EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000020491 (Gene tree)
Gene ID: 101077619
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6876 bases
Position: chr3:7434725-7441600
Accession: 101077619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052329	RRM_1	PF00076.22	3.9e-33	1	2
ENSTRUP00000052329	RRM_1	PF00076.22	3.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049690	-	5555	XM_003963150	ENSTRUP00000052329	327 (aa)	XP_003963199	UPI0005D23016

Gene Model

Click here to download ENSTRUG00000020491's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000020491	-	76	49.383	ENSTRUG00000015362	hnrnpa0b	62	54.260
ENSTRUG00000020491	-	56	51.705	ENSTRUG00000021494	-	69	48.558
ENSTRUG00000020491	-	54	52.632	ENSTRUG00000010187	cirbpa	89	52.632
ENSTRUG00000020491	-	57	36.898	ENSTRUG00000008411	-	71	34.956
ENSTRUG00000020491	-	76	31.855	ENSTRUG00000018450	hnrnpd	62	37.624
ENSTRUG00000020491	-	59	38.919	ENSTRUG00000021248	msi2a	50	36.905
ENSTRUG00000020491	-	57	30.208	ENSTRUG00000012063	tardbp	57	30.208
ENSTRUG00000020491	-	62	36.782	ENSTRUG00000015636	-	50	36.782
ENSTRUG00000020491	-	56	36.612	ENSTRUG00000025954	hnrnpaba	72	34.454
ENSTRUG00000020491	-	59	79.167	ENSTRUG00000017504	hnrnpa3	61	74.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020491	-	69	88.496	ENSAPOG00000019369	-	67	88.393	Acanthochromis_polyacanthus
ENSTRUG00000020491	-	54	53.933	ENSACIG00000021815	-	94	52.821	Amphilophus_citrinellus
ENSTRUG00000020491	-	69	88.496	ENSAOCG00000005289	-	67	88.393	Amphiprion_ocellaris
ENSTRUG00000020491	-	69	88.496	ENSAPEG00000004179	-	67	88.393	Amphiprion_percula
ENSTRUG00000020491	-	69	89.381	ENSATEG00000022918	hnrnpa1a	92	89.848	Anabas_testudineus
ENSTRUG00000020491	-	63	57.862	ENSATEG00000003423	-	75	57.862	Anabas_testudineus
ENSTRUG00000020491	-	70	88.210	ENSACLG00000006940	-	68	88.210	Astatotilapia_calliptera
ENSTRUG00000020491	-	55	61.582	ENSAMXG00000037730	-	63	56.808	Astyanax_mexicanus
ENSTRUG00000020491	-	56	84.153	ENSAMXG00000006296	hnrnpa1a	52	77.143	Astyanax_mexicanus
ENSTRUG00000020491	-	69	83.333	ENSCSEG00000007589	hnrnpa1a	80	80.645	Cynoglossus_semilaevis
ENSTRUG00000020491	-	64	51.892	ENSCSEG00000014051	-	76	51.613	Cynoglossus_semilaevis
ENSTRUG00000020491	-	69	87.225	ENSCVAG00000012637	hnrnpa1a	65	87.892	Cyprinodon_variegatus
ENSTRUG00000020491	-	58	55.208	ENSDORG00000026425	-	74	47.510	Dipodomys_ordii
ENSTRUG00000020491	-	69	89.062	ENSELUG00000007372	-	59	71.218	Esox_lucius
ENSTRUG00000020491	-	64	84.699	ENSGMOG00000017950	hnrnpa1a	50	84.239	Gadus_morhua
ENSTRUG00000020491	-	56	58.659	ENSGMOG00000020353	-	97	59.043	Gadus_morhua
ENSTRUG00000020491	-	54	51.685	ENSGAFG00000016803	-	63	48.585	Gambusia_affinis
ENSTRUG00000020491	-	70	88.210	ENSGAFG00000007751	-	65	89.238	Gambusia_affinis
ENSTRUG00000020491	-	72	79.508	ENSGACG00000009435	-	59	87.222	Gasterosteus_aculeatus
ENSTRUG00000020491	-	70	88.210	ENSHBUG00000005647	hnrnpa1a	69	88.210	Haplochromis_burtoni
ENSTRUG00000020491	-	58	85.000	ENSIPUG00000002023	hnrnpa1a	76	84.571	Ictalurus_punctatus
ENSTRUG00000020491	-	56	58.989	ENSIPUG00000001991	-	86	56.436	Ictalurus_punctatus
ENSTRUG00000020491	-	61	79.000	ENSIPUG00000022440	-	76	78.771	Ictalurus_punctatus
ENSTRUG00000020491	-	55	64.641	ENSJJAG00000009178	-	71	55.859	Jaculus_jaculus
ENSTRUG00000020491	-	91	81.788	ENSKMAG00000020859	-	66	88.839	Kryptolebias_marmoratus
ENSTRUG00000020491	-	69	88.106	ENSLBEG00000010010	hnrnpa1a	65	88.000	Labrus_bergylta
ENSTRUG00000020491	-	56	69.730	ENSMFAG00000028351	-	90	58.278	Macaca_fascicularis
ENSTRUG00000020491	-	69	88.938	ENSMAMG00000007606	-	65	88.889	Mastacembelus_armatus
ENSTRUG00000020491	-	70	88.210	ENSMZEG00005027173	hnrnpa1a	69	88.210	Maylandia_zebra
ENSTRUG00000020491	-	71	79.310	ENSMMOG00000008251	hnrnpa1a	90	85.000	Mola_mola
ENSTRUG00000020491	-	54	54.802	ENSMALG00000008886	-	95	52.970	Monopterus_albus
ENSTRUG00000020491	-	69	90.265	ENSMALG00000014091	hnrnpa1a	64	90.179	Monopterus_albus
ENSTRUG00000020491	-	70	88.210	ENSNBRG00000018441	-	69	88.210	Neolamprologus_brichardi
ENSTRUG00000020491	-	55	57.386	ENSNBRG00000014469	-	82	57.386	Neolamprologus_brichardi
ENSTRUG00000020491	-	63	51.445	ENSORLG00000029240	-	94	50.282	Oryzias_latipes
ENSTRUG00000020491	-	91	81.940	ENSORLG00000008001	-	68	89.778	Oryzias_latipes
ENSTRUG00000020491	-	91	81.940	ENSORLG00020006582	hnrnpa1a	96	89.423	Oryzias_latipes_hni
ENSTRUG00000020491	-	63	50.568	ENSORLG00020022498	-	89	50.282	Oryzias_latipes_hni
ENSTRUG00000020491	-	90	42.268	ENSORLG00020006043	-	59	49.425	Oryzias_latipes_hni
ENSTRUG00000020491	-	91	81.271	ENSORLG00015022294	-	68	89.333	Oryzias_latipes_hsok
ENSTRUG00000020491	-	92	79.000	ENSOMEG00000015959	-	68	89.333	Oryzias_melastigma
ENSTRUG00000020491	-	55	57.803	ENSPMGG00000016392	-	93	57.803	Periophthalmus_magnuspinnatus
ENSTRUG00000020491	-	57	89.840	ENSPMGG00000011804	hnrnpa1a	73	87.374	Periophthalmus_magnuspinnatus
ENSTRUG00000020491	-	69	88.546	ENSPFOG00000001825	-	65	89.238	Poecilia_formosa
ENSTRUG00000020491	-	69	88.546	ENSPMEG00000002425	-	65	89.238	Poecilia_mexicana
ENSTRUG00000020491	-	55	57.386	ENSPNYG00000020729	-	90	57.386	Pundamilia_nyererei
ENSTRUG00000020491	-	57	81.818	ENSPNAG00000021630	-	57	80.749	Pygocentrus_nattereri
ENSTRUG00000020491	-	55	85.000	ENSPNAG00000007752	hnrnpa1a	84	76.777	Pygocentrus_nattereri
ENSTRUG00000020491	-	65	87.678	ENSSMAG00000004641	hnrnpa1a	71	84.444	Scophthalmus_maximus
ENSTRUG00000020491	-	64	57.831	ENSSMAG00000010279	-	93	57.831	Scophthalmus_maximus
ENSTRUG00000020491	-	54	53.409	ENSSMAG00000010246	-	84	53.191	Scophthalmus_maximus
ENSTRUG00000020491	-	90	92.188	ENSSDUG00000013908	hnrnpa1a	88	89.583	Seriola_dumerili
ENSTRUG00000020491	-	55	57.803	ENSSDUG00000002431	-	82	57.803	Seriola_dumerili
ENSTRUG00000020491	-	90	92.935	ENSSLDG00000003718	hnrnpa1a	94	82.915	Seriola_lalandi_dorsalis
ENSTRUG00000020491	-	91	80.731	ENSSPAG00000018518	-	67	86.607	Stegastes_partitus
ENSTRUG00000020491	-	72	51.515	ENSTNIG00000007398	-	89	52.381	Tetraodon_nigroviridis
ENSTRUG00000020491	-	58	92.593	ENSXCOG00000009001	-	91	87.383	Xiphophorus_couchianus
ENSTRUG00000020491	-	69	88.546	ENSXMAG00000008076	-	65	89.238	Xiphophorus_maculatus