EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000020509 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 7260 bases
Position: chr16:4089842-4097101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000047861	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053165	-	6387	-	ENSTRUP00000047861	193 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000020509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000020509	-	66	31.387	ENSTRUG00000018380	rab22a	66	31.387
ENSTRUG00000020509	-	77	42.763	ENSTRUG00000020453	arl8	85	42.763
ENSTRUG00000020509	-	75	43.333	ENSTRUG00000003183	-	77	43.333
ENSTRUG00000020509	-	76	55.479	ENSTRUG00000006254	arl1	81	55.479
ENSTRUG00000020509	-	72	40.141	ENSTRUG00000003716	-	61	40.141
ENSTRUG00000020509	-	77	67.568	ENSTRUG00000007465	arf3	82	67.568
ENSTRUG00000020509	-	74	69.718	ENSTRUG00000014380	-	78	69.718
ENSTRUG00000020509	-	77	67.568	ENSTRUG00000011190	arf3	82	67.568
ENSTRUG00000020509	-	73	36.170	ENSTRUG00000013912	arl8a	75	36.170
ENSTRUG00000020509	-	73	94.286	ENSTRUG00000024749	-	100	94.286
ENSTRUG00000020509	-	72	45.652	ENSTRUG00000018668	-	69	45.652
ENSTRUG00000020509	-	60	30.400	ENSTRUG00000015590	rab5c	55	30.400
ENSTRUG00000020509	-	69	44.203	ENSTRUG00000008027	arl4aa	70	44.203
ENSTRUG00000020509	-	78	60.000	ENSTRUG00000025462	-	84	60.000
ENSTRUG00000020509	-	73	37.589	ENSTRUG00000011496	arl8bb	76	37.589
ENSTRUG00000020509	-	77	42.105	ENSTRUG00000022814	arl5c	85	42.105
ENSTRUG00000020509	-	79	40.260	ENSTRUG00000011561	arl11	89	40.260
ENSTRUG00000020509	-	73	45.806	ENSTRUG00000024375	-	77	45.806
ENSTRUG00000020509	-	72	48.921	ENSTRUG00000018107	arl3	76	48.921
ENSTRUG00000020509	-	67	36.090	ENSTRUG00000007269	sar1ab	66	36.090
ENSTRUG00000020509	-	69	33.083	ENSTRUG00000013035	-	52	33.083
ENSTRUG00000020509	-	77	66.667	ENSTRUG00000023041	-	85	66.667
ENSTRUG00000020509	-	67	36.842	ENSTRUG00000023908	sar1b	66	36.842
ENSTRUG00000020509	-	74	70.423	ENSTRUG00000019870	-	79	70.423
ENSTRUG00000020509	-	72	49.640	ENSTRUG00000005435	arl2	75	49.640
ENSTRUG00000020509	-	75	42.069	ENSTRUG00000014614	arl5a	81	42.069
ENSTRUG00000020509	-	73	36.170	ENSTRUG00000023169	arl8ba	76	36.170
ENSTRUG00000020509	-	81	53.416	ENSTRUG00000025171	-	99	53.416
ENSTRUG00000020509	-	75	43.624	ENSTRUG00000003085	arl4cb	78	43.624
ENSTRUG00000020509	-	72	40.845	ENSTRUG00000017239	ARL6	77	40.845
ENSTRUG00000020509	-	74	32.394	ENSTRUG00000003641	arl13b	53	32.394
ENSTRUG00000020509	-	61	31.008	ENSTRUG00000024368	rab5aa	57	31.008
ENSTRUG00000020509	-	76	48.649	ENSTRUG00000004035	arl3l2	79	48.649
ENSTRUG00000020509	-	67	32.847	ENSTRUG00000009319	arfrp1	68	32.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020509	-	82	90.566	ENSATEG00000000391	-	98	90.566	Anabas_testudineus
ENSTRUG00000020509	-	77	95.973	ENSACLG00000022869	-	94	95.973	Astatotilapia_calliptera
ENSTRUG00000020509	-	72	95.683	ENSELUG00000000436	-	87	95.683	Esox_lucius
ENSTRUG00000020509	-	77	95.973	ENSIPUG00000020344	-	93	95.973	Ictalurus_punctatus
ENSTRUG00000020509	-	77	95.946	ENSONIG00000000864	-	94	95.946	Oreochromis_niloticus
ENSTRUG00000020509	-	72	94.964	ENSORLG00015004028	-	89	94.964	Oryzias_latipes_hsok
ENSTRUG00000020509	-	77	95.946	ENSOMEG00000022678	-	91	95.946	Oryzias_melastigma
ENSTRUG00000020509	-	80	87.662	ENSPLAG00000007217	-	100	87.662	Poecilia_latipinna
ENSTRUG00000020509	-	70	91.176	ENSPMEG00000017081	-	86	91.176	Poecilia_mexicana
ENSTRUG00000020509	-	72	95.652	ENSXMAG00000028437	-	91	95.652	Xiphophorus_maculatus