EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000020474 (Gene tree)
Gene ID: 101068595
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 17729 bases
Position: chr5:9531061-9548789
Accession: 101068595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052155	zf-C2H2_jaz	PF12171.8	4.6e-06	1	1
ENSTRUP00000052155	G-patch	PF01585.23	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051068	-	4671	XM_003964867	ENSTRUP00000052155	1480 (aa)	XP_003964916	UPI000298E27F

Gene Model

Click here to download ENSTRUG00000020474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020474	gpatch8	100	79.000	ENSAPOG00000023938	gpatch8	100	79.667	Acanthochromis_polyacanthus
ENSTRUG00000020474	gpatch8	100	77.031	ENSACIG00000012241	gpatch8	100	78.096	Amphilophus_citrinellus
ENSTRUG00000020474	gpatch8	100	78.933	ENSAOCG00000018102	gpatch8	100	79.600	Amphiprion_ocellaris
ENSTRUG00000020474	gpatch8	100	78.867	ENSAPEG00000016776	gpatch8	100	79.533	Amphiprion_percula
ENSTRUG00000020474	gpatch8	100	78.438	ENSATEG00000003247	gpatch8	100	79.306	Anabas_testudineus
ENSTRUG00000020474	gpatch8	100	78.348	ENSACLG00000004165	gpatch8	100	78.548	Astatotilapia_calliptera
ENSTRUG00000020474	gpatch8	100	75.848	ENSCSEG00000021277	gpatch8	100	75.848	Cynoglossus_semilaevis
ENSTRUG00000020474	gpatch8	100	75.631	ENSCVAG00000013477	gpatch8	100	76.541	Cyprinodon_variegatus
ENSTRUG00000020474	gpatch8	100	61.104	ENSDARG00000059768	gpatch8	56	56.407	Danio_rerio
ENSTRUG00000020474	gpatch8	56	60.665	ENSELUG00000019920	gpatch8	57	61.098	Esox_lucius
ENSTRUG00000020474	gpatch8	75	55.735	ENSFALG00000009554	GPATCH8	74	55.735	Ficedula_albicollis
ENSTRUG00000020474	gpatch8	55	68.339	ENSFHEG00000005791	gpatch8	100	75.149	Fundulus_heteroclitus
ENSTRUG00000020474	gpatch8	75	52.574	ENSGALG00000041556	GPATCH8	75	53.655	Gallus_gallus
ENSTRUG00000020474	gpatch8	100	75.284	ENSGAFG00000018138	gpatch8	100	75.733	Gambusia_affinis
ENSTRUG00000020474	gpatch8	100	78.059	ENSHBUG00000002669	gpatch8	100	78.590	Haplochromis_burtoni
ENSTRUG00000020474	gpatch8	74	55.594	ENSHGLG00100010738	GPATCH8	93	55.440	Heterocephalus_glaber_male
ENSTRUG00000020474	gpatch8	100	70.213	ENSHCOG00000017518	gpatch8	56	66.348	Hippocampus_comes
ENSTRUG00000020474	gpatch8	59	56.803	ENSIPUG00000015431	gpatch8	55	56.678	Ictalurus_punctatus
ENSTRUG00000020474	gpatch8	53	81.084	ENSKMAG00000018364	gpatch8	61	71.288	Kryptolebias_marmoratus
ENSTRUG00000020474	gpatch8	100	77.164	ENSLBEG00000023352	gpatch8	100	77.164	Labrus_bergylta
ENSTRUG00000020474	gpatch8	61	77.586	ENSLOCG00000012265	gpatch8	70	76.429	Lepisosteus_oculatus
ENSTRUG00000020474	gpatch8	100	78.500	ENSMAMG00000001618	gpatch8	100	78.902	Mastacembelus_armatus
ENSTRUG00000020474	gpatch8	100	78.414	ENSMZEG00005022584	gpatch8	100	78.614	Maylandia_zebra
ENSTRUG00000020474	gpatch8	61	75.987	ENSMMOG00000020472	gpatch8	61	76.070	Mola_mola
ENSTRUG00000020474	gpatch8	50	62.791	ENSMLUG00000013840	GPATCH8	52	64.286	Myotis_lucifugus
ENSTRUG00000020474	gpatch8	100	77.896	ENSNBRG00000016402	gpatch8	100	78.429	Neolamprologus_brichardi
ENSTRUG00000020474	gpatch8	100	76.021	ENSONIG00000001292	gpatch8	100	76.862	Oreochromis_niloticus
ENSTRUG00000020474	gpatch8	59	67.001	ENSORLG00000028497	gpatch8	61	68.723	Oryzias_latipes
ENSTRUG00000020474	gpatch8	61	68.730	ENSORLG00020006656	gpatch8	61	68.581	Oryzias_latipes_hni
ENSTRUG00000020474	gpatch8	59	67.001	ENSORLG00015019797	gpatch8	61	68.723	Oryzias_latipes_hsok
ENSTRUG00000020474	gpatch8	55	66.508	ENSOMEG00000023809	gpatch8	61	68.845	Oryzias_melastigma
ENSTRUG00000020474	gpatch8	53	58.145	ENSPKIG00000004860	GPATCH8	50	58.808	Paramormyrops_kingsleyae
ENSTRUG00000020474	gpatch8	61	51.348	ENSPKIG00000018753	gpatch8	56	52.859	Paramormyrops_kingsleyae
ENSTRUG00000020474	gpatch8	100	75.667	ENSPMGG00000000730	gpatch8	99	75.869	Periophthalmus_magnuspinnatus
ENSTRUG00000020474	gpatch8	100	75.818	ENSPFOG00000014833	gpatch8	100	76.420	Poecilia_formosa
ENSTRUG00000020474	gpatch8	100	75.752	ENSPLAG00000001035	gpatch8	100	76.353	Poecilia_latipinna
ENSTRUG00000020474	gpatch8	100	75.802	ENSPMEG00000024032	gpatch8	100	76.203	Poecilia_mexicana
ENSTRUG00000020474	gpatch8	100	75.885	ENSPREG00000008911	gpatch8	100	76.353	Poecilia_reticulata
ENSTRUG00000020474	gpatch8	100	78.148	ENSPNYG00000009426	gpatch8	100	78.681	Pundamilia_nyererei
ENSTRUG00000020474	gpatch8	59	58.919	ENSPNAG00000016200	gpatch8	58	60.161	Pygocentrus_nattereri
ENSTRUG00000020474	gpatch8	55	54.269	ENSSFOG00015021377	-	51	55.793	Scleropages_formosus
ENSTRUG00000020474	gpatch8	56	58.099	ENSSFOG00015004299	GPATCH8	51	60.253	Scleropages_formosus
ENSTRUG00000020474	gpatch8	96	79.078	ENSSDUG00000018065	gpatch8	100	79.766	Seriola_dumerili
ENSTRUG00000020474	gpatch8	100	80.226	ENSSLDG00000009225	gpatch8	100	80.956	Seriola_lalandi_dorsalis
ENSTRUG00000020474	gpatch8	100	79.000	ENSSPAG00000011368	gpatch8	100	79.600	Stegastes_partitus
ENSTRUG00000020474	gpatch8	57	61.091	ENSTBEG00000009486	GPATCH8	55	61.624	Tupaia_belangeri
ENSTRUG00000020474	gpatch8	56	66.387	ENSXETG00000008843	gpatch8	57	64.659	Xenopus_tropicalis
ENSTRUG00000020474	gpatch8	100	75.616	ENSXCOG00000016680	gpatch8	100	75.899	Xiphophorus_couchianus
ENSTRUG00000020474	gpatch8	100	75.384	ENSXMAG00000009217	gpatch8	100	75.933	Xiphophorus_maculatus