EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000021397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 864 bases
Position: chrHE592447.1:7981-8844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007606	RRM_1	PF00076.22	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000007653	-	279	-	ENSTRUP00000007606	92 (aa)	-	H2S5D4

Gene Model

Click here to download ENSTRUG00000021397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000021397	-	82	47.436	ENSTRUG00000024882	srsf3b	50	44.186
ENSTRUG00000021397	-	66	35.484	ENSTRUG00000021320	RALYL	67	35.484
ENSTRUG00000021397	-	83	32.468	ENSTRUG00000002153	-	58	32.468
ENSTRUG00000021397	-	84	33.735	ENSTRUG00000020496	-	99	33.735
ENSTRUG00000021397	-	83	43.038	ENSTRUG00000023965	-	62	43.590
ENSTRUG00000021397	-	74	32.895	ENSTRUG00000010187	cirbpa	56	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021397	-	87	92.500	ENSG00000124193	SRSF6	59	92.500	Homo_sapiens
ENSTRUG00000021397	-	87	96.250	ENSAPOG00000016635	-	50	96.250	Acanthochromis_polyacanthus
ENSTRUG00000021397	-	95	85.057	ENSACIG00000020091	-	84	85.057	Amphilophus_citrinellus
ENSTRUG00000021397	-	87	96.250	ENSAOCG00000019438	-	70	96.250	Amphiprion_ocellaris
ENSTRUG00000021397	-	87	92.500	ENSANAG00000024080	SRSF6	59	92.500	Aotus_nancymaae
ENSTRUG00000021397	-	79	91.781	ENSACLG00000024373	-	80	92.105	Astatotilapia_calliptera
ENSTRUG00000021397	-	79	94.521	ENSAMXG00000042692	-	57	93.750	Astyanax_mexicanus
ENSTRUG00000021397	-	87	93.750	ENSBTAG00000008527	SRSF6	59	93.750	Bos_taurus
ENSTRUG00000021397	-	87	92.500	ENSCJAG00000048403	SRSF6	59	92.500	Callithrix_jacchus
ENSTRUG00000021397	-	87	93.750	ENSCAFG00000009289	SRSF6	59	93.750	Canis_familiaris
ENSTRUG00000021397	-	87	93.750	ENSCAFG00020013559	SRSF6	59	93.750	Canis_lupus_dingo
ENSTRUG00000021397	-	87	93.750	ENSCHIG00000015890	-	59	93.750	Capra_hircus
ENSTRUG00000021397	-	87	92.500	ENSCPOG00000011761	SRSF6	59	92.500	Cavia_porcellus
ENSTRUG00000021397	-	87	92.500	ENSCCAG00000026018	-	59	92.500	Cebus_capucinus
ENSTRUG00000021397	-	87	92.500	ENSCATG00000030794	SRSF6	59	92.500	Cercocebus_atys
ENSTRUG00000021397	-	87	92.500	ENSCLAG00000010247	SRSF6	59	92.500	Chinchilla_lanigera
ENSTRUG00000021397	-	87	92.500	ENSCGRG00001022339	Srsf6	59	92.500	Cricetulus_griseus_chok1gshd
ENSTRUG00000021397	-	87	98.750	ENSCSEG00000019778	SRSF6	60	98.750	Cynoglossus_semilaevis
ENSTRUG00000021397	-	87	96.250	ENSCVAG00000001863	SRSF6	79	96.250	Cyprinodon_variegatus
ENSTRUG00000021397	-	79	95.890	ENSDARG00000016783	srsf6b	92	86.957	Danio_rerio
ENSTRUG00000021397	-	87	92.500	ENSDORG00000028378	Srsf6	59	92.500	Dipodomys_ordii
ENSTRUG00000021397	-	85	93.590	ENSELUG00000024182	SRSF6	76	93.590	Esox_lucius
ENSTRUG00000021397	-	87	93.750	ENSELUG00000013506	SRSF6	71	93.750	Esox_lucius
ENSTRUG00000021397	-	95	86.207	ENSGALG00000000990	SRSF6	64	86.207	Gallus_gallus
ENSTRUG00000021397	-	87	92.500	ENSGGOG00000009808	SRSF6	59	92.500	Gorilla_gorilla
ENSTRUG00000021397	-	87	92.500	ENSHGLG00000007348	SRSF6	59	92.500	Heterocephalus_glaber_female
ENSTRUG00000021397	-	87	92.500	ENSSTOG00000010866	SRSF6	59	92.500	Ictidomys_tridecemlineatus
ENSTRUG00000021397	-	87	92.500	ENSMFAG00000036925	SRSF6	59	92.500	Macaca_fascicularis
ENSTRUG00000021397	-	87	92.500	ENSMMUG00000006742	SRSF6	59	92.500	Macaca_mulatta
ENSTRUG00000021397	-	87	91.250	ENSMNEG00000027392	-	59	91.250	Macaca_nemestrina
ENSTRUG00000021397	-	83	93.421	ENSMAMG00000023477	-	82	93.421	Mastacembelus_armatus
ENSTRUG00000021397	-	87	92.500	ENSMAUG00000019086	-	59	92.500	Mesocricetus_auratus
ENSTRUG00000021397	-	87	92.500	ENSMICG00000008537	SRSF6	59	92.500	Microcebus_murinus
ENSTRUG00000021397	-	87	97.500	ENSMMOG00000015241	-	75	97.500	Mola_mola
ENSTRUG00000021397	-	87	92.500	MGP_CAROLIEiJ_G0024606	Srsf6	59	92.500	Mus_caroli
ENSTRUG00000021397	-	87	92.500	ENSMUSG00000016921	Srsf6	59	92.500	Mus_musculus
ENSTRUG00000021397	-	87	92.500	MGP_PahariEiJ_G0026050	Srsf6	59	92.500	Mus_pahari
ENSTRUG00000021397	-	87	92.500	MGP_SPRETEiJ_G0025528	Srsf6	59	92.500	Mus_spretus
ENSTRUG00000021397	-	87	92.500	ENSNGAG00000017560	Srsf6	59	92.500	Nannospalax_galili
ENSTRUG00000021397	-	87	92.500	ENSNLEG00000006524	SRSF6	59	92.500	Nomascus_leucogenys
ENSTRUG00000021397	-	87	92.500	ENSODEG00000016510	-	59	92.500	Octodon_degus
ENSTRUG00000021397	-	87	92.500	ENSPTRG00000044686	-	59	92.500	Pan_troglodytes
ENSTRUG00000021397	-	87	92.500	ENSPANG00000035224	SRSF6	59	92.500	Papio_anubis
ENSTRUG00000021397	-	85	96.154	ENSPKIG00000015603	-	57	95.000	Paramormyrops_kingsleyae
ENSTRUG00000021397	-	87	93.750	ENSPKIG00000018463	-	84	88.235	Paramormyrops_kingsleyae
ENSTRUG00000021397	-	78	79.167	ENSPKIG00000015703	-	57	79.167	Paramormyrops_kingsleyae
ENSTRUG00000021397	-	87	92.500	ENSPCIG00000003820	SRSF6	59	92.500	Phascolarctos_cinereus
ENSTRUG00000021397	-	87	97.500	ENSPLAG00000009243	srsf6a	50	97.500	Poecilia_latipinna
ENSTRUG00000021397	-	87	97.500	ENSPREG00000001040	srsf6a	54	97.500	Poecilia_reticulata
ENSTRUG00000021397	-	87	92.500	ENSPCOG00000026364	SRSF6	59	92.500	Propithecus_coquereli
ENSTRUG00000021397	-	87	93.750	ENSPNAG00000023179	-	62	93.750	Pygocentrus_nattereri
ENSTRUG00000021397	-	89	90.244	ENSRBIG00000041414	SRSF6	63	90.244	Rhinopithecus_bieti
ENSTRUG00000021397	-	87	92.500	ENSRROG00000029989	SRSF6	59	92.500	Rhinopithecus_roxellana
ENSTRUG00000021397	-	87	92.500	ENSSBOG00000033708	-	59	92.500	Saimiri_boliviensis_boliviensis
ENSTRUG00000021397	-	87	96.250	ENSSMAG00000014861	-	59	96.250	Scophthalmus_maximus
ENSTRUG00000021397	-	83	93.421	ENSSDUG00000011036	-	83	93.421	Seriola_dumerili
ENSTRUG00000021397	-	83	93.421	ENSSLDG00000014858	-	83	93.421	Seriola_lalandi_dorsalis
ENSTRUG00000021397	-	95	86.207	ENSSPUG00000004967	SRSF6	64	86.207	Sphenodon_punctatus
ENSTRUG00000021397	-	83	92.105	ENSSPAG00000021913	-	79	92.105	Stegastes_partitus
ENSTRUG00000021397	-	87	93.750	ENSUAMG00000003559	SRSF6	59	93.750	Ursus_americanus
ENSTRUG00000021397	-	87	60.000	ENSVVUG00000019276	-	57	60.000	Vulpes_vulpes