EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000021248 (Gene tree)
Gene ID: 101079157
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 177423 bases
Position: chr15:8533531-8710953
Accession: 101079157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053778	RRM_1	PF00076.22	3.2e-33	1	2
ENSTRUP00000053778	RRM_1	PF00076.22	3.2e-33	2	2
ENSTRUP00000029602	RRM_1	PF00076.22	3e-29	1	2
ENSTRUP00000029602	RRM_1	PF00076.22	3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000029719	-	1008	XM_011611480	ENSTRUP00000029602	335 (aa)	XP_011609782	H2TY43
ENSTRUT00000049237	-	4470	XM_003971097	ENSTRUP00000053778	415 (aa)	XP_003971146	UPI0005D192A6

Gene Model

Click here to download ENSTRUG00000021248's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000021248	msi2a	77	65.138	ENSTRUG00000016249	MSI1	100	60.630
ENSTRUG00000021248	msi2a	50	37.805	ENSTRUG00000017504	hnrnpa3	93	33.333
ENSTRUG00000021248	msi2a	57	42.632	ENSTRUG00000025954	hnrnpaba	68	43.049
ENSTRUG00000021248	msi2a	89	70.432	ENSTRUG00000015636	-	74	78.774
ENSTRUG00000021248	msi2a	57	40.104	ENSTRUG00000018450	hnrnpd	78	40.316
ENSTRUG00000021248	msi2a	54	53.333	ENSTRUG00000021586	-	99	66.327
ENSTRUG00000021248	msi2a	50	36.905	ENSTRUG00000020491	-	59	38.919
ENSTRUG00000021248	msi2a	62	39.234	ENSTRUG00000008411	-	83	35.632
ENSTRUG00000021248	msi2a	50	37.107	ENSTRUG00000015362	hnrnpa0b	68	34.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021248	msi2a	100	86.866	ENSG00000153944	MSI2	100	87.179	Homo_sapiens
ENSTRUG00000021248	msi2a	95	98.477	ENSAPOG00000001658	msi2a	97	98.477	Acanthochromis_polyacanthus
ENSTRUG00000021248	msi2a	88	87.179	ENSAMEG00000002697	MSI2	99	87.179	Ailuropoda_melanoleuca
ENSTRUG00000021248	msi2a	95	88.693	ENSACIG00000009475	msi2a	97	88.693	Amphilophus_citrinellus
ENSTRUG00000021248	msi2a	59	78.344	ENSAOCG00000014822	msi2a	69	82.000	Amphiprion_ocellaris
ENSTRUG00000021248	msi2a	100	91.642	ENSAPEG00000007706	msi2a	100	91.642	Amphiprion_percula
ENSTRUG00000021248	msi2a	96	97.985	ENSATEG00000010498	msi2a	97	98.477	Anabas_testudineus
ENSTRUG00000021248	msi2a	88	91.727	ENSATEG00000003301	-	100	91.727	Anabas_testudineus
ENSTRUG00000021248	msi2a	83	93.478	ENSACAG00000005452	MSI2	78	83.333	Anolis_carolinensis
ENSTRUG00000021248	msi2a	100	86.866	ENSANAG00000037827	MSI2	100	86.866	Aotus_nancymaae
ENSTRUG00000021248	msi2a	95	98.477	ENSACLG00000007752	msi2a	97	98.477	Astatotilapia_calliptera
ENSTRUG00000021248	msi2a	100	88.095	ENSAMXG00000032796	msi2a	93	96.414	Astyanax_mexicanus
ENSTRUG00000021248	msi2a	100	87.463	ENSAMXG00000010474	msi2b	97	93.878	Astyanax_mexicanus
ENSTRUG00000021248	msi2a	88	92.177	ENSBTAG00000004406	MSI2	97	92.177	Bos_taurus
ENSTRUG00000021248	msi2a	68	54.733	WBGene00003423	msi-1	73	60.776	Caenorhabditis_elegans
ENSTRUG00000021248	msi2a	100	86.866	ENSCJAG00000013998	MSI2	100	86.866	Callithrix_jacchus
ENSTRUG00000021248	msi2a	87	87.055	ENSCAFG00020025620	MSI2	81	86.984	Canis_lupus_dingo
ENSTRUG00000021248	msi2a	100	85.970	ENSCHIG00000016580	MSI2	100	85.970	Capra_hircus
ENSTRUG00000021248	msi2a	88	87.589	ENSCPOG00000034042	MSI2	99	87.589	Cavia_porcellus
ENSTRUG00000021248	msi2a	100	86.866	ENSCCAG00000033927	MSI2	100	86.866	Cebus_capucinus
ENSTRUG00000021248	msi2a	97	87.346	ENSCATG00000040879	MSI2	100	86.567	Cercocebus_atys
ENSTRUG00000021248	msi2a	100	82.436	ENSCLAG00000014325	MSI2	100	82.436	Chinchilla_lanigera
ENSTRUG00000021248	msi2a	100	86.866	ENSCSAG00000005633	MSI2	100	86.866	Chlorocebus_sabaeus
ENSTRUG00000021248	msi2a	83	65.591	ENSCHOG00000008660	MSI2	83	84.314	Choloepus_hoffmanni
ENSTRUG00000021248	msi2a	100	84.848	ENSCPBG00000009942	MSI2	95	85.768	Chrysemys_picta_bellii
ENSTRUG00000021248	msi2a	82	53.883	ENSCING00000018579	-	90	52.632	Ciona_intestinalis
ENSTRUG00000021248	msi2a	54	66.839	ENSCSAVG00000010397	-	67	68.421	Ciona_savignyi
ENSTRUG00000021248	msi2a	88	91.556	ENSCANG00000036414	MSI2	100	87.179	Colobus_angolensis_palliatus
ENSTRUG00000021248	msi2a	100	86.310	ENSCGRG00001013330	Msi2	100	86.310	Cricetulus_griseus_chok1gshd
ENSTRUG00000021248	msi2a	88	86.901	ENSCGRG00000003141	Msi2	100	86.901	Cricetulus_griseus_crigri
ENSTRUG00000021248	msi2a	76	78.866	ENSCSEG00000013557	msi2a	83	77.835	Cynoglossus_semilaevis
ENSTRUG00000021248	msi2a	100	78.932	ENSCSEG00000003266	-	100	78.932	Cynoglossus_semilaevis
ENSTRUG00000021248	msi2a	71	70.157	ENSCSEG00000013549	msi2a	100	78.804	Cynoglossus_semilaevis
ENSTRUG00000021248	msi2a	95	93.401	ENSCVAG00000017075	msi2a	96	94.656	Cyprinodon_variegatus
ENSTRUG00000021248	msi2a	95	92.893	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSTRUG00000021248	msi2a	95	84.987	ENSDARG00000033901	msi2a	96	83.715	Danio_rerio
ENSTRUG00000021248	msi2a	88	92.361	ENSDNOG00000014501	MSI2	100	92.361	Dasypus_novemcinctus
ENSTRUG00000021248	msi2a	76	80.711	ENSDORG00000005394	Msi2	84	80.711	Dipodomys_ordii
ENSTRUG00000021248	msi2a	95	51.676	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSTRUG00000021248	msi2a	62	73.026	ENSETEG00000012450	-	64	73.026	Echinops_telfairi
ENSTRUG00000021248	msi2a	86	63.666	ENSEBUG00000006732	msi2a	87	63.666	Eptatretus_burgeri
ENSTRUG00000021248	msi2a	87	89.632	ENSEASG00005002965	MSI2	97	80.415	Equus_asinus_asinus
ENSTRUG00000021248	msi2a	100	80.332	ENSECAG00000011435	MSI2	100	80.332	Equus_caballus
ENSTRUG00000021248	msi2a	80	76.680	ENSEEUG00000007810	MSI2	100	76.680	Erinaceus_europaeus
ENSTRUG00000021248	msi2a	96	86.139	ENSELUG00000001361	msi2b	100	82.073	Esox_lucius
ENSTRUG00000021248	msi2a	100	88.060	ENSELUG00000011747	msi2a	100	88.060	Esox_lucius
ENSTRUG00000021248	msi2a	100	86.866	ENSFCAG00000041686	MSI2	100	86.866	Felis_catus
ENSTRUG00000021248	msi2a	51	64.762	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSTRUG00000021248	msi2a	88	87.179	ENSFDAG00000016118	MSI2	100	87.179	Fukomys_damarensis
ENSTRUG00000021248	msi2a	95	98.477	ENSFHEG00000000084	msi2a	97	98.477	Fundulus_heteroclitus
ENSTRUG00000021248	msi2a	56	81.081	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSTRUG00000021248	msi2a	100	81.586	ENSGALG00000005567	MSI2	100	81.586	Gallus_gallus
ENSTRUG00000021248	msi2a	96	83.180	ENSGAFG00000006974	msi2a	90	100.000	Gambusia_affinis
ENSTRUG00000021248	msi2a	100	86.716	ENSGAGG00000016542	MSI2	100	84.211	Gopherus_agassizii
ENSTRUG00000021248	msi2a	88	91.556	ENSGGOG00000013182	MSI2	100	87.179	Gorilla_gorilla
ENSTRUG00000021248	msi2a	95	98.477	ENSHBUG00000020800	msi2a	97	98.477	Haplochromis_burtoni
ENSTRUG00000021248	msi2a	100	73.654	ENSHGLG00000012444	MSI2	100	73.654	Heterocephalus_glaber_female
ENSTRUG00000021248	msi2a	73	83.092	ENSHGLG00100003744	MSI2	100	83.092	Heterocephalus_glaber_male
ENSTRUG00000021248	msi2a	95	79.336	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSTRUG00000021248	msi2a	96	96.725	ENSHCOG00000000266	msi2a	97	97.208	Hippocampus_comes
ENSTRUG00000021248	msi2a	96	90.176	ENSIPUG00000021097	msi2a	95	95.062	Ictalurus_punctatus
ENSTRUG00000021248	msi2a	96	88.162	ENSIPUG00000003732	msi2b	90	96.016	Ictalurus_punctatus
ENSTRUG00000021248	msi2a	88	87.589	ENSSTOG00000007884	MSI2	99	87.589	Ictidomys_tridecemlineatus
ENSTRUG00000021248	msi2a	73	77.889	ENSJJAG00000006292	-	100	77.889	Jaculus_jaculus
ENSTRUG00000021248	msi2a	95	93.655	ENSKMAG00000009494	msi2a	93	98.805	Kryptolebias_marmoratus
ENSTRUG00000021248	msi2a	90	72.126	ENSLBEG00000026223	-	96	70.977	Labrus_bergylta
ENSTRUG00000021248	msi2a	96	97.985	ENSLBEG00000007061	msi2a	97	98.477	Labrus_bergylta
ENSTRUG00000021248	msi2a	50	74.490	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSTRUG00000021248	msi2a	95	89.313	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSTRUG00000021248	msi2a	88	91.556	ENSMFAG00000003775	MSI2	100	87.179	Macaca_fascicularis
ENSTRUG00000021248	msi2a	88	91.556	ENSMMUG00000002069	MSI2	100	87.179	Macaca_mulatta
ENSTRUG00000021248	msi2a	100	86.866	ENSMNEG00000045275	MSI2	100	86.866	Macaca_nemestrina
ENSTRUG00000021248	msi2a	88	91.556	ENSMLEG00000033888	MSI2	100	87.179	Mandrillus_leucophaeus
ENSTRUG00000021248	msi2a	95	98.228	ENSMAMG00000010503	msi2a	97	98.228	Mastacembelus_armatus
ENSTRUG00000021248	msi2a	97	87.597	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSTRUG00000021248	msi2a	95	98.477	ENSMZEG00005007676	msi2a	97	98.477	Maylandia_zebra
ENSTRUG00000021248	msi2a	100	81.921	ENSMAUG00000003862	Msi2	100	81.921	Mesocricetus_auratus
ENSTRUG00000021248	msi2a	100	86.866	ENSMICG00000013598	-	100	86.866	Microcebus_murinus
ENSTRUG00000021248	msi2a	100	68.235	ENSMICG00000032913	-	100	69.706	Microcebus_murinus
ENSTRUG00000021248	msi2a	100	82.153	ENSMOCG00000005820	Msi2	100	82.153	Microtus_ochrogaster
ENSTRUG00000021248	msi2a	97	80.549	ENSMMOG00000008348	msi2a	85	98.190	Mola_mola
ENSTRUG00000021248	msi2a	73	82.609	ENSMODG00000014790	MSI2	100	82.609	Monodelphis_domestica
ENSTRUG00000021248	msi2a	95	99.346	ENSMALG00000000071	msi2a	97	96.701	Monopterus_albus
ENSTRUG00000021248	msi2a	100	86.567	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSTRUG00000021248	msi2a	100	86.567	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSTRUG00000021248	msi2a	100	86.567	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSTRUG00000021248	msi2a	100	86.567	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSTRUG00000021248	msi2a	88	92.517	ENSMPUG00000015377	MSI2	97	92.517	Mustela_putorius_furo
ENSTRUG00000021248	msi2a	88	92.517	ENSMLUG00000007865	MSI2	97	92.517	Myotis_lucifugus
ENSTRUG00000021248	msi2a	100	82.153	ENSNGAG00000017807	Msi2	100	82.153	Nannospalax_galili
ENSTRUG00000021248	msi2a	100	91.642	ENSNBRG00000014596	msi2a	92	100.000	Neolamprologus_brichardi
ENSTRUG00000021248	msi2a	88	91.556	ENSNLEG00000008059	MSI2	95	93.301	Nomascus_leucogenys
ENSTRUG00000021248	msi2a	62	83.553	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSTRUG00000021248	msi2a	100	82.436	ENSODEG00000011974	MSI2	100	82.436	Octodon_degus
ENSTRUG00000021248	msi2a	59	88.608	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSTRUG00000021248	msi2a	82	95.238	ENSOANG00000005667	MSI2	97	77.805	Ornithorhynchus_anatinus
ENSTRUG00000021248	msi2a	88	92.517	ENSOCUG00000010440	MSI2	97	92.517	Oryctolagus_cuniculus
ENSTRUG00000021248	msi2a	100	89.552	ENSORLG00000009671	msi2a	94	99.203	Oryzias_latipes
ENSTRUG00000021248	msi2a	96	98.237	ENSORLG00020021556	msi2a	97	98.731	Oryzias_latipes_hni
ENSTRUG00000021248	msi2a	100	89.552	ENSORLG00015004592	msi2a	94	99.203	Oryzias_latipes_hsok
ENSTRUG00000021248	msi2a	95	93.909	ENSOMEG00000000146	msi2a	100	95.425	Oryzias_melastigma
ENSTRUG00000021248	msi2a	88	88.095	ENSOGAG00000005621	MSI2	99	88.095	Otolemur_garnettii
ENSTRUG00000021248	msi2a	88	87.179	ENSPPAG00000037697	MSI2	100	87.179	Pan_paniscus
ENSTRUG00000021248	msi2a	88	92.517	ENSPPRG00000001848	MSI2	94	92.517	Panthera_pardus
ENSTRUG00000021248	msi2a	73	72.131	ENSPTIG00000021873	-	90	75.527	Panthera_tigris_altaica
ENSTRUG00000021248	msi2a	88	87.138	ENSPTIG00000021678	MSI2	96	87.138	Panthera_tigris_altaica
ENSTRUG00000021248	msi2a	88	91.556	ENSPTRG00000009437	MSI2	100	87.179	Pan_troglodytes
ENSTRUG00000021248	msi2a	100	86.866	ENSPANG00000022319	MSI2	100	86.866	Papio_anubis
ENSTRUG00000021248	msi2a	96	83.801	ENSPKIG00000007038	-	92	92.593	Paramormyrops_kingsleyae
ENSTRUG00000021248	msi2a	50	77.551	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSTRUG00000021248	msi2a	100	88.192	ENSPSIG00000008618	MSI2	97	80.340	Pelodiscus_sinensis
ENSTRUG00000021248	msi2a	100	91.045	ENSPMGG00000005888	msi2a	100	91.045	Periophthalmus_magnuspinnatus
ENSTRUG00000021248	msi2a	100	80.886	ENSPCIG00000006063	MSI2	100	80.886	Phascolarctos_cinereus
ENSTRUG00000021248	msi2a	58	83.036	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSTRUG00000021248	msi2a	59	87.413	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSTRUG00000021248	msi2a	59	84.615	ENSPMEG00000013247	msi2a	75	88.971	Poecilia_mexicana
ENSTRUG00000021248	msi2a	95	98.223	ENSPREG00000000881	msi2a	97	98.223	Poecilia_reticulata
ENSTRUG00000021248	msi2a	88	89.076	ENSPPYG00000008244	-	100	89.076	Pongo_abelii
ENSTRUG00000021248	msi2a	84	63.866	ENSPCAG00000010552	MSI2	89	84.615	Procavia_capensis
ENSTRUG00000021248	msi2a	88	84.642	ENSPVAG00000017053	MSI2	100	84.642	Pteropus_vampyrus
ENSTRUG00000021248	msi2a	95	98.477	ENSPNYG00000018393	msi2a	97	98.477	Pundamilia_nyererei
ENSTRUG00000021248	msi2a	100	88.690	ENSPNAG00000014957	msi2a	93	96.016	Pygocentrus_nattereri
ENSTRUG00000021248	msi2a	100	87.202	ENSPNAG00000000844	msi2b	100	87.202	Pygocentrus_nattereri
ENSTRUG00000021248	msi2a	88	92.086	ENSRNOG00000025338	Msi2	100	92.086	Rattus_norvegicus
ENSTRUG00000021248	msi2a	88	91.964	ENSSBOG00000026425	MSI2	100	87.179	Saimiri_boliviensis_boliviensis
ENSTRUG00000021248	msi2a	88	87.179	ENSSHAG00000008672	MSI2	100	87.179	Sarcophilus_harrisii
ENSTRUG00000021248	msi2a	94	82.143	ENSSFOG00015012168	msi2b	90	71.392	Scleropages_formosus
ENSTRUG00000021248	msi2a	88	88.435	ENSSFOG00015021687	-	93	92.793	Scleropages_formosus
ENSTRUG00000021248	msi2a	96	98.237	ENSSMAG00000018484	msi2a	97	98.731	Scophthalmus_maximus
ENSTRUG00000021248	msi2a	95	98.477	ENSSDUG00000014507	msi2a	97	98.477	Seriola_dumerili
ENSTRUG00000021248	msi2a	100	82.609	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSTRUG00000021248	msi2a	96	97.985	ENSSLDG00000017172	msi2a	97	98.477	Seriola_lalandi_dorsalis
ENSTRUG00000021248	msi2a	59	81.818	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSTRUG00000021248	msi2a	95	98.477	ENSSPAG00000017793	msi2a	97	98.477	Stegastes_partitus
ENSTRUG00000021248	msi2a	100	86.866	ENSSSCG00000038505	MSI2	95	93.416	Sus_scrofa
ENSTRUG00000021248	msi2a	73	83.092	ENSTGUG00000008452	MSI2	100	83.092	Taeniopygia_guttata
ENSTRUG00000021248	msi2a	74	73.092	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSTRUG00000021248	msi2a	88	84.034	ENSTTRG00000002189	MSI2	100	84.034	Tursiops_truncatus
ENSTRUG00000021248	msi2a	88	92.517	ENSUAMG00000000700	MSI2	97	92.517	Ursus_americanus
ENSTRUG00000021248	msi2a	84	84.848	ENSUMAG00000000505	MSI2	95	93.782	Ursus_maritimus
ENSTRUG00000021248	msi2a	54	81.319	ENSVPAG00000006837	-	62	81.319	Vicugna_pacos
ENSTRUG00000021248	msi2a	100	82.436	ENSVVUG00000011783	MSI2	97	91.705	Vulpes_vulpes
ENSTRUG00000021248	msi2a	96	95.312	ENSXCOG00000006113	msi2a	97	92.386	Xiphophorus_couchianus
ENSTRUG00000021248	msi2a	95	98.477	ENSXMAG00000000608	msi2a	97	98.477	Xiphophorus_maculatus