EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000020530 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC101063147
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3356 bases
Position: chr14:5338223-5341578
Accession: 101063147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000050215	Sua5_yciO_yrdC	PF01300.18	1.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049219	-	2541	XM_003970489	ENSTRUP00000050215	847 (aa)	XP_003970538	-

Gene Model

Click here to download ENSTRUG00000020530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000020530	si:ch211-153b23.3	57	33.270	ENSTRUG00000003247	si:ch211-153b23.4	64	33.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020530	si:ch211-153b23.3	59	32.696	ENSACIG00000006997	si:ch211-153b23.4	60	32.696	Amphilophus_citrinellus
ENSTRUG00000020530	si:ch211-153b23.3	100	69.620	ENSACIG00000006968	si:ch211-153b23.3	99	69.620	Amphilophus_citrinellus
ENSTRUG00000020530	si:ch211-153b23.3	100	78.833	ENSAOCG00000010974	si:ch211-153b23.3	99	78.375	Amphiprion_ocellaris
ENSTRUG00000020530	si:ch211-153b23.3	100	78.833	ENSAPEG00000014700	si:ch211-153b23.3	99	78.375	Amphiprion_percula
ENSTRUG00000020530	si:ch211-153b23.3	57	32.024	ENSAPEG00000014665	si:ch211-153b23.4	61	32.024	Amphiprion_percula
ENSTRUG00000020530	si:ch211-153b23.3	57	32.887	ENSATEG00000004948	si:ch211-153b23.4	59	32.887	Anabas_testudineus
ENSTRUG00000020530	si:ch211-153b23.3	100	77.854	ENSATEG00000004956	si:ch211-153b23.3	99	77.397	Anabas_testudineus
ENSTRUG00000020530	si:ch211-153b23.3	100	75.744	ENSACLG00000005894	si:ch211-153b23.3	99	75.286	Astatotilapia_calliptera
ENSTRUG00000020530	si:ch211-153b23.3	57	34.286	ENSACLG00000005471	si:ch211-153b23.4	59	34.286	Astatotilapia_calliptera
ENSTRUG00000020530	si:ch211-153b23.3	100	69.319	ENSAMXG00000038564	si:ch211-153b23.3	99	69.319	Astyanax_mexicanus
ENSTRUG00000020530	si:ch211-153b23.3	99	74.714	ENSCSEG00000014853	si:ch211-153b23.3	99	74.371	Cynoglossus_semilaevis
ENSTRUG00000020530	si:ch211-153b23.3	100	76.376	ENSCVAG00000021124	si:ch211-153b23.3	99	76.147	Cyprinodon_variegatus
ENSTRUG00000020530	si:ch211-153b23.3	75	30.197	ENSCVAG00000021145	si:ch211-153b23.4	64	32.375	Cyprinodon_variegatus
ENSTRUG00000020530	si:ch211-153b23.3	100	69.704	ENSDARG00000104919	si:ch211-153b23.3	99	69.134	Danio_rerio
ENSTRUG00000020530	si:ch211-153b23.3	87	83.478	ENSELUG00000004912	si:ch211-153b23.3	98	83.478	Esox_lucius
ENSTRUG00000020530	si:ch211-153b23.3	57	34.034	ENSFALG00000011343	-	59	33.908	Ficedula_albicollis
ENSTRUG00000020530	si:ch211-153b23.3	77	30.713	ENSFHEG00000010001	si:ch211-153b23.4	83	30.277	Fundulus_heteroclitus
ENSTRUG00000020530	si:ch211-153b23.3	100	76.606	ENSFHEG00000010030	si:ch211-153b23.3	99	76.032	Fundulus_heteroclitus
ENSTRUG00000020530	si:ch211-153b23.3	100	76.060	ENSGAFG00000007455	si:ch211-153b23.3	99	75.830	Gambusia_affinis
ENSTRUG00000020530	si:ch211-153b23.3	59	33.966	ENSGACG00000018253	si:ch211-153b23.4	60	33.966	Gasterosteus_aculeatus
ENSTRUG00000020530	si:ch211-153b23.3	57	31.094	ENSGAGG00000024601	-	69	31.094	Gopherus_agassizii
ENSTRUG00000020530	si:ch211-153b23.3	53	33.806	ENSHBUG00000000013	si:ch211-153b23.4	65	33.806	Haplochromis_burtoni
ENSTRUG00000020530	si:ch211-153b23.3	100	75.858	ENSHBUG00000001760	si:ch211-153b23.3	99	75.400	Haplochromis_burtoni
ENSTRUG00000020530	si:ch211-153b23.3	100	69.803	ENSIPUG00000015213	si:ch211-153b23.3	99	69.454	Ictalurus_punctatus
ENSTRUG00000020530	si:ch211-153b23.3	58	32.563	ENSKMAG00000006829	si:ch211-153b23.4	62	32.115	Kryptolebias_marmoratus
ENSTRUG00000020530	si:ch211-153b23.3	58	32.821	ENSKMAG00000006919	-	58	32.375	Kryptolebias_marmoratus
ENSTRUG00000020530	si:ch211-153b23.3	100	75.803	ENSKMAG00000006792	si:ch211-153b23.3	99	75.459	Kryptolebias_marmoratus
ENSTRUG00000020530	si:ch211-153b23.3	99	79.287	ENSLBEG00000026324	si:ch211-153b23.3	99	79.287	Labrus_bergylta
ENSTRUG00000020530	si:ch211-153b23.3	95	55.702	ENSLACG00000005800	-	99	54.621	Latimeria_chalumnae
ENSTRUG00000020530	si:ch211-153b23.3	83	48.318	ENSLOCG00000015063	si:ch211-153b23.3	98	57.447	Lepisosteus_oculatus
ENSTRUG00000020530	si:ch211-153b23.3	59	32.184	ENSMAMG00000009277	si:ch211-153b23.4	62	32.184	Mastacembelus_armatus
ENSTRUG00000020530	si:ch211-153b23.3	100	78.375	ENSMAMG00000009328	si:ch211-153b23.3	99	78.375	Mastacembelus_armatus
ENSTRUG00000020530	si:ch211-153b23.3	59	31.923	ENSMAMG00000009358	si:ch211-153b23.4	63	31.923	Mastacembelus_armatus
ENSTRUG00000020530	si:ch211-153b23.3	100	75.744	ENSMZEG00005011450	si:ch211-153b23.3	99	75.286	Maylandia_zebra
ENSTRUG00000020530	si:ch211-153b23.3	57	34.095	ENSMZEG00005011433	si:ch211-153b23.4	63	34.095	Maylandia_zebra
ENSTRUG00000020530	si:ch211-153b23.3	66	57.641	ENSMGAG00000005489	-	99	56.836	Meleagris_gallopavo
ENSTRUG00000020530	si:ch211-153b23.3	57	33.207	ENSMGAG00000005478	-	63	33.017	Meleagris_gallopavo
ENSTRUG00000020530	si:ch211-153b23.3	100	80.849	ENSMMOG00000004436	si:ch211-153b23.3	99	80.161	Mola_mola
ENSTRUG00000020530	si:ch211-153b23.3	57	34.160	ENSNBRG00000013392	si:ch211-153b23.4	65	34.160	Neolamprologus_brichardi
ENSTRUG00000020530	si:ch211-153b23.3	100	75.973	ENSNBRG00000013370	si:ch211-153b23.3	99	75.515	Neolamprologus_brichardi
ENSTRUG00000020530	si:ch211-153b23.3	57	34.095	ENSONIG00000017875	si:ch211-153b23.4	59	34.095	Oreochromis_niloticus
ENSTRUG00000020530	si:ch211-153b23.3	100	74.885	ENSORLG00000006161	si:ch211-153b23.3	99	74.427	Oryzias_latipes
ENSTRUG00000020530	si:ch211-153b23.3	97	75.685	ENSORLG00020000910	si:ch211-153b23.3	99	75.209	Oryzias_latipes_hni
ENSTRUG00000020530	si:ch211-153b23.3	97	74.911	ENSORLG00015003698	si:ch211-153b23.3	99	74.435	Oryzias_latipes_hsok
ENSTRUG00000020530	si:ch211-153b23.3	100	75.229	ENSOMEG00000007661	si:ch211-153b23.3	99	74.771	Oryzias_melastigma
ENSTRUG00000020530	si:ch211-153b23.3	50	36.180	ENSPKIG00000014429	si:ch211-153b23.4	53	36.180	Paramormyrops_kingsleyae
ENSTRUG00000020530	si:ch211-153b23.3	100	51.342	ENSPKIG00000021029	-	99	51.119	Paramormyrops_kingsleyae
ENSTRUG00000020530	si:ch211-153b23.3	97	70.379	ENSPKIG00000022450	si:ch211-153b23.3	99	69.787	Paramormyrops_kingsleyae
ENSTRUG00000020530	si:ch211-153b23.3	91	81.633	ENSPMGG00000001311	si:ch211-153b23.3	100	81.633	Periophthalmus_magnuspinnatus
ENSTRUG00000020530	si:ch211-153b23.3	100	76.705	ENSPFOG00000012289	si:ch211-153b23.3	99	76.364	Poecilia_formosa
ENSTRUG00000020530	si:ch211-153b23.3	77	30.000	ENSPLAG00000016295	si:ch211-153b23.4	53	34.651	Poecilia_latipinna
ENSTRUG00000020530	si:ch211-153b23.3	99	77.064	ENSPLAG00000016320	si:ch211-153b23.3	99	76.720	Poecilia_latipinna
ENSTRUG00000020530	si:ch211-153b23.3	100	77.549	ENSPMEG00000008884	si:ch211-153b23.3	99	77.205	Poecilia_mexicana
ENSTRUG00000020530	si:ch211-153b23.3	100	75.629	ENSPNYG00000000251	si:ch211-153b23.3	99	75.172	Pundamilia_nyererei
ENSTRUG00000020530	si:ch211-153b23.3	57	34.095	ENSPNYG00000000250	si:ch211-153b23.4	63	34.095	Pundamilia_nyererei
ENSTRUG00000020530	si:ch211-153b23.3	59	34.275	ENSPNAG00000019554	si:ch211-153b23.4	58	34.275	Pygocentrus_nattereri
ENSTRUG00000020530	si:ch211-153b23.3	100	70.986	ENSPNAG00000019592	si:ch211-153b23.3	99	70.298	Pygocentrus_nattereri
ENSTRUG00000020530	si:ch211-153b23.3	99	70.905	ENSSFOG00015010910	si:ch211-153b23.3	99	70.332	Scleropages_formosus
ENSTRUG00000020530	si:ch211-153b23.3	57	33.988	ENSSFOG00015010891	si:ch211-153b23.4	58	33.988	Scleropages_formosus
ENSTRUG00000020530	si:ch211-153b23.3	69	50.081	ENSSFOG00015009030	-	96	50.081	Scleropages_formosus
ENSTRUG00000020530	si:ch211-153b23.3	99	78.670	ENSSMAG00000005446	si:ch211-153b23.3	99	78.211	Scophthalmus_maximus
ENSTRUG00000020530	si:ch211-153b23.3	59	32.700	ENSSDUG00000006671	si:ch211-153b23.4	63	32.890	Seriola_dumerili
ENSTRUG00000020530	si:ch211-153b23.3	100	78.107	ENSSLDG00000008629	si:ch211-153b23.3	99	78.107	Seriola_lalandi_dorsalis
ENSTRUG00000020530	si:ch211-153b23.3	57	33.397	ENSTGUG00000005499	-	63	32.827	Taeniopygia_guttata
ENSTRUG00000020530	si:ch211-153b23.3	57	31.549	ENSTNIG00000008958	si:ch211-153b23.4	63	30.975	Tetraodon_nigroviridis
ENSTRUG00000020530	si:ch211-153b23.3	100	80.513	ENSTNIG00000008962	si:ch211-153b23.3	99	80.047	Tetraodon_nigroviridis
ENSTRUG00000020530	si:ch211-153b23.3	59	34.100	ENSXETG00000004489	-	57	34.100	Xenopus_tropicalis
ENSTRUG00000020530	si:ch211-153b23.3	59	33.902	ENSXMAG00000021388	si:ch211-153b23.4	61	33.333	Xiphophorus_maculatus
ENSTRUG00000020530	si:ch211-153b23.3	100	77.341	ENSXMAG00000029318	si:ch211-153b23.3	99	76.994	Xiphophorus_maculatus