EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000021378 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2454 bases
Position: chrHE592867.1:10544-12997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000056044	RRM_1	PF00076.22	9.8e-36	1	2
ENSTRUP00000056044	RRM_1	PF00076.22	9.8e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054161	-	795	-	ENSTRUP00000056044	265 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000021378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000021378	-	65	34.921	ENSTRUG00000017937	celf5a	50	34.921
ENSTRUG00000021378	-	64	40.278	ENSTRUG00000003767	-	57	40.278
ENSTRUG00000021378	-	59	35.000	ENSTRUG00000008411	-	50	35.000
ENSTRUG00000021378	-	65	45.333	ENSTRUG00000011085	pabpc1l	59	45.333
ENSTRUG00000021378	-	64	38.889	ENSTRUG00000005907	pabpc4	56	38.889
ENSTRUG00000021378	-	64	40.278	ENSTRUG00000011577	-	56	40.278
ENSTRUG00000021378	-	73	34.951	ENSTRUG00000010719	elavl3	89	34.951
ENSTRUG00000021378	-	72	32.353	ENSTRUG00000023704	elavl1a	89	32.353
ENSTRUG00000021378	-	73	35.922	ENSTRUG00000000523	elavl4	64	35.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021378	-	86	79.736	ENSG00000131051	RBM39	85	83.256	Homo_sapiens
ENSTRUG00000021378	-	99	75.000	ENSAPOG00000000306	rbm39b	94	75.758	Acanthochromis_polyacanthus
ENSTRUG00000021378	-	81	85.581	ENSACIG00000021116	rbm39b	81	86.512	Amphilophus_citrinellus
ENSTRUG00000021378	-	86	82.819	ENSAOCG00000006206	rbm39b	51	75.758	Amphiprion_ocellaris
ENSTRUG00000021378	-	86	82.819	ENSAPEG00000011141	rbm39b	51	75.758	Amphiprion_percula
ENSTRUG00000021378	-	86	84.141	ENSATEG00000009461	-	61	84.141	Anabas_testudineus
ENSTRUG00000021378	-	99	74.242	ENSATEG00000007482	rbm39b	51	75.000	Anabas_testudineus
ENSTRUG00000021378	-	99	73.684	ENSAMXG00000012946	rbm39b	51	73.684	Astyanax_mexicanus
ENSTRUG00000021378	-	86	79.736	ENSCJAG00000017535	RBM39	62	79.736	Callithrix_jacchus
ENSTRUG00000021378	-	86	79.736	ENSTSYG00000005605	RBM39	62	79.736	Carlito_syrichta
ENSTRUG00000021378	-	86	71.930	ENSCPOG00000014625	-	52	71.930	Cavia_porcellus
ENSTRUG00000021378	-	86	79.736	ENSCCAG00000031689	-	62	79.736	Cebus_capucinus
ENSTRUG00000021378	-	86	59.471	ENSCATG00000030221	-	55	59.471	Cercocebus_atys
ENSTRUG00000021378	-	80	77.358	ENSCATG00000032917	-	57	77.358	Cercocebus_atys
ENSTRUG00000021378	-	86	79.736	ENSCANG00000031033	-	62	79.736	Colobus_angolensis_palliatus
ENSTRUG00000021378	-	86	82.379	ENSCVAG00000014408	-	62	82.379	Cyprinodon_variegatus
ENSTRUG00000021378	-	86	79.736	ENSEASG00005003936	RBM39	56	79.736	Equus_asinus_asinus
ENSTRUG00000021378	-	68	74.033	ENSFDAG00000007943	-	57	74.033	Fukomys_damarensis
ENSTRUG00000021378	-	81	65.581	ENSFDAG00000021507	-	63	65.581	Fukomys_damarensis
ENSTRUG00000021378	-	52	76.812	ENSFHEG00000006810	-	64	76.812	Fundulus_heteroclitus
ENSTRUG00000021378	-	86	65.639	ENSGAFG00000019545	-	59	64.783	Gambusia_affinis
ENSTRUG00000021378	-	99	73.485	ENSGACG00000002797	rbm39b	70	74.242	Gasterosteus_aculeatus
ENSTRUG00000021378	-	86	79.736	ENSGGOG00000003950	RBM39	62	79.736	Gorilla_gorilla
ENSTRUG00000021378	-	86	66.520	ENSGGOG00000036253	-	50	66.520	Gorilla_gorilla
ENSTRUG00000021378	-	86	57.895	ENSHGLG00100000829	-	55	57.895	Heterocephalus_glaber_male
ENSTRUG00000021378	-	76	61.692	ENSHGLG00100008245	-	56	61.692	Heterocephalus_glaber_male
ENSTRUG00000021378	-	99	72.727	ENSIPUG00000024623	rbm39	54	72.727	Ictalurus_punctatus
ENSTRUG00000021378	-	86	79.736	ENSSTOG00000030698	RBM39	53	79.736	Ictidomys_tridecemlineatus
ENSTRUG00000021378	-	84	72.646	ENSJJAG00000016745	-	58	72.646	Jaculus_jaculus
ENSTRUG00000021378	-	82	80.822	ENSKMAG00000014566	-	78	81.279	Kryptolebias_marmoratus
ENSTRUG00000021378	-	86	79.295	ENSLBEG00000008018	-	62	79.295	Labrus_bergylta
ENSTRUG00000021378	-	92	78.367	ENSLBEG00000009909	rbm39b	79	87.383	Labrus_bergylta
ENSTRUG00000021378	-	93	72.874	ENSLACG00000016576	-	65	72.874	Latimeria_chalumnae
ENSTRUG00000021378	-	86	79.736	ENSMNEG00000040217	RBM39	62	79.736	Macaca_nemestrina
ENSTRUG00000021378	-	86	59.471	ENSMLEG00000030882	-	55	59.471	Mandrillus_leucophaeus
ENSTRUG00000021378	-	86	79.736	ENSMLEG00000031533	-	62	79.736	Mandrillus_leucophaeus
ENSTRUG00000021378	-	86	79.736	ENSMICG00000001668	RBM39	62	79.736	Microcebus_murinus
ENSTRUG00000021378	-	77	69.608	ENSMICG00000035049	-	53	60.748	Microcebus_murinus
ENSTRUG00000021378	-	92	80.328	ENSMMOG00000017823	-	90	80.328	Mola_mola
ENSTRUG00000021378	-	99	74.242	ENSMMOG00000020616	rbm39b	51	75.000	Mola_mola
ENSTRUG00000021378	-	86	79.736	MGP_CAROLIEiJ_G0024554	Rbm39	64	71.366	Mus_caroli
ENSTRUG00000021378	-	86	79.736	ENSMUSG00000027620	Rbm39	64	71.366	Mus_musculus
ENSTRUG00000021378	-	86	79.736	MGP_PahariEiJ_G0025999	Rbm39	64	71.366	Mus_pahari
ENSTRUG00000021378	-	86	79.736	MGP_SPRETEiJ_G0025476	Rbm39	64	71.366	Mus_spretus
ENSTRUG00000021378	-	86	82.819	ENSOMEG00000001685	-	53	72.628	Oryzias_melastigma
ENSTRUG00000021378	-	86	79.736	ENSPTRG00000045535	-	59	79.736	Pan_troglodytes
ENSTRUG00000021378	-	86	79.736	ENSPTRG00000049720	-	59	79.736	Pan_troglodytes
ENSTRUG00000021378	-	86	79.736	ENSPANG00000021248	RBM39	62	79.736	Papio_anubis
ENSTRUG00000021378	-	86	81.498	ENSPKIG00000017145	rbm39a	54	70.609	Paramormyrops_kingsleyae
ENSTRUG00000021378	-	86	81.498	ENSPKIG00000007461	-	66	81.498	Paramormyrops_kingsleyae
ENSTRUG00000021378	-	86	79.736	ENSPMGG00000021264	-	76	82.488	Periophthalmus_magnuspinnatus
ENSTRUG00000021378	-	81	86.047	ENSPMGG00000023123	rbm39b	83	86.047	Periophthalmus_magnuspinnatus
ENSTRUG00000021378	-	86	83.260	ENSPLAG00000013925	-	67	81.746	Poecilia_latipinna
ENSTRUG00000021378	-	86	83.260	ENSPMEG00000002750	-	51	68.978	Poecilia_mexicana
ENSTRUG00000021378	-	86	83.260	ENSPREG00000021088	-	68	82.114	Poecilia_reticulata
ENSTRUG00000021378	-	86	79.736	ENSPCOG00000027976	-	62	79.736	Propithecus_coquereli
ENSTRUG00000021378	-	81	76.636	ENSPCOG00000025238	-	65	76.636	Propithecus_coquereli
ENSTRUG00000021378	-	92	80.000	ENSPNYG00000010982	-	90	80.000	Pundamilia_nyererei
ENSTRUG00000021378	-	99	71.805	ENSPNAG00000007787	rbm39b	51	71.805	Pygocentrus_nattereri
ENSTRUG00000021378	-	99	73.485	ENSPNAG00000007852	rbm39a	70	73.485	Pygocentrus_nattereri
ENSTRUG00000021378	-	86	79.736	ENSRBIG00000044413	-	62	79.736	Rhinopithecus_bieti
ENSTRUG00000021378	-	86	62.115	ENSRBIG00000013669	-	55	62.115	Rhinopithecus_bieti
ENSTRUG00000021378	-	99	73.864	ENSSMAG00000010777	rbm39b	51	74.621	Scophthalmus_maximus
ENSTRUG00000021378	-	99	74.242	ENSSDUG00000014712	rbm39b	51	75.000	Seriola_dumerili
ENSTRUG00000021378	-	99	74.242	ENSSLDG00000006938	rbm39b	51	75.000	Seriola_lalandi_dorsalis
ENSTRUG00000021378	-	83	74.667	ENSSPUG00000012393	RBM39	59	75.225	Sphenodon_punctatus
ENSTRUG00000021378	-	86	81.498	ENSTNIG00000017904	rbm39b	50	82.379	Tetraodon_nigroviridis
ENSTRUG00000021378	-	86	83.260	ENSXCOG00000017255	-	60	83.260	Xiphophorus_couchianus
ENSTRUG00000021378	-	82	87.037	ENSXMAG00000012463	-	60	87.037	Xiphophorus_maculatus