EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000021529 (Gene tree)
Gene ID: 101061509
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4383 bases
Position: chr15:353041-357423
Accession: 101061509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052207	RNase_T	PF00929.24	9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052059	-	2304	XM_003970717	ENSTRUP00000052207	268 (aa)	XP_003970766	UPI0005D2018D

Gene Model

Click here to download ENSTRUG00000021529's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021529	smfn	66	82.022	ENSG00000076043	REXO2	98	76.757	Homo_sapiens
ENSTRUG00000021529	smfn	82	69.643	ENSAMEG00000013263	REXO2	95	70.089	Ailuropoda_melanoleuca
ENSTRUG00000021529	smfn	68	84.699	ENSACIG00000023553	smfn	99	84.699	Amphilophus_citrinellus
ENSTRUG00000021529	smfn	76	83.173	ENSAPEG00000012435	smfn	72	84.694	Amphiprion_percula
ENSTRUG00000021529	smfn	82	78.027	ENSATEG00000015385	smfn	77	77.578	Anabas_testudineus
ENSTRUG00000021529	smfn	70	75.916	ENSAPLG00000005045	REXO2	93	75.916	Anas_platyrhynchos
ENSTRUG00000021529	smfn	67	74.444	ENSACAG00000011631	REXO2	84	74.444	Anolis_carolinensis
ENSTRUG00000021529	smfn	82	69.643	ENSANAG00000020834	REXO2	82	77.835	Aotus_nancymaae
ENSTRUG00000021529	smfn	75	82.673	ENSACLG00000024566	smfn	95	85.475	Astatotilapia_calliptera
ENSTRUG00000021529	smfn	72	76.650	ENSBTAG00000005843	REXO2	82	77.320	Bos_taurus
ENSTRUG00000021529	smfn	68	47.541	WBGene00007429	C08B6.8	96	54.667	Caenorhabditis_elegans
ENSTRUG00000021529	smfn	82	69.196	ENSCJAG00000012434	REXO2	82	77.320	Callithrix_jacchus
ENSTRUG00000021529	smfn	82	68.750	ENSCAFG00000013511	REXO2	82	76.289	Canis_familiaris
ENSTRUG00000021529	smfn	82	69.643	ENSCAFG00020002513	REXO2	82	77.320	Canis_lupus_dingo
ENSTRUG00000021529	smfn	82	69.196	ENSCHIG00000009264	REXO2	82	77.320	Capra_hircus
ENSTRUG00000021529	smfn	70	65.789	ENSTSYG00000027948	-	97	66.316	Carlito_syrichta
ENSTRUG00000021529	smfn	72	77.157	ENSTSYG00000002237	REXO2	82	77.835	Carlito_syrichta
ENSTRUG00000021529	smfn	68	76.757	ENSCAPG00000006093	REXO2	98	77.297	Cavia_aperea
ENSTRUG00000021529	smfn	72	77.157	ENSCPOG00000010548	REXO2	82	77.835	Cavia_porcellus
ENSTRUG00000021529	smfn	82	69.643	ENSCCAG00000034979	REXO2	82	77.835	Cebus_capucinus
ENSTRUG00000021529	smfn	66	82.022	ENSCATG00000015278	REXO2	82	77.320	Cercocebus_atys
ENSTRUG00000021529	smfn	72	77.157	ENSCLAG00000011195	REXO2	82	77.835	Chinchilla_lanigera
ENSTRUG00000021529	smfn	66	82.022	ENSCSAG00000002754	REXO2	82	77.320	Chlorocebus_sabaeus
ENSTRUG00000021529	smfn	82	67.857	ENSCHOG00000000642	-	95	68.304	Choloepus_hoffmanni
ENSTRUG00000021529	smfn	52	69.014	ENSCPBG00000009359	REXO2	98	69.014	Chrysemys_picta_bellii
ENSTRUG00000021529	smfn	73	57.143	ENSCING00000009858	-	84	61.143	Ciona_intestinalis
ENSTRUG00000021529	smfn	66	82.022	ENSCANG00000034756	REXO2	82	77.320	Colobus_angolensis_palliatus
ENSTRUG00000021529	smfn	72	74.112	ENSCGRG00001010922	-	95	74.742	Cricetulus_griseus_chok1gshd
ENSTRUG00000021529	smfn	72	75.635	ENSCGRG00001013673	-	95	76.289	Cricetulus_griseus_chok1gshd
ENSTRUG00000021529	smfn	82	69.196	ENSCGRG00001019814	-	82	77.320	Cricetulus_griseus_chok1gshd
ENSTRUG00000021529	smfn	82	69.196	ENSCGRG00000006235	Rexo2	82	77.320	Cricetulus_griseus_crigri
ENSTRUG00000021529	smfn	99	63.899	ENSCSEG00000007214	smfn	97	64.000	Cynoglossus_semilaevis
ENSTRUG00000021529	smfn	68	80.769	ENSCVAG00000012008	smfn	98	80.769	Cyprinodon_variegatus
ENSTRUG00000021529	smfn	72	77.835	ENSDARG00000009806	smfn	73	79.255	Danio_rerio
ENSTRUG00000021529	smfn	72	75.258	ENSDNOG00000046533	REXO2	95	74.372	Dasypus_novemcinctus
ENSTRUG00000021529	smfn	84	69.163	ENSDORG00000011255	Rexo2	96	69.604	Dipodomys_ordii
ENSTRUG00000021529	smfn	71	58.854	ENSDORG00000025142	-	81	60.428	Dipodomys_ordii
ENSTRUG00000021529	smfn	71	51.042	FBgn0039115	CG10214	82	54.023	Drosophila_melanogaster
ENSTRUG00000021529	smfn	66	74.719	ENSEBUG00000013964	REXO2	60	75.000	Eptatretus_burgeri
ENSTRUG00000021529	smfn	72	76.650	ENSEASG00005006674	REXO2	82	77.320	Equus_asinus_asinus
ENSTRUG00000021529	smfn	72	76.650	ENSECAG00000005988	REXO2	82	77.320	Equus_caballus
ENSTRUG00000021529	smfn	81	71.239	ENSELUG00000020072	smfn	67	77.949	Esox_lucius
ENSTRUG00000021529	smfn	82	69.196	ENSFCAG00000018632	REXO2	82	77.320	Felis_catus
ENSTRUG00000021529	smfn	68	75.269	ENSFALG00000010044	REXO2	92	75.269	Ficedula_albicollis
ENSTRUG00000021529	smfn	72	77.157	ENSFDAG00000011764	REXO2	82	77.835	Fukomys_damarensis
ENSTRUG00000021529	smfn	69	80.000	ENSGMOG00000006370	smfn	91	81.818	Gadus_morhua
ENSTRUG00000021529	smfn	71	77.320	ENSGALG00000035980	REXO2	83	77.320	Gallus_gallus
ENSTRUG00000021529	smfn	80	79.358	ENSGAFG00000015349	smfn	78	79.358	Gambusia_affinis
ENSTRUG00000021529	smfn	71	80.829	ENSGACG00000020096	smfn	93	82.353	Gasterosteus_aculeatus
ENSTRUG00000021529	smfn	73	75.377	ENSGAGG00000021126	REXO2	84	77.202	Gopherus_agassizii
ENSTRUG00000021529	smfn	66	82.022	ENSGGOG00000023267	REXO2	82	77.320	Gorilla_gorilla
ENSTRUG00000021529	smfn	75	59.406	ENSHBUG00000020097	REXO2	63	84.375	Haplochromis_burtoni
ENSTRUG00000021529	smfn	74	75.124	ENSHGLG00000013556	REXO2	82	77.320	Heterocephalus_glaber_female
ENSTRUG00000021529	smfn	74	75.622	ENSHGLG00100005257	REXO2	82	77.835	Heterocephalus_glaber_male
ENSTRUG00000021529	smfn	66	79.661	ENSHCOG00000007122	smfn	98	79.661	Hippocampus_comes
ENSTRUG00000021529	smfn	73	78.283	ENSIPUG00000020440	rexo2	77	76.442	Ictalurus_punctatus
ENSTRUG00000021529	smfn	82	70.089	ENSSTOG00000012465	REXO2	82	77.835	Ictidomys_tridecemlineatus
ENSTRUG00000021529	smfn	82	69.643	ENSJJAG00000013710	-	82	77.835	Jaculus_jaculus
ENSTRUG00000021529	smfn	82	50.446	ENSJJAG00000022605	-	77	54.639	Jaculus_jaculus
ENSTRUG00000021529	smfn	84	72.926	ENSKMAG00000016795	smfn	81	73.362	Kryptolebias_marmoratus
ENSTRUG00000021529	smfn	68	79.891	ENSLBEG00000006021	smfn	97	79.891	Labrus_bergylta
ENSTRUG00000021529	smfn	73	69.192	ENSLACG00000018623	REXO2	78	71.429	Latimeria_chalumnae
ENSTRUG00000021529	smfn	76	76.699	ENSLOCG00000002389	smfn	92	79.381	Lepisosteus_oculatus
ENSTRUG00000021529	smfn	72	76.650	ENSLAFG00000012451	REXO2	82	77.320	Loxodonta_africana
ENSTRUG00000021529	smfn	66	82.022	ENSMFAG00000041155	REXO2	82	77.320	Macaca_fascicularis
ENSTRUG00000021529	smfn	66	82.022	ENSMMUG00000012269	REXO2	82	77.320	Macaca_mulatta
ENSTRUG00000021529	smfn	66	82.022	ENSMNEG00000033379	REXO2	82	77.320	Macaca_nemestrina
ENSTRUG00000021529	smfn	66	82.022	ENSMLEG00000036571	REXO2	82	77.320	Mandrillus_leucophaeus
ENSTRUG00000021529	smfn	82	80.717	ENSMAMG00000021209	smfn	78	80.269	Mastacembelus_armatus
ENSTRUG00000021529	smfn	75	82.673	ENSMZEG00005023224	-	78	82.673	Maylandia_zebra
ENSTRUG00000021529	smfn	75	82.673	ENSMZEG00005020730	REXO2	78	82.673	Maylandia_zebra
ENSTRUG00000021529	smfn	58	74.375	ENSMGAG00000003026	REXO2	98	74.375	Meleagris_gallopavo
ENSTRUG00000021529	smfn	82	69.196	ENSMAUG00000014576	Rexo2	82	77.320	Mesocricetus_auratus
ENSTRUG00000021529	smfn	72	77.157	ENSMICG00000010094	REXO2	82	77.835	Microcebus_murinus
ENSTRUG00000021529	smfn	72	77.157	ENSMOCG00000009016	Rexo2	82	77.320	Microtus_ochrogaster
ENSTRUG00000021529	smfn	76	82.212	ENSMMOG00000006430	smfn	77	82.212	Mola_mola
ENSTRUG00000021529	smfn	72	79.188	ENSMODG00000013913	REXO2	82	79.381	Monodelphis_domestica
ENSTRUG00000021529	smfn	81	78.636	ENSMALG00000018130	smfn	63	77.727	Monopterus_albus
ENSTRUG00000021529	smfn	84	68.722	MGP_CAROLIEiJ_G0032166	Rexo2	96	69.163	Mus_caroli
ENSTRUG00000021529	smfn	84	68.282	ENSMUSG00000032026	Rexo2	96	68.722	Mus_musculus
ENSTRUG00000021529	smfn	84	68.282	MGP_PahariEiJ_G0015034	Rexo2	96	68.722	Mus_pahari
ENSTRUG00000021529	smfn	84	68.282	MGP_SPRETEiJ_G0033305	Rexo2	96	68.722	Mus_spretus
ENSTRUG00000021529	smfn	72	76.650	ENSMPUG00000003947	REXO2	82	77.320	Mustela_putorius_furo
ENSTRUG00000021529	smfn	84	67.982	ENSMLUG00000009030	REXO2	82	76.804	Myotis_lucifugus
ENSTRUG00000021529	smfn	72	77.157	ENSNGAG00000008819	Rexo2	95	77.835	Nannospalax_galili
ENSTRUG00000021529	smfn	66	84.916	ENSNBRG00000006529	smfn	95	84.916	Neolamprologus_brichardi
ENSTRUG00000021529	smfn	66	82.022	ENSNLEG00000029745	REXO2	82	77.320	Nomascus_leucogenys
ENSTRUG00000021529	smfn	72	78.680	ENSMEUG00000011558	REXO2	89	78.866	Notamacropus_eugenii
ENSTRUG00000021529	smfn	65	66.474	ENSODEG00000016046	-	84	66.471	Octodon_degus
ENSTRUG00000021529	smfn	68	76.757	ENSODEG00000009750	-	98	77.297	Octodon_degus
ENSTRUG00000021529	smfn	85	76.856	ENSONIG00000001954	smfn	87	83.663	Oreochromis_niloticus
ENSTRUG00000021529	smfn	72	77.157	ENSOANG00000001754	REXO2	82	77.835	Ornithorhynchus_anatinus
ENSTRUG00000021529	smfn	72	77.157	ENSOCUG00000004274	REXO2	78	77.835	Oryctolagus_cuniculus
ENSTRUG00000021529	smfn	73	79.397	ENSORLG00000005119	smfn	63	79.381	Oryzias_latipes
ENSTRUG00000021529	smfn	73	79.899	ENSORLG00020010121	smfn	63	80.311	Oryzias_latipes_hni
ENSTRUG00000021529	smfn	73	80.402	ENSORLG00015015699	smfn	63	80.412	Oryzias_latipes_hsok
ENSTRUG00000021529	smfn	73	78.894	ENSOMEG00000016878	REXO2	71	78.866	Oryzias_melastigma
ENSTRUG00000021529	smfn	52	75.352	ENSOMEG00000008940	-	99	75.352	Oryzias_melastigma
ENSTRUG00000021529	smfn	72	77.157	ENSOGAG00000016860	REXO2	82	77.835	Otolemur_garnettii
ENSTRUG00000021529	smfn	72	76.650	ENSOARG00000001040	REXO2	91	77.320	Ovis_aries
ENSTRUG00000021529	smfn	66	82.022	ENSPPAG00000039849	REXO2	82	77.320	Pan_paniscus
ENSTRUG00000021529	smfn	82	69.196	ENSPPRG00000007255	REXO2	82	77.320	Panthera_pardus
ENSTRUG00000021529	smfn	68	76.216	ENSPTIG00000015578	REXO2	98	76.757	Panthera_tigris_altaica
ENSTRUG00000021529	smfn	66	82.022	ENSPTRG00000004306	REXO2	82	77.320	Pan_troglodytes
ENSTRUG00000021529	smfn	66	82.022	ENSPANG00000010675	REXO2	82	77.320	Papio_anubis
ENSTRUG00000021529	smfn	90	63.806	ENSPKIG00000000911	smfn	77	83.784	Paramormyrops_kingsleyae
ENSTRUG00000021529	smfn	72	78.173	ENSPSIG00000005151	REXO2	71	78.351	Pelodiscus_sinensis
ENSTRUG00000021529	smfn	68	80.000	ENSPMGG00000007442	smfn	98	80.000	Periophthalmus_magnuspinnatus
ENSTRUG00000021529	smfn	82	55.804	ENSPEMG00000001421	Rexo2	81	61.856	Peromyscus_maniculatus_bairdii
ENSTRUG00000021529	smfn	72	79.188	ENSPCIG00000011227	REXO2	52	79.381	Phascolarctos_cinereus
ENSTRUG00000021529	smfn	82	77.876	ENSPFOG00000017861	smfn	96	82.474	Poecilia_formosa
ENSTRUG00000021529	smfn	72	79.487	ENSPLAG00000007327	REXO2	74	79.487	Poecilia_latipinna
ENSTRUG00000021529	smfn	79	80.184	ENSPMEG00000017343	smfn	78	80.184	Poecilia_mexicana
ENSTRUG00000021529	smfn	79	79.724	ENSPREG00000016438	smfn	78	79.724	Poecilia_reticulata
ENSTRUG00000021529	smfn	66	82.022	ENSPPYG00000003895	REXO2	82	77.320	Pongo_abelii
ENSTRUG00000021529	smfn	72	76.142	ENSPCAG00000005237	REXO2	82	76.804	Procavia_capensis
ENSTRUG00000021529	smfn	59	83.544	ENSPCOG00000027639	REXO2	79	83.871	Propithecus_coquereli
ENSTRUG00000021529	smfn	84	57.391	ENSPVAG00000005295	REXO2	96	57.826	Pteropus_vampyrus
ENSTRUG00000021529	smfn	75	82.178	ENSPNYG00000018401	smfn	78	82.178	Pundamilia_nyererei
ENSTRUG00000021529	smfn	72	77.665	ENSPNAG00000005290	smfn	97	64.906	Pygocentrus_nattereri
ENSTRUG00000021529	smfn	84	68.282	ENSRNOG00000018939	Rexo2	96	68.722	Rattus_norvegicus
ENSTRUG00000021529	smfn	66	82.022	ENSRBIG00000037809	REXO2	82	77.320	Rhinopithecus_bieti
ENSTRUG00000021529	smfn	66	82.022	ENSRROG00000038928	REXO2	82	77.320	Rhinopithecus_roxellana
ENSTRUG00000021529	smfn	75	42.788	YLR059C	REX2	73	45.685	Saccharomyces_cerevisiae
ENSTRUG00000021529	smfn	82	69.643	ENSSBOG00000028651	REXO2	82	77.835	Saimiri_boliviensis_boliviensis
ENSTRUG00000021529	smfn	72	79.188	ENSSHAG00000008008	REXO2	83	79.381	Sarcophilus_harrisii
ENSTRUG00000021529	smfn	68	78.495	ENSSFOG00015022414	smfn	99	78.495	Scleropages_formosus
ENSTRUG00000021529	smfn	79	78.802	ENSSMAG00000003168	smfn	79	78.341	Scophthalmus_maximus
ENSTRUG00000021529	smfn	99	69.259	ENSSDUG00000015624	smfn	91	68.519	Seriola_dumerili
ENSTRUG00000021529	smfn	99	69.145	ENSSLDG00000014005	smfn	90	69.145	Seriola_lalandi_dorsalis
ENSTRUG00000021529	smfn	57	70.701	ENSSPUG00000006005	REXO2	84	70.701	Sphenodon_punctatus
ENSTRUG00000021529	smfn	68	85.561	ENSSPAG00000001530	smfn	100	85.561	Stegastes_partitus
ENSTRUG00000021529	smfn	82	69.196	ENSSSCG00000015056	REXO2	82	77.320	Sus_scrofa
ENSTRUG00000021529	smfn	72	74.619	ENSTGUG00000000121	REXO2	83	74.872	Taeniopygia_guttata
ENSTRUG00000021529	smfn	84	81.498	ENSTNIG00000008588	smfn	100	81.498	Tetraodon_nigroviridis
ENSTRUG00000021529	smfn	72	77.157	ENSTBEG00000017040	REXO2	82	77.835	Tupaia_belangeri
ENSTRUG00000021529	smfn	82	68.750	ENSTTRG00000014928	REXO2	82	76.804	Tursiops_truncatus
ENSTRUG00000021529	smfn	82	64.159	ENSUAMG00000019096	REXO2	95	73.514	Ursus_americanus
ENSTRUG00000021529	smfn	82	69.643	ENSUMAG00000003770	REXO2	82	77.320	Ursus_maritimus
ENSTRUG00000021529	smfn	62	62.651	ENSVPAG00000006301	REXO2	91	61.765	Vicugna_pacos
ENSTRUG00000021529	smfn	82	69.643	ENSVVUG00000025223	REXO2	82	77.320	Vulpes_vulpes
ENSTRUG00000021529	smfn	72	77.157	ENSXETG00000012648	rexo2	78	78.534	Xenopus_tropicalis
ENSTRUG00000021529	smfn	71	77.604	ENSXCOG00000018838	smfn	94	80.000	Xiphophorus_couchianus
ENSTRUG00000021529	smfn	88	71.250	ENSXMAG00000021125	smfn	75	71.250	Xiphophorus_maculatus