EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000021367 (Gene tree)
Gene ID: 101071182
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4119 bases
Position: chrHE593280.1:1810-5928
Accession: 101071182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000050807	Mago-bind	PF09282.10	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052908	-	2984	XM_003979913	ENSTRUP00000050807	205 (aa)	XP_003979962	H2RUK4

Gene Model

Click here to download ENSTRUG00000021367's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021367	pym1	93	60.204	ENSG00000170473	PYM1	99	59.135	Homo_sapiens
ENSTRUG00000021367	pym1	100	76.777	ENSAPOG00000023045	pym1	99	74.882	Acanthochromis_polyacanthus
ENSTRUG00000021367	pym1	92	57.513	ENSAMEG00000003091	PYM1	97	56.585	Ailuropoda_melanoleuca
ENSTRUG00000021367	pym1	100	78.404	ENSACIG00000012769	pym1	99	80.282	Amphilophus_citrinellus
ENSTRUG00000021367	pym1	100	79.048	ENSAOCG00000021358	pym1	99	76.667	Amphiprion_ocellaris
ENSTRUG00000021367	pym1	100	79.048	ENSAPEG00000022679	pym1	99	76.667	Amphiprion_percula
ENSTRUG00000021367	pym1	99	75.962	ENSATEG00000024022	pym1	99	78.846	Anabas_testudineus
ENSTRUG00000021367	pym1	93	59.901	ENSACAG00000005714	PYM1	99	58.796	Anolis_carolinensis
ENSTRUG00000021367	pym1	93	59.694	ENSANAG00000036967	PYM1	99	58.654	Aotus_nancymaae
ENSTRUG00000021367	pym1	100	66.038	ENSAMXG00000007650	pym1	99	67.606	Astyanax_mexicanus
ENSTRUG00000021367	pym1	93	61.735	ENSBTAG00000031146	PYM1	99	60.577	Bos_taurus
ENSTRUG00000021367	pym1	93	60.204	ENSCJAG00000041077	PYM1	99	59.135	Callithrix_jacchus
ENSTRUG00000021367	pym1	93	61.224	ENSCAFG00000000076	PYM1	99	59.809	Canis_familiaris
ENSTRUG00000021367	pym1	93	61.224	ENSCAFG00020026099	PYM1	99	59.809	Canis_lupus_dingo
ENSTRUG00000021367	pym1	93	62.245	ENSCHIG00000026207	PYM1	99	60.577	Capra_hircus
ENSTRUG00000021367	pym1	93	59.694	ENSTSYG00000000787	PYM1	99	57.416	Carlito_syrichta
ENSTRUG00000021367	pym1	88	59.239	ENSCAPG00000010374	PYM1	98	58.163	Cavia_aperea
ENSTRUG00000021367	pym1	93	60.714	ENSCPOG00000031546	PYM1	99	59.615	Cavia_porcellus
ENSTRUG00000021367	pym1	93	60.204	ENSCCAG00000026187	PYM1	99	59.135	Cebus_capucinus
ENSTRUG00000021367	pym1	93	59.694	ENSCATG00000018801	PYM1	99	58.654	Cercocebus_atys
ENSTRUG00000021367	pym1	93	58.673	ENSCLAG00000007964	PYM1	99	58.654	Chinchilla_lanigera
ENSTRUG00000021367	pym1	88	58.378	ENSCSAG00000005291	PYM1	97	57.360	Chlorocebus_sabaeus
ENSTRUG00000021367	pym1	99	36.620	ENSCING00000006448	-	99	38.889	Ciona_intestinalis
ENSTRUG00000021367	pym1	99	36.036	ENSCSAVG00000009805	-	94	34.802	Ciona_savignyi
ENSTRUG00000021367	pym1	93	59.694	ENSCANG00000020338	-	99	58.654	Colobus_angolensis_palliatus
ENSTRUG00000021367	pym1	93	57.653	ENSCANG00000019757	-	85	57.653	Colobus_angolensis_palliatus
ENSTRUG00000021367	pym1	88	53.846	ENSCGRG00001004231	-	96	48.529	Cricetulus_griseus_chok1gshd
ENSTRUG00000021367	pym1	93	55.102	ENSCGRG00001018051	-	99	55.769	Cricetulus_griseus_chok1gshd
ENSTRUG00000021367	pym1	93	55.102	ENSCGRG00000012495	-	99	55.769	Cricetulus_griseus_crigri
ENSTRUG00000021367	pym1	88	53.846	ENSCGRG00000018933	-	96	48.529	Cricetulus_griseus_crigri
ENSTRUG00000021367	pym1	94	70.918	ENSCSEG00000021531	pym1	99	71.292	Cynoglossus_semilaevis
ENSTRUG00000021367	pym1	99	77.073	ENSCVAG00000017360	pym1	88	76.585	Cyprinodon_variegatus
ENSTRUG00000021367	pym1	99	58.333	ENSDARG00000046024	pym1	99	58.333	Danio_rerio
ENSTRUG00000021367	pym1	93	58.883	ENSDNOG00000048414	PYM1	90	57.895	Dasypus_novemcinctus
ENSTRUG00000021367	pym1	93	60.714	ENSDORG00000029448	Pym1	99	59.615	Dipodomys_ordii
ENSTRUG00000021367	pym1	99	33.333	FBgn0034918	Pym	98	34.199	Drosophila_melanogaster
ENSTRUG00000021367	pym1	88	56.216	ENSETEG00000004461	-	98	55.556	Echinops_telfairi
ENSTRUG00000021367	pym1	87	57.923	ENSEASG00005002271	PYM1	85	56.923	Equus_asinus_asinus
ENSTRUG00000021367	pym1	93	59.694	ENSECAG00000011870	PYM1	99	58.654	Equus_caballus
ENSTRUG00000021367	pym1	96	69.898	ENSELUG00000024250	pym1	99	64.651	Esox_lucius
ENSTRUG00000021367	pym1	93	60.714	ENSFCAG00000013967	PYM1	99	59.330	Felis_catus
ENSTRUG00000021367	pym1	93	60.204	ENSFDAG00000006314	PYM1	99	59.135	Fukomys_damarensis
ENSTRUG00000021367	pym1	94	79.500	ENSFHEG00000005884	pym1	99	73.585	Fundulus_heteroclitus
ENSTRUG00000021367	pym1	93	68.229	ENSGMOG00000007239	pym1	97	67.980	Gadus_morhua
ENSTRUG00000021367	pym1	93	64.796	ENSGALG00000046169	PYM1	99	63.981	Gallus_gallus
ENSTRUG00000021367	pym1	100	76.636	ENSGAFG00000003280	pym1	99	72.897	Gambusia_affinis
ENSTRUG00000021367	pym1	100	73.171	ENSGACG00000010703	pym1	99	73.171	Gasterosteus_aculeatus
ENSTRUG00000021367	pym1	89	60.000	ENSGAGG00000001973	PYM1	89	58.852	Gopherus_agassizii
ENSTRUG00000021367	pym1	93	60.204	ENSGGOG00000043246	PYM1	99	59.135	Gorilla_gorilla
ENSTRUG00000021367	pym1	94	78.680	ENSHBUG00000012719	pym1	99	78.571	Haplochromis_burtoni
ENSTRUG00000021367	pym1	93	59.391	ENSHGLG00000017155	PYM1	99	58.373	Heterocephalus_glaber_female
ENSTRUG00000021367	pym1	93	59.391	ENSHGLG00100015341	PYM1	99	58.373	Heterocephalus_glaber_male
ENSTRUG00000021367	pym1	99	70.952	ENSHCOG00000007987	pym1	85	69.048	Hippocampus_comes
ENSTRUG00000021367	pym1	100	70.531	ENSIPUG00000005975	wibga	99	70.531	Ictalurus_punctatus
ENSTRUG00000021367	pym1	93	58.163	ENSSTOG00000014206	PYM1	99	57.212	Ictidomys_tridecemlineatus
ENSTRUG00000021367	pym1	93	58.376	ENSJJAG00000013338	Pym1	99	56.938	Jaculus_jaculus
ENSTRUG00000021367	pym1	100	72.273	ENSKMAG00000006351	pym1	99	72.727	Kryptolebias_marmoratus
ENSTRUG00000021367	pym1	100	77.778	ENSLBEG00000015707	pym1	99	77.778	Labrus_bergylta
ENSTRUG00000021367	pym1	89	63.731	ENSLACG00000014398	PYM1	94	61.353	Latimeria_chalumnae
ENSTRUG00000021367	pym1	93	62.245	ENSLAFG00000002369	PYM1	99	60.577	Loxodonta_africana
ENSTRUG00000021367	pym1	93	59.694	ENSMFAG00000003048	PYM1	99	58.654	Macaca_fascicularis
ENSTRUG00000021367	pym1	93	59.694	ENSMMUG00000011002	PYM1	99	58.654	Macaca_mulatta
ENSTRUG00000021367	pym1	93	59.694	ENSMNEG00000034677	PYM1	99	58.654	Macaca_nemestrina
ENSTRUG00000021367	pym1	93	59.694	ENSMLEG00000007971	PYM1	99	58.654	Mandrillus_leucophaeus
ENSTRUG00000021367	pym1	99	76.279	ENSMAMG00000001588	pym1	99	73.488	Mastacembelus_armatus
ENSTRUG00000021367	pym1	94	78.173	ENSMZEG00005026458	pym1	99	78.095	Maylandia_zebra
ENSTRUG00000021367	pym1	93	56.122	ENSMAUG00000007318	Pym1	99	57.212	Mesocricetus_auratus
ENSTRUG00000021367	pym1	93	59.391	ENSMICG00000032962	PYM1	99	58.373	Microcebus_murinus
ENSTRUG00000021367	pym1	93	53.571	ENSMOCG00000010208	Pym1	99	54.976	Microtus_ochrogaster
ENSTRUG00000021367	pym1	100	72.195	ENSMMOG00000009301	pym1	99	71.359	Mola_mola
ENSTRUG00000021367	pym1	100	76.777	ENSMALG00000013496	pym1	99	75.355	Monopterus_albus
ENSTRUG00000021367	pym1	93	56.633	MGP_CAROLIEiJ_G0015953	Pym1	99	55.769	Mus_caroli
ENSTRUG00000021367	pym1	93	55.612	ENSMUSG00000064030	Pym1	99	54.808	Mus_musculus
ENSTRUG00000021367	pym1	93	58.031	MGP_PahariEiJ_G0031131	Pym1	98	57.073	Mus_pahari
ENSTRUG00000021367	pym1	93	55.612	MGP_SPRETEiJ_G0016778	Pym1	99	54.808	Mus_spretus
ENSTRUG00000021367	pym1	93	59.694	ENSMPUG00000000931	PYM1	99	58.654	Mustela_putorius_furo
ENSTRUG00000021367	pym1	93	57.949	ENSMLUG00000003586	PYM1	99	56.522	Myotis_lucifugus
ENSTRUG00000021367	pym1	89	55.914	ENSNGAG00000019207	Pym1	92	55.051	Nannospalax_galili
ENSTRUG00000021367	pym1	100	77.619	ENSNBRG00000006951	pym1	99	78.571	Neolamprologus_brichardi
ENSTRUG00000021367	pym1	93	60.204	ENSNLEG00000017588	PYM1	99	59.135	Nomascus_leucogenys
ENSTRUG00000021367	pym1	90	55.851	ENSMEUG00000001017	PYM1	98	55.838	Notamacropus_eugenii
ENSTRUG00000021367	pym1	91	56.545	ENSOPRG00000007797	PYM1	96	55.172	Ochotona_princeps
ENSTRUG00000021367	pym1	93	59.694	ENSODEG00000004289	PYM1	99	58.654	Octodon_degus
ENSTRUG00000021367	pym1	94	78.500	ENSONIG00000016740	pym1	99	78.404	Oreochromis_niloticus
ENSTRUG00000021367	pym1	88	58.919	ENSOCUG00000025969	PYM1	85	57.071	Oryctolagus_cuniculus
ENSTRUG00000021367	pym1	100	72.115	ENSORLG00000030592	pym1	99	72.115	Oryzias_latipes
ENSTRUG00000021367	pym1	100	70.335	ENSORLG00020011264	pym1	99	71.770	Oryzias_latipes_hni
ENSTRUG00000021367	pym1	100	72.330	ENSORLG00015005287	pym1	99	72.330	Oryzias_latipes_hsok
ENSTRUG00000021367	pym1	100	71.028	ENSOMEG00000022250	pym1	99	73.023	Oryzias_melastigma
ENSTRUG00000021367	pym1	88	59.459	ENSOGAG00000007038	PYM1	93	58.376	Otolemur_garnettii
ENSTRUG00000021367	pym1	93	62.245	ENSOARG00000010856	PYM1	99	60.577	Ovis_aries
ENSTRUG00000021367	pym1	93	60.204	ENSPPAG00000043630	PYM1	99	59.135	Pan_paniscus
ENSTRUG00000021367	pym1	93	60.714	ENSPPRG00000013243	PYM1	99	59.615	Panthera_pardus
ENSTRUG00000021367	pym1	93	59.694	ENSPTIG00000017380	PYM1	99	58.173	Panthera_tigris_altaica
ENSTRUG00000021367	pym1	93	60.204	ENSPTRG00000005067	PYM1	99	59.135	Pan_troglodytes
ENSTRUG00000021367	pym1	93	60.204	ENSPANG00000009562	PYM1	99	59.135	Papio_anubis
ENSTRUG00000021367	pym1	100	69.856	ENSPKIG00000006301	pym1	99	69.856	Paramormyrops_kingsleyae
ENSTRUG00000021367	pym1	93	57.214	ENSPSIG00000003043	PYM1	99	56.279	Pelodiscus_sinensis
ENSTRUG00000021367	pym1	100	66.184	ENSPMGG00000023161	pym1	99	66.184	Periophthalmus_magnuspinnatus
ENSTRUG00000021367	pym1	93	54.082	ENSPEMG00000009372	Pym1	99	54.327	Peromyscus_maniculatus_bairdii
ENSTRUG00000021367	pym1	88	55.676	ENSPCIG00000024658	PYM1	92	55.051	Phascolarctos_cinereus
ENSTRUG00000021367	pym1	100	78.947	ENSPFOG00000008193	pym1	99	78.469	Poecilia_formosa
ENSTRUG00000021367	pym1	100	78.774	ENSPLAG00000009228	pym1	99	75.000	Poecilia_latipinna
ENSTRUG00000021367	pym1	100	78.774	ENSPMEG00000001505	pym1	99	75.000	Poecilia_mexicana
ENSTRUG00000021367	pym1	89	58.289	ENSPPYG00000004635	PYM1	97	57.360	Pongo_abelii
ENSTRUG00000021367	pym1	93	60.406	ENSPCOG00000019706	PYM1	99	59.330	Propithecus_coquereli
ENSTRUG00000021367	pym1	89	59.677	ENSPVAG00000011437	PYM1	97	58.586	Pteropus_vampyrus
ENSTRUG00000021367	pym1	94	78.571	ENSPNYG00000012871	pym1	99	77.990	Pundamilia_nyererei
ENSTRUG00000021367	pym1	100	66.822	ENSPNAG00000018833	pym1	99	66.822	Pygocentrus_nattereri
ENSTRUG00000021367	pym1	93	54.124	ENSRNOG00000058130	Pym1	97	55.340	Rattus_norvegicus
ENSTRUG00000021367	pym1	80	48.780	ENSRNOG00000049415	AABR07055413.1	98	38.835	Rattus_norvegicus
ENSTRUG00000021367	pym1	93	55.612	ENSRBIG00000033362	PYM1	98	54.808	Rhinopithecus_bieti
ENSTRUG00000021367	pym1	93	59.694	ENSRROG00000043620	PYM1	99	58.654	Rhinopithecus_roxellana
ENSTRUG00000021367	pym1	93	60.204	ENSSBOG00000029393	PYM1	99	59.135	Saimiri_boliviensis_boliviensis
ENSTRUG00000021367	pym1	95	57.789	ENSSHAG00000008280	PYM1	99	57.692	Sarcophilus_harrisii
ENSTRUG00000021367	pym1	93	67.839	ENSSFOG00015021475	pym1	99	67.136	Scleropages_formosus
ENSTRUG00000021367	pym1	100	75.000	ENSSMAG00000020912	pym1	99	76.442	Scophthalmus_maximus
ENSTRUG00000021367	pym1	100	76.995	ENSSDUG00000001807	pym1	99	77.465	Seriola_dumerili
ENSTRUG00000021367	pym1	100	75.349	ENSSLDG00000013730	pym1	99	75.814	Seriola_lalandi_dorsalis
ENSTRUG00000021367	pym1	88	57.297	ENSSARG00000009569	PYM1	98	58.376	Sorex_araneus
ENSTRUG00000021367	pym1	90	56.545	ENSSPUG00000015059	PYM1	97	55.610	Sphenodon_punctatus
ENSTRUG00000021367	pym1	99	77.830	ENSSPAG00000020100	pym1	99	75.943	Stegastes_partitus
ENSTRUG00000021367	pym1	93	62.245	ENSSSCG00000040825	PYM1	99	61.058	Sus_scrofa
ENSTRUG00000021367	pym1	99	74.766	ENSTNIG00000012534	pym1	99	75.349	Tetraodon_nigroviridis
ENSTRUG00000021367	pym1	88	56.452	ENSTBEG00000004208	PYM1	98	55.051	Tupaia_belangeri
ENSTRUG00000021367	pym1	89	59.358	ENSTTRG00000014971	PYM1	97	59.799	Tursiops_truncatus
ENSTRUG00000021367	pym1	93	59.184	ENSUAMG00000014521	PYM1	99	57.895	Ursus_americanus
ENSTRUG00000021367	pym1	89	57.527	ENSUMAG00000016241	PYM1	85	56.345	Ursus_maritimus
ENSTRUG00000021367	pym1	93	60.714	ENSVVUG00000022749	PYM1	99	59.330	Vulpes_vulpes
ENSTRUG00000021367	pym1	93	63.874	ENSXETG00000021850	pym1	99	61.951	Xenopus_tropicalis
ENSTRUG00000021367	pym1	100	77.830	ENSXMAG00000011649	pym1	99	74.057	Xiphophorus_maculatus