
ENSTRUG00000020158-8375.862ENSSFOG00015012924-8092.405Scleropages_formosus
ENSTRUG00000020158-8283.936ENSSMAG00000013592-8182.609Scophthalmus_maximus
ENSTRUG00000020158-9766.441ENSSMAG00000011147-7985.185Scophthalmus_maximus
ENSTRUG00000020158-9879.264ENSSDUG00000006730-8480.608Seriola_dumerili
ENSTRUG00000020158-8988.806ENSSDUG00000001723-8586.538Seriola_dumerili
ENSTRUG00000020158-8482.677ENSSLDG00000007474-9180.608Seriola_lalandi_dorsalis
ENSTRUG00000020158-8788.973ENSSLDG00000007454-8686.154Seriola_lalandi_dorsalis
ENSTRUG00000020158-8887.925ENSSPAG00000023204-8386.957Stegastes_partitus
ENSTRUG00000020158-8478.824ENSSPAG00000013996-8381.818Stegastes_partitus
ENSTRUG00000020158-7249.787ENSTGUG00000011689RALYL7652.232Taeniopygia_guttata
ENSTRUG00000020158-9977.982ENSTNIG00000007427-9778.899Tetraodon_nigroviridis
ENSTRUG00000020158-8377.866ENSTNIG00000000334-9472.308Tetraodon_nigroviridis
ENSTRUG00000020158-7944.314ENSTBEG00000005551RALYL8747.297Tupaia_belangeri
ENSTRUG00000020158-9443.624ENSTTRG00000015762RALYL7451.351Tursiops_truncatus
ENSTRUG00000020158-9444.444ENSVPAG00000008501RALYL7453.081Vicugna_pacos
ENSTRUG00000020158-5184.663ENSXCOG00000019434-9870.690Xiphophorus_couchianus
ENSTRUG00000020158-8776.030ENSXCOG00000006552-8274.308Xiphophorus_couchianus
ENSTRUG00000020158-8981.481ENSXMAG00000009333-8679.771Xiphophorus_maculatus
ENSTRUG00000020158-8275.697ENSXMAG00000022849-8678.409Xiphophorus_maculatus

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