EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000020901 (Gene tree)
Gene ID: 101073295
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5956 bases
Position: chr8:10353961-10359916
Accession: 101073295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000026818	RRM_5	PF13893.6	2.8e-12	1	2
ENSTRUP00000026818	RRM_5	PF13893.6	2.8e-12	2	2
ENSTRUP00000049906	RRM_5	PF13893.6	2.8e-12	1	2
ENSTRUP00000049906	RRM_5	PF13893.6	2.8e-12	2	2
ENSTRUP00000026818	RRM_1	PF00076.22	2.8e-28	1	2
ENSTRUP00000026818	RRM_1	PF00076.22	2.8e-28	2	2
ENSTRUP00000049906	RRM_1	PF00076.22	2.8e-28	1	2
ENSTRUP00000049906	RRM_1	PF00076.22	2.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000026926	-	3468	XM_003966784	ENSTRUP00000026818	347 (aa)	XP_003966833	H2TQ61
ENSTRUT00000055992	-	5431	-	ENSTRUP00000049906	347 (aa)	-	UPI00016E4D69

Gene Model

Click here to download ENSTRUG00000020901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000020901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000020901	rbm4.3	100	38.837	ENSTRUG00000013334	rbm4.1	66	54.000
ENSTRUG00000020901	rbm4.3	97	63.235	ENSTRUG00000023874	rbm4.3	99	64.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000020901	rbm4.3	97	67.059	ENSAPOG00000002991	rbm4.3	98	65.607	Acanthochromis_polyacanthus
ENSTRUG00000020901	rbm4.3	100	85.714	ENSAPOG00000002953	rbm4.3	100	86.000	Acanthochromis_polyacanthus
ENSTRUG00000020901	rbm4.3	97	67.656	ENSACIG00000021295	rbm4.3	98	67.442	Amphilophus_citrinellus
ENSTRUG00000020901	rbm4.3	100	81.948	ENSACIG00000021311	-	100	83.381	Amphilophus_citrinellus
ENSTRUG00000020901	rbm4.3	100	87.069	ENSAOCG00000008015	rbm4.3	100	87.069	Amphiprion_ocellaris
ENSTRUG00000020901	rbm4.3	97	67.257	ENSAOCG00000007992	rbm4.3	98	66.185	Amphiprion_ocellaris
ENSTRUG00000020901	rbm4.3	97	67.552	ENSAPEG00000017288	rbm4.3	98	66.185	Amphiprion_percula
ENSTRUG00000020901	rbm4.3	100	86.494	ENSAPEG00000017324	rbm4.3	100	85.345	Amphiprion_percula
ENSTRUG00000020901	rbm4.3	97	67.656	ENSATEG00000019395	rbm4.3	99	68.661	Anabas_testudineus
ENSTRUG00000020901	rbm4.3	100	86.207	ENSATEG00000019375	rbm4.3	100	87.356	Anabas_testudineus
ENSTRUG00000020901	rbm4.3	100	82.808	ENSACLG00000010620	-	100	84.241	Astatotilapia_calliptera
ENSTRUG00000020901	rbm4.3	97	67.751	ENSACLG00000010642	rbm4.3	97	67.151	Astatotilapia_calliptera
ENSTRUG00000020901	rbm4.3	61	73.709	ENSAMXG00000040224	rbm4.3	82	73.786	Astyanax_mexicanus
ENSTRUG00000020901	rbm4.3	100	80.286	ENSCSEG00000013659	rbm4.3	100	80.286	Cynoglossus_semilaevis
ENSTRUG00000020901	rbm4.3	99	64.451	ENSCVAG00000008502	rbm4.3	99	64.571	Cyprinodon_variegatus
ENSTRUG00000020901	rbm4.3	100	72.521	ENSCVAG00000008508	rbm4.3	100	74.221	Cyprinodon_variegatus
ENSTRUG00000020901	rbm4.3	95	69.822	ENSDARG00000022129	rbm4.3	99	68.946	Danio_rerio
ENSTRUG00000020901	rbm4.3	99	72.650	ENSELUG00000022150	rbm4.3	99	72.365	Esox_lucius
ENSTRUG00000020901	rbm4.3	99	74.857	ENSELUG00000022155	rbm4.3	99	74.857	Esox_lucius
ENSTRUG00000020901	rbm4.3	100	68.451	ENSELUG00000022168	rbm4.3	100	68.644	Esox_lucius
ENSTRUG00000020901	rbm4.3	99	63.248	ENSFHEG00000023096	rbm4.3	99	62.323	Fundulus_heteroclitus
ENSTRUG00000020901	rbm4.3	81	76.512	ENSFHEG00000023137	rbm4.3	84	79.412	Fundulus_heteroclitus
ENSTRUG00000020901	rbm4.3	65	67.699	ENSGMOG00000004032	rbm4.3	56	70.312	Gadus_morhua
ENSTRUG00000020901	rbm4.3	100	60.795	ENSGAFG00000001935	rbm4.3	100	61.127	Gambusia_affinis
ENSTRUG00000020901	rbm4.3	91	76.119	ENSGACG00000019980	rbm4.3	99	64.607	Gasterosteus_aculeatus
ENSTRUG00000020901	rbm4.3	97	68.343	ENSHBUG00000009051	rbm4.3	97	67.733	Haplochromis_burtoni
ENSTRUG00000020901	rbm4.3	100	82.808	ENSHBUG00000009020	-	100	84.241	Haplochromis_burtoni
ENSTRUG00000020901	rbm4.3	95	74.850	ENSHCOG00000010349	rbm4.3	100	74.716	Hippocampus_comes
ENSTRUG00000020901	rbm4.3	100	67.705	ENSIPUG00000022943	RBM4B	100	68.555	Ictalurus_punctatus
ENSTRUG00000020901	rbm4.3	100	71.591	ENSKMAG00000017468	rbm4.3	100	68.750	Kryptolebias_marmoratus
ENSTRUG00000020901	rbm4.3	97	60.534	ENSKMAG00000014541	rbm4.3	99	61.838	Kryptolebias_marmoratus
ENSTRUG00000020901	rbm4.3	54	71.958	ENSLBEG00000001025	rbm4.3	85	71.958	Labrus_bergylta
ENSTRUG00000020901	rbm4.3	100	84.814	ENSLBEG00000001071	-	100	86.533	Labrus_bergylta
ENSTRUG00000020901	rbm4.3	95	61.219	ENSLOCG00000002755	rbm4.3	100	60.582	Lepisosteus_oculatus
ENSTRUG00000020901	rbm4.3	100	86.782	ENSMAMG00000004715	-	84	87.931	Mastacembelus_armatus
ENSTRUG00000020901	rbm4.3	97	65.875	ENSMAMG00000004701	rbm4.3	99	67.143	Mastacembelus_armatus
ENSTRUG00000020901	rbm4.3	97	67.751	ENSMZEG00005028540	rbm4.3	97	67.151	Maylandia_zebra
ENSTRUG00000020901	rbm4.3	86	68.792	ENSMZEG00005007441	rbm4.3	79	67.340	Maylandia_zebra
ENSTRUG00000020901	rbm4.3	100	78.797	ENSMZEG00005007417	-	100	80.229	Maylandia_zebra
ENSTRUG00000020901	rbm4.3	85	79.125	ENSMZEG00005028537	-	83	79.461	Maylandia_zebra
ENSTRUG00000020901	rbm4.3	97	64.223	ENSMMOG00000012191	rbm4.3	99	62.784	Mola_mola
ENSTRUG00000020901	rbm4.3	91	64.557	ENSMALG00000003032	rbm4.3	95	62.776	Monopterus_albus
ENSTRUG00000020901	rbm4.3	85	86.195	ENSMALG00000003001	rbm4.3	87	86.824	Monopterus_albus
ENSTRUG00000020901	rbm4.3	97	64.583	ENSMALG00000015014	-	98	63.557	Monopterus_albus
ENSTRUG00000020901	rbm4.3	97	67.456	ENSNBRG00000012372	rbm4.3	97	66.860	Neolamprologus_brichardi
ENSTRUG00000020901	rbm4.3	97	66.862	ENSONIG00000018378	rbm4.3	97	66.571	Oreochromis_niloticus
ENSTRUG00000020901	rbm4.3	100	82.808	ENSONIG00000018380	-	100	84.241	Oreochromis_niloticus
ENSTRUG00000020901	rbm4.3	96	60.534	ENSORLG00000024749	rbm4.3	97	55.780	Oryzias_latipes
ENSTRUG00000020901	rbm4.3	100	74.373	ENSORLG00000012473	rbm4.3	100	73.816	Oryzias_latipes
ENSTRUG00000020901	rbm4.3	100	76.816	ENSORLG00000011589	rbm4.3	100	75.978	Oryzias_latipes
ENSTRUG00000020901	rbm4.3	100	76.536	ENSORLG00020012474	rbm4.3	100	75.698	Oryzias_latipes_hni
ENSTRUG00000020901	rbm4.3	100	74.373	ENSORLG00020012464	rbm4.3	100	73.816	Oryzias_latipes_hni
ENSTRUG00000020901	rbm4.3	99	61.032	ENSORLG00020012482	rbm4.3	99	56.286	Oryzias_latipes_hni
ENSTRUG00000020901	rbm4.3	96	61.012	ENSORLG00015013721	rbm4.3	99	55.840	Oryzias_latipes_hsok
ENSTRUG00000020901	rbm4.3	100	73.816	ENSORLG00015013686	rbm4.3	100	73.259	Oryzias_latipes_hsok
ENSTRUG00000020901	rbm4.3	100	76.257	ENSORLG00015013698	rbm4.3	100	75.419	Oryzias_latipes_hsok
ENSTRUG00000020901	rbm4.3	97	75.793	ENSOMEG00000005929	rbm4.3	100	74.930	Oryzias_melastigma
ENSTRUG00000020901	rbm4.3	96	61.493	ENSOMEG00000005950	rbm4.3	98	62.029	Oryzias_melastigma
ENSTRUG00000020901	rbm4.3	100	74.581	ENSOMEG00000005918	rbm4.3	100	73.464	Oryzias_melastigma
ENSTRUG00000020901	rbm4.3	94	69.369	ENSPKIG00000007001	rbm4.3	100	68.661	Paramormyrops_kingsleyae
ENSTRUG00000020901	rbm4.3	100	73.938	ENSPLAG00000006131	rbm4.3	100	75.637	Poecilia_latipinna
ENSTRUG00000020901	rbm4.3	99	62.500	ENSPLAG00000006077	rbm4.3	99	61.972	Poecilia_latipinna
ENSTRUG00000020901	rbm4.3	100	73.654	ENSPMEG00000024271	rbm4.3	100	75.354	Poecilia_mexicana
ENSTRUG00000020901	rbm4.3	99	62.393	ENSPMEG00000024260	rbm4.3	99	62.712	Poecilia_mexicana
ENSTRUG00000020901	rbm4.3	100	71.671	ENSPMEG00000024263	rbm4.3	100	75.637	Poecilia_mexicana
ENSTRUG00000020901	rbm4.3	100	70.774	ENSPREG00000002156	rbm4.3	100	72.779	Poecilia_reticulata
ENSTRUG00000020901	rbm4.3	99	63.944	ENSPREG00000002093	-	99	63.842	Poecilia_reticulata
ENSTRUG00000020901	rbm4.3	97	67.456	ENSPNYG00000018564	rbm4.3	97	67.151	Pundamilia_nyererei
ENSTRUG00000020901	rbm4.3	100	82.808	ENSPNYG00000018541	rbm4.3	100	84.241	Pundamilia_nyererei
ENSTRUG00000020901	rbm4.3	100	67.769	ENSPNAG00000013053	rbm4.3	100	68.056	Pygocentrus_nattereri
ENSTRUG00000020901	rbm4.3	100	67.218	ENSSFOG00015015563	rbm4.3	100	67.218	Scleropages_formosus
ENSTRUG00000020901	rbm4.3	97	66.864	ENSSMAG00000013653	rbm4.3	98	67.246	Scophthalmus_maximus
ENSTRUG00000020901	rbm4.3	100	84.770	ENSSMAG00000013644	rbm4.3	100	84.770	Scophthalmus_maximus
ENSTRUG00000020901	rbm4.3	100	85.057	ENSSDUG00000018435	rbm4.3	100	86.207	Seriola_dumerili
ENSTRUG00000020901	rbm4.3	97	66.372	ENSSDUG00000018422	rbm4.3	98	67.630	Seriola_dumerili
ENSTRUG00000020901	rbm4.3	97	65.680	ENSSLDG00000017182	rbm4.3	98	66.859	Seriola_lalandi_dorsalis
ENSTRUG00000020901	rbm4.3	100	85.057	ENSSLDG00000017204	rbm4.3	100	86.207	Seriola_lalandi_dorsalis
ENSTRUG00000020901	rbm4.3	100	86.207	ENSSPAG00000008062	rbm4.3	100	86.207	Stegastes_partitus
ENSTRUG00000020901	rbm4.3	96	64.583	ENSSPAG00000008041	rbm4.3	85	62.393	Stegastes_partitus
ENSTRUG00000020901	rbm4.3	100	92.795	ENSTNIG00000005668	rbm4.3	100	92.795	Tetraodon_nigroviridis
ENSTRUG00000020901	rbm4.3	97	63.529	ENSXCOG00000005996	rbm4.3	100	63.944	Xiphophorus_couchianus
ENSTRUG00000020901	rbm4.3	100	73.371	ENSXCOG00000006001	rbm4.3	100	75.071	Xiphophorus_couchianus
ENSTRUG00000020901	rbm4.3	100	73.371	ENSXMAG00000021997	rbm4.3	100	75.071	Xiphophorus_maculatus
ENSTRUG00000020901	rbm4.3	97	63.158	ENSXMAG00000025173	rbm4.3	99	63.739	Xiphophorus_maculatus
ENSTRUG00000020901	rbm4.3	100	73.938	ENSXMAG00000011698	rbm4.3	100	75.637	Xiphophorus_maculatus