EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000021443 (Gene tree)
Gene ID: 101075971
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3775 bases
Position: chr11:9326936-9330710
Accession: 101075971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055150	SBDS	PF01172.18	2.8e-34	1	1
ENSTRUP00000055150	SBDS_C	PF09377.10	1.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054074	-	2674	XM_003968612	ENSTRUP00000055150	249 (aa)	XP_003968661	H2UW24

Gene Model

Click here to download ENSTRUG00000021443's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021443	sbds	100	83.133	ENSG00000126524	SBDS	97	89.157	Homo_sapiens
ENSTRUG00000021443	sbds	100	96.386	ENSAPOG00000014285	sbds	100	96.386	Acanthochromis_polyacanthus
ENSTRUG00000021443	sbds	100	83.133	ENSAMEG00000018167	SBDS	99	83.133	Ailuropoda_melanoleuca
ENSTRUG00000021443	sbds	100	96.032	ENSACIG00000007308	sbds	100	96.032	Amphilophus_citrinellus
ENSTRUG00000021443	sbds	100	96.787	ENSAOCG00000016770	sbds	100	96.787	Amphiprion_ocellaris
ENSTRUG00000021443	sbds	100	97.189	ENSAPEG00000015897	sbds	100	97.189	Amphiprion_percula
ENSTRUG00000021443	sbds	100	96.386	ENSATEG00000006901	sbds	100	96.386	Anabas_testudineus
ENSTRUG00000021443	sbds	83	82.039	ENSANAG00000037501	-	99	82.039	Aotus_nancymaae
ENSTRUG00000021443	sbds	93	77.056	ENSANAG00000024342	-	95	79.518	Aotus_nancymaae
ENSTRUG00000021443	sbds	100	96.386	ENSACLG00000018750	sbds	100	96.386	Astatotilapia_calliptera
ENSTRUG00000021443	sbds	100	88.755	ENSAMXG00000005361	sbds	99	88.755	Astyanax_mexicanus
ENSTRUG00000021443	sbds	100	83.133	ENSBTAG00000004051	SBDS	99	83.133	Bos_taurus
ENSTRUG00000021443	sbds	98	57.724	WBGene00021063	sbds-1	97	57.724	Caenorhabditis_elegans
ENSTRUG00000021443	sbds	100	83.133	ENSCJAG00000041007	SBDS	99	83.133	Callithrix_jacchus
ENSTRUG00000021443	sbds	100	81.275	ENSCAFG00000010797	SBDS	99	81.275	Canis_familiaris
ENSTRUG00000021443	sbds	100	83.133	ENSCAFG00020005357	SBDS	99	83.133	Canis_lupus_dingo
ENSTRUG00000021443	sbds	100	83.133	ENSCHIG00000026854	SBDS	99	83.133	Capra_hircus
ENSTRUG00000021443	sbds	100	83.133	ENSTSYG00000033822	SBDS	99	83.133	Carlito_syrichta
ENSTRUG00000021443	sbds	65	80.982	ENSCAPG00000006634	SBDS	99	80.982	Cavia_aperea
ENSTRUG00000021443	sbds	100	83.936	ENSCPOG00000036143	SBDS	99	83.936	Cavia_porcellus
ENSTRUG00000021443	sbds	100	82.731	ENSCCAG00000020671	SBDS	93	89.157	Cebus_capucinus
ENSTRUG00000021443	sbds	100	83.133	ENSCATG00000039026	SBDS	99	83.133	Cercocebus_atys
ENSTRUG00000021443	sbds	99	58.871	ENSCLAG00000002113	-	99	58.871	Chinchilla_lanigera
ENSTRUG00000021443	sbds	100	84.337	ENSCLAG00000005721	-	99	84.337	Chinchilla_lanigera
ENSTRUG00000021443	sbds	100	83.133	ENSCSAG00000018275	SBDS	99	83.133	Chlorocebus_sabaeus
ENSTRUG00000021443	sbds	100	78.715	ENSCHOG00000003795	SBDS	99	78.715	Choloepus_hoffmanni
ENSTRUG00000021443	sbds	100	85.944	ENSCPBG00000014893	SBDS	99	85.944	Chrysemys_picta_bellii
ENSTRUG00000021443	sbds	100	67.200	ENSCSAVG00000011811	-	100	67.200	Ciona_savignyi
ENSTRUG00000021443	sbds	100	82.731	ENSCANG00000032368	SBDS	99	82.731	Colobus_angolensis_palliatus
ENSTRUG00000021443	sbds	65	80.982	ENSCGRG00001019886	Sbds	99	80.982	Cricetulus_griseus_chok1gshd
ENSTRUG00000021443	sbds	83	83.010	ENSCGRG00000009211	Sbds	99	83.010	Cricetulus_griseus_crigri
ENSTRUG00000021443	sbds	100	94.779	ENSCSEG00000005798	sbds	100	94.779	Cynoglossus_semilaevis
ENSTRUG00000021443	sbds	100	93.574	ENSCVAG00000001053	sbds	100	93.574	Cyprinodon_variegatus
ENSTRUG00000021443	sbds	100	87.550	ENSDARG00000027803	sbds	99	87.550	Danio_rerio
ENSTRUG00000021443	sbds	100	83.133	ENSDNOG00000041174	SBDS	99	83.133	Dasypus_novemcinctus
ENSTRUG00000021443	sbds	100	84.337	ENSDORG00000026218	Sbds	99	84.337	Dipodomys_ordii
ENSTRUG00000021443	sbds	91	61.842	FBgn0035714	CG8549	99	61.044	Drosophila_melanogaster
ENSTRUG00000021443	sbds	93	59.052	ENSEBUG00000015780	sbds	99	59.052	Eptatretus_burgeri
ENSTRUG00000021443	sbds	100	83.133	ENSEASG00005008821	SBDS	99	83.133	Equus_asinus_asinus
ENSTRUG00000021443	sbds	100	83.133	ENSECAG00000008202	SBDS	99	83.133	Equus_caballus
ENSTRUG00000021443	sbds	84	62.981	ENSEEUG00000004768	SBDS	100	62.981	Erinaceus_europaeus
ENSTRUG00000021443	sbds	100	89.157	ENSELUG00000008382	sbds	99	89.157	Esox_lucius
ENSTRUG00000021443	sbds	100	83.133	ENSFCAG00000022142	SBDS	99	83.133	Felis_catus
ENSTRUG00000021443	sbds	100	85.944	ENSFALG00000013808	SBDS	99	85.944	Ficedula_albicollis
ENSTRUG00000021443	sbds	100	83.936	ENSFDAG00000018947	-	99	83.936	Fukomys_damarensis
ENSTRUG00000021443	sbds	99	90.283	ENSFHEG00000000708	sbds	99	90.283	Fundulus_heteroclitus
ENSTRUG00000021443	sbds	100	89.960	ENSGMOG00000018356	sbds	99	89.960	Gadus_morhua
ENSTRUG00000021443	sbds	100	83.133	ENSGALG00000027989	SBDS	99	83.133	Gallus_gallus
ENSTRUG00000021443	sbds	92	90.000	ENSGAFG00000014204	sbds	100	90.000	Gambusia_affinis
ENSTRUG00000021443	sbds	100	91.968	ENSGACG00000012697	sbds	100	91.968	Gasterosteus_aculeatus
ENSTRUG00000021443	sbds	86	86.385	ENSGAGG00000022402	SBDS	99	86.385	Gopherus_agassizii
ENSTRUG00000021443	sbds	96	64.167	ENSGGOG00000040023	-	92	64.167	Gorilla_gorilla
ENSTRUG00000021443	sbds	100	96.386	ENSHBUG00000002660	sbds	100	96.386	Haplochromis_burtoni
ENSTRUG00000021443	sbds	100	82.329	ENSHGLG00000009671	SBDS	99	82.329	Heterocephalus_glaber_female
ENSTRUG00000021443	sbds	100	82.329	ENSHGLG00100011332	SBDS	99	82.329	Heterocephalus_glaber_male
ENSTRUG00000021443	sbds	100	90.763	ENSHCOG00000018606	sbds	100	90.763	Hippocampus_comes
ENSTRUG00000021443	sbds	100	89.157	ENSIPUG00000006536	sbds	99	89.157	Ictalurus_punctatus
ENSTRUG00000021443	sbds	100	61.508	ENSJJAG00000003934	-	99	61.508	Jaculus_jaculus
ENSTRUG00000021443	sbds	100	80.723	ENSJJAG00000012033	-	99	80.723	Jaculus_jaculus
ENSTRUG00000021443	sbds	100	95.181	ENSKMAG00000018542	sbds	100	95.181	Kryptolebias_marmoratus
ENSTRUG00000021443	sbds	100	91.165	ENSLBEG00000016687	sbds	100	91.165	Labrus_bergylta
ENSTRUG00000021443	sbds	100	72.332	ENSLACG00000018916	SBDS	99	72.332	Latimeria_chalumnae
ENSTRUG00000021443	sbds	100	89.157	ENSLOCG00000004073	sbds	99	89.157	Lepisosteus_oculatus
ENSTRUG00000021443	sbds	100	82.731	ENSLAFG00000008763	SBDS	99	82.731	Loxodonta_africana
ENSTRUG00000021443	sbds	100	83.133	ENSMFAG00000032620	SBDS	99	83.133	Macaca_fascicularis
ENSTRUG00000021443	sbds	100	83.133	ENSMMUG00000045653	SBDS	99	83.133	Macaca_mulatta
ENSTRUG00000021443	sbds	100	83.133	ENSMNEG00000031523	SBDS	99	83.133	Macaca_nemestrina
ENSTRUG00000021443	sbds	100	66.798	ENSMLEG00000036826	SBDS	99	66.798	Mandrillus_leucophaeus
ENSTRUG00000021443	sbds	100	95.984	ENSMAMG00000016062	sbds	100	95.984	Mastacembelus_armatus
ENSTRUG00000021443	sbds	100	96.386	ENSMZEG00005024385	sbds	100	96.386	Maylandia_zebra
ENSTRUG00000021443	sbds	100	83.133	ENSMGAG00000002119	SBDS	99	83.133	Meleagris_gallopavo
ENSTRUG00000021443	sbds	100	67.470	ENSMAUG00000022214	-	100	67.470	Mesocricetus_auratus
ENSTRUG00000021443	sbds	100	83.133	ENSMICG00000014366	SBDS	99	83.133	Microcebus_murinus
ENSTRUG00000021443	sbds	100	83.534	ENSMOCG00000011739	Sbds	99	83.534	Microtus_ochrogaster
ENSTRUG00000021443	sbds	100	83.600	ENSMMOG00000005061	sbds	100	83.600	Mola_mola
ENSTRUG00000021443	sbds	100	84.337	ENSMODG00000006644	SBDS	99	84.337	Monodelphis_domestica
ENSTRUG00000021443	sbds	100	92.369	ENSMALG00000010219	sbds	100	92.369	Monopterus_albus
ENSTRUG00000021443	sbds	100	84.337	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSTRUG00000021443	sbds	100	84.739	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSTRUG00000021443	sbds	100	84.337	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSTRUG00000021443	sbds	100	84.739	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSTRUG00000021443	sbds	67	82.036	ENSMPUG00000016192	SBDS	96	82.036	Mustela_putorius_furo
ENSTRUG00000021443	sbds	73	78.453	ENSMLUG00000013575	SBDS	99	78.453	Myotis_lucifugus
ENSTRUG00000021443	sbds	100	83.534	ENSNGAG00000012093	Sbds	99	83.534	Nannospalax_galili
ENSTRUG00000021443	sbds	100	96.386	ENSNBRG00000017027	sbds	100	96.386	Neolamprologus_brichardi
ENSTRUG00000021443	sbds	100	83.133	ENSNLEG00000013288	SBDS	99	83.133	Nomascus_leucogenys
ENSTRUG00000021443	sbds	100	84.337	ENSOPRG00000008721	SBDS	99	84.337	Ochotona_princeps
ENSTRUG00000021443	sbds	100	74.699	ENSODEG00000019253	-	84	74.699	Octodon_degus
ENSTRUG00000021443	sbds	100	65.863	ENSODEG00000001116	-	99	65.863	Octodon_degus
ENSTRUG00000021443	sbds	100	62.249	ENSODEG00000000137	-	84	65.060	Octodon_degus
ENSTRUG00000021443	sbds	100	95.984	ENSONIG00000005874	sbds	100	95.984	Oreochromis_niloticus
ENSTRUG00000021443	sbds	83	82.524	ENSOANG00000007674	-	99	82.524	Ornithorhynchus_anatinus
ENSTRUG00000021443	sbds	100	85.141	ENSOCUG00000003170	SBDS	99	85.141	Oryctolagus_cuniculus
ENSTRUG00000021443	sbds	100	90.763	ENSORLG00000023489	sbds	100	90.763	Oryzias_latipes
ENSTRUG00000021443	sbds	100	90.361	ENSORLG00020019282	sbds	100	90.361	Oryzias_latipes_hni
ENSTRUG00000021443	sbds	100	90.361	ENSORLG00015008005	sbds	100	90.361	Oryzias_latipes_hsok
ENSTRUG00000021443	sbds	100	92.369	ENSOMEG00000022747	sbds	100	92.369	Oryzias_melastigma
ENSTRUG00000021443	sbds	100	83.534	ENSOGAG00000009011	-	99	83.534	Otolemur_garnettii
ENSTRUG00000021443	sbds	100	71.888	ENSOGAG00000015036	-	99	71.888	Otolemur_garnettii
ENSTRUG00000021443	sbds	100	83.133	ENSOARG00000010609	SBDS	99	83.133	Ovis_aries
ENSTRUG00000021443	sbds	100	82.329	ENSPPAG00000043889	-	99	82.329	Pan_paniscus
ENSTRUG00000021443	sbds	100	83.133	ENSPPRG00000002307	SBDS	99	83.133	Panthera_pardus
ENSTRUG00000021443	sbds	100	83.133	ENSPTIG00000021308	SBDS	99	83.133	Panthera_tigris_altaica
ENSTRUG00000021443	sbds	100	69.478	ENSPTRG00000050835	-	99	69.478	Pan_troglodytes
ENSTRUG00000021443	sbds	87	80.645	ENSPTRG00000048174	-	96	80.645	Pan_troglodytes
ENSTRUG00000021443	sbds	100	83.133	ENSPTRG00000019254	SBDS	99	83.133	Pan_troglodytes
ENSTRUG00000021443	sbds	100	69.478	ENSPTRG00000047744	-	99	69.478	Pan_troglodytes
ENSTRUG00000021443	sbds	100	83.133	ENSPANG00000004078	SBDS	99	83.133	Papio_anubis
ENSTRUG00000021443	sbds	100	90.763	ENSPKIG00000006489	sbds	99	90.763	Paramormyrops_kingsleyae
ENSTRUG00000021443	sbds	83	84.058	ENSPSIG00000014603	SBDS	99	84.058	Pelodiscus_sinensis
ENSTRUG00000021443	sbds	100	95.582	ENSPMGG00000004246	sbds	100	95.582	Periophthalmus_magnuspinnatus
ENSTRUG00000021443	sbds	100	83.534	ENSPEMG00000008728	Sbds	99	83.534	Peromyscus_maniculatus_bairdii
ENSTRUG00000021443	sbds	100	85.141	ENSPCIG00000029718	SBDS	99	85.141	Phascolarctos_cinereus
ENSTRUG00000021443	sbds	100	92.771	ENSPFOG00000015837	sbds	100	92.771	Poecilia_formosa
ENSTRUG00000021443	sbds	100	93.173	ENSPLAG00000003641	sbds	100	93.173	Poecilia_latipinna
ENSTRUG00000021443	sbds	100	92.771	ENSPMEG00000019483	sbds	100	92.771	Poecilia_mexicana
ENSTRUG00000021443	sbds	100	92.771	ENSPREG00000018758	sbds	100	92.771	Poecilia_reticulata
ENSTRUG00000021443	sbds	100	83.133	ENSPPYG00000017513	SBDS	99	83.133	Pongo_abelii
ENSTRUG00000021443	sbds	100	82.731	ENSPCOG00000021098	SBDS	99	82.731	Propithecus_coquereli
ENSTRUG00000021443	sbds	100	83.534	ENSPVAG00000009369	SBDS	99	83.534	Pteropus_vampyrus
ENSTRUG00000021443	sbds	100	95.984	ENSPNYG00000022403	sbds	100	95.984	Pundamilia_nyererei
ENSTRUG00000021443	sbds	100	91.968	ENSPNAG00000001120	sbds	99	91.968	Pygocentrus_nattereri
ENSTRUG00000021443	sbds	100	84.337	ENSRNOG00000000888	Sbds	99	84.337	Rattus_norvegicus
ENSTRUG00000021443	sbds	100	83.133	ENSRBIG00000035557	SBDS	99	83.133	Rhinopithecus_bieti
ENSTRUG00000021443	sbds	100	69.076	ENSRROG00000041986	-	99	69.076	Rhinopithecus_roxellana
ENSTRUG00000021443	sbds	100	83.133	ENSRROG00000040842	-	99	83.133	Rhinopithecus_roxellana
ENSTRUG00000021443	sbds	92	43.460	YLR022C	-	94	43.460	Saccharomyces_cerevisiae
ENSTRUG00000021443	sbds	93	81.385	ENSSBOG00000022460	SBDS	99	81.385	Saimiri_boliviensis_boliviensis
ENSTRUG00000021443	sbds	100	72.691	ENSSHAG00000010263	SBDS	99	72.691	Sarcophilus_harrisii
ENSTRUG00000021443	sbds	100	91.165	ENSSFOG00015001108	sbds	99	91.165	Scleropages_formosus
ENSTRUG00000021443	sbds	100	95.181	ENSSMAG00000020506	sbds	100	95.181	Scophthalmus_maximus
ENSTRUG00000021443	sbds	100	95.181	ENSSDUG00000001528	sbds	100	95.181	Seriola_dumerili
ENSTRUG00000021443	sbds	100	95.582	ENSSLDG00000003659	sbds	100	95.582	Seriola_lalandi_dorsalis
ENSTRUG00000021443	sbds	73	90.698	ENSSARG00000001899	-	73	90.698	Sorex_araneus
ENSTRUG00000021443	sbds	61	88.235	ENSSARG00000013132	-	100	88.235	Sorex_araneus
ENSTRUG00000021443	sbds	100	83.936	ENSSPUG00000002699	SBDS	99	83.936	Sphenodon_punctatus
ENSTRUG00000021443	sbds	100	97.189	ENSSPAG00000016419	sbds	100	89.200	Stegastes_partitus
ENSTRUG00000021443	sbds	100	83.133	ENSSSCG00000007732	SBDS	99	83.133	Sus_scrofa
ENSTRUG00000021443	sbds	66	84.756	ENSTGUG00000003426	SBDS	99	84.756	Taeniopygia_guttata
ENSTRUG00000021443	sbds	100	97.189	ENSTNIG00000019000	sbds	100	97.189	Tetraodon_nigroviridis
ENSTRUG00000021443	sbds	84	71.154	ENSTBEG00000001178	SBDS	100	71.154	Tupaia_belangeri
ENSTRUG00000021443	sbds	100	65.060	ENSTTRG00000003921	SBDS	99	65.060	Tursiops_truncatus
ENSTRUG00000021443	sbds	100	83.133	ENSUAMG00000001326	SBDS	99	83.133	Ursus_americanus
ENSTRUG00000021443	sbds	100	83.133	ENSUMAG00000015353	SBDS	99	83.133	Ursus_maritimus
ENSTRUG00000021443	sbds	100	83.133	ENSVVUG00000016478	SBDS	99	83.133	Vulpes_vulpes
ENSTRUG00000021443	sbds	100	85.542	ENSXETG00000010093	sbds	99	85.542	Xenopus_tropicalis
ENSTRUG00000021443	sbds	100	83.133	ENSXCOG00000010639	sbds	100	83.133	Xiphophorus_couchianus
ENSTRUG00000021443	sbds	100	92.771	ENSXMAG00000006065	sbds	100	92.771	Xiphophorus_maculatus