EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000021596 (Gene tree)
Gene ID: 101075264
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4873 bases
Position: chr21:9504064-9508936
Accession: 101075264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000056723	Glu-tRNAGln	PF02686.15	7.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057640	-	4423	XM_011615745	ENSTRUP00000056723	198 (aa)	XP_011614047	UPI0005D28EDB

Gene Model

Click here to download ENSTRUG00000021596's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00970	Aminoacyl-tRNA biosynthesis	KEGG
tru01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021596	gatc	51	60.000	ENSG00000257218	GATC	100	68.085	Homo_sapiens
ENSTRUG00000021596	gatc	51	58.000	ENSAMEG00000013298	-	74	58.000	Ailuropoda_melanoleuca
ENSTRUG00000021596	gatc	63	84.000	ENSAOCG00000014641	gatc	100	84.000	Amphiprion_ocellaris
ENSTRUG00000021596	gatc	96	63.590	ENSAPEG00000023411	gatc	100	63.590	Amphiprion_percula
ENSTRUG00000021596	gatc	53	67.619	ENSACAG00000002868	-	78	67.619	Anolis_carolinensis
ENSTRUG00000021596	gatc	51	61.000	ENSANAG00000034389	-	74	61.000	Aotus_nancymaae
ENSTRUG00000021596	gatc	96	63.590	ENSACLG00000026251	gatc	100	63.590	Astatotilapia_calliptera
ENSTRUG00000021596	gatc	83	66.061	ENSAMXG00000004252	gatc	60	75.735	Astyanax_mexicanus
ENSTRUG00000021596	gatc	60	38.983	WBGene00013433	Y66D12A.7	67	38.983	Caenorhabditis_elegans
ENSTRUG00000021596	gatc	51	60.000	ENSCAFG00000010311	-	74	60.000	Canis_familiaris
ENSTRUG00000021596	gatc	51	60.000	ENSCAFG00020020606	-	74	60.000	Canis_lupus_dingo
ENSTRUG00000021596	gatc	51	61.000	ENSTSYG00000006845	-	70	64.211	Carlito_syrichta
ENSTRUG00000021596	gatc	51	61.000	ENSCCAG00000022235	-	70	64.211	Cebus_capucinus
ENSTRUG00000021596	gatc	51	60.000	ENSCATG00000038807	GATC	70	63.158	Cercocebus_atys
ENSTRUG00000021596	gatc	51	61.000	ENSCSAG00000002259	GATC	74	61.000	Chlorocebus_sabaeus
ENSTRUG00000021596	gatc	52	59.804	ENSCHOG00000009235	-	71	62.887	Choloepus_hoffmanni
ENSTRUG00000021596	gatc	65	59.690	ENSCPBG00000011342	-	68	59.690	Chrysemys_picta_bellii
ENSTRUG00000021596	gatc	67	48.551	ENSCGRG00001019220	-	61	60.000	Cricetulus_griseus_chok1gshd
ENSTRUG00000021596	gatc	67	48.551	ENSCGRG00000004184	-	61	60.000	Cricetulus_griseus_crigri
ENSTRUG00000021596	gatc	56	74.545	ENSCSEG00000016618	-	64	74.545	Cynoglossus_semilaevis
ENSTRUG00000021596	gatc	95	60.000	ENSCSEG00000007798	gatc	65	75.385	Cynoglossus_semilaevis
ENSTRUG00000021596	gatc	85	71.598	ENSCVAG00000004364	gatc	72	81.022	Cyprinodon_variegatus
ENSTRUG00000021596	gatc	69	75.000	ENSDARG00000056855	gatc	72	75.940	Danio_rerio
ENSTRUG00000021596	gatc	59	41.322	FBgn0064115	GatC	78	41.322	Drosophila_melanogaster
ENSTRUG00000021596	gatc	60	47.500	ENSETEG00000002604	-	79	47.500	Echinops_telfairi
ENSTRUG00000021596	gatc	50	56.566	ENSEEUG00000011638	-	73	56.566	Erinaceus_europaeus
ENSTRUG00000021596	gatc	83	57.396	ENSELUG00000012608	gatc	75	75.728	Esox_lucius
ENSTRUG00000021596	gatc	51	58.000	ENSFCAG00000038718	-	74	58.000	Felis_catus
ENSTRUG00000021596	gatc	66	51.908	ENSFALG00000007564	-	82	51.908	Ficedula_albicollis
ENSTRUG00000021596	gatc	53	59.615	ENSFDAG00000018720	-	76	59.615	Fukomys_damarensis
ENSTRUG00000021596	gatc	77	74.510	ENSFHEG00000014992	GATC	74	81.022	Fundulus_heteroclitus
ENSTRUG00000021596	gatc	69	70.588	ENSGMOG00000008742	gatc	84	70.588	Gadus_morhua
ENSTRUG00000021596	gatc	54	56.604	ENSGALG00000007195	-	79	54.955	Gallus_gallus
ENSTRUG00000021596	gatc	60	81.356	ENSGAFG00000012801	gatc	75	81.356	Gambusia_affinis
ENSTRUG00000021596	gatc	96	64.103	ENSGACG00000008973	gatc	100	64.103	Gasterosteus_aculeatus
ENSTRUG00000021596	gatc	65	61.240	ENSGAGG00000016018	-	70	61.240	Gopherus_agassizii
ENSTRUG00000021596	gatc	96	64.103	ENSHBUG00000006827	gatc	100	64.103	Haplochromis_burtoni
ENSTRUG00000021596	gatc	53	59.048	ENSHGLG00000011394	GATC	77	59.048	Heterocephalus_glaber_female
ENSTRUG00000021596	gatc	53	57.143	ENSHGLG00100018850	-	77	57.143	Heterocephalus_glaber_male
ENSTRUG00000021596	gatc	65	77.344	ENSHCOG00000009209	gatc	100	77.344	Hippocampus_comes
ENSTRUG00000021596	gatc	65	77.519	ENSIPUG00000023072	gatc	60	77.692	Ictalurus_punctatus
ENSTRUG00000021596	gatc	65	74.419	ENSKMAG00000016476	gatc	99	74.419	Kryptolebias_marmoratus
ENSTRUG00000021596	gatc	69	75.182	ENSLBEG00000007603	gatc	76	75.182	Labrus_bergylta
ENSTRUG00000021596	gatc	80	51.852	ENSLACG00000018239	-	67	59.231	Latimeria_chalumnae
ENSTRUG00000021596	gatc	65	71.318	ENSLOCG00000004056	gatc	70	71.318	Lepisosteus_oculatus
ENSTRUG00000021596	gatc	68	52.518	ENSLAFG00000006384	-	80	55.738	Loxodonta_africana
ENSTRUG00000021596	gatc	51	60.000	ENSMFAG00000034197	GATC	70	63.158	Macaca_fascicularis
ENSTRUG00000021596	gatc	51	60.000	ENSMMUG00000046665	GATC	70	63.158	Macaca_mulatta
ENSTRUG00000021596	gatc	51	60.000	ENSMNEG00000034653	GATC	70	63.158	Macaca_nemestrina
ENSTRUG00000021596	gatc	51	61.000	ENSMLEG00000039862	GATC	74	61.000	Mandrillus_leucophaeus
ENSTRUG00000021596	gatc	73	80.000	ENSMAMG00000015851	gatc	77	81.560	Mastacembelus_armatus
ENSTRUG00000021596	gatc	96	63.590	ENSMZEG00005016072	gatc	100	63.590	Maylandia_zebra
ENSTRUG00000021596	gatc	54	58.491	ENSMGAG00000008733	-	100	58.491	Meleagris_gallopavo
ENSTRUG00000021596	gatc	67	49.306	ENSMOCG00000005051	Gatc	82	51.128	Microtus_ochrogaster
ENSTRUG00000021596	gatc	56	82.727	ENSMMOG00000017695	gatc	92	82.727	Mola_mola
ENSTRUG00000021596	gatc	57	57.143	MGP_CAROLIEiJ_G0027623	Gatc	68	57.143	Mus_caroli
ENSTRUG00000021596	gatc	57	57.143	ENSMUSG00000029536	Gatc	68	57.143	Mus_musculus
ENSTRUG00000021596	gatc	57	56.250	MGP_SPRETEiJ_G0028621	Gatc	68	56.250	Mus_spretus
ENSTRUG00000021596	gatc	51	59.000	ENSMPUG00000003183	-	74	59.000	Mustela_putorius_furo
ENSTRUG00000021596	gatc	96	64.615	ENSNBRG00000007810	gatc	100	64.615	Neolamprologus_brichardi
ENSTRUG00000021596	gatc	55	57.798	ENSNLEG00000015651	GATC	74	62.000	Nomascus_leucogenys
ENSTRUG00000021596	gatc	53	58.654	ENSMEUG00000004064	-	92	56.140	Notamacropus_eugenii
ENSTRUG00000021596	gatc	70	73.571	ENSONIG00000013444	gatc	97	73.571	Oreochromis_niloticus
ENSTRUG00000021596	gatc	61	76.033	ENSORLG00000007156	gatc	100	76.033	Oryzias_latipes
ENSTRUG00000021596	gatc	69	72.993	ENSORLG00020014991	gatc	73	72.993	Oryzias_latipes_hni
ENSTRUG00000021596	gatc	69	72.263	ENSORLG00015003450	gatc	73	72.263	Oryzias_latipes_hsok
ENSTRUG00000021596	gatc	96	60.204	ENSOMEG00000002280	gatc	73	73.723	Oryzias_melastigma
ENSTRUG00000021596	gatc	53	58.095	ENSOGAG00000003850	-	96	58.095	Otolemur_garnettii
ENSTRUG00000021596	gatc	51	60.000	ENSPPAG00000029164	GATC	70	63.158	Pan_paniscus
ENSTRUG00000021596	gatc	51	58.000	ENSPPRG00000000929	-	74	58.000	Panthera_pardus
ENSTRUG00000021596	gatc	51	58.000	ENSPTIG00000009889	-	74	58.000	Panthera_tigris_altaica
ENSTRUG00000021596	gatc	51	60.000	ENSPTRG00000049887	GATC	70	63.158	Pan_troglodytes
ENSTRUG00000021596	gatc	67	70.455	ENSPKIG00000024856	gatc	68	70.455	Paramormyrops_kingsleyae
ENSTRUG00000021596	gatc	56	61.261	ENSPSIG00000011112	-	95	61.261	Pelodiscus_sinensis
ENSTRUG00000021596	gatc	75	70.270	ENSPMGG00000018829	gatc	80	79.365	Periophthalmus_magnuspinnatus
ENSTRUG00000021596	gatc	69	81.022	ENSPFOG00000011603	gatc	74	81.022	Poecilia_formosa
ENSTRUG00000021596	gatc	69	80.292	ENSPLAG00000002471	gatc	74	80.292	Poecilia_latipinna
ENSTRUG00000021596	gatc	69	80.292	ENSPMEG00000020958	gatc	74	80.292	Poecilia_mexicana
ENSTRUG00000021596	gatc	56	87.273	ENSPREG00000022256	gatc	76	85.217	Poecilia_reticulata
ENSTRUG00000021596	gatc	53	58.095	ENSPPYG00000005030	GATC	77	58.095	Pongo_abelii
ENSTRUG00000021596	gatc	53	58.491	ENSPCAG00000013864	-	78	58.491	Procavia_capensis
ENSTRUG00000021596	gatc	50	62.626	ENSPVAG00000002228	-	73	62.626	Pteropus_vampyrus
ENSTRUG00000021596	gatc	96	64.615	ENSPNYG00000016015	gatc	100	64.615	Pundamilia_nyererei
ENSTRUG00000021596	gatc	67	73.485	ENSPNAG00000001239	gatc	59	73.485	Pygocentrus_nattereri
ENSTRUG00000021596	gatc	56	57.273	ENSRNOG00000045621	Gatc	68	57.273	Rattus_norvegicus
ENSTRUG00000021596	gatc	57	59.821	ENSRNOG00000001161	Gatc	68	59.821	Rattus_norvegicus
ENSTRUG00000021596	gatc	51	59.000	ENSRBIG00000033363	GATC	70	62.105	Rhinopithecus_bieti
ENSTRUG00000021596	gatc	51	59.000	ENSRROG00000042802	GATC	70	62.105	Rhinopithecus_roxellana
ENSTRUG00000021596	gatc	51	59.000	ENSSBOG00000033750	-	70	62.105	Saimiri_boliviensis_boliviensis
ENSTRUG00000021596	gatc	51	61.000	ENSSHAG00000005745	-	92	62.887	Sarcophilus_harrisii
ENSTRUG00000021596	gatc	62	71.311	ENSSFOG00015002508	gatc	70	74.775	Scleropages_formosus
ENSTRUG00000021596	gatc	96	67.539	ENSSMAG00000014280	gatc	100	66.492	Scophthalmus_maximus
ENSTRUG00000021596	gatc	96	62.626	ENSSDUG00000012206	gatc	71	77.536	Seriola_dumerili
ENSTRUG00000021596	gatc	96	63.590	ENSSLDG00000025159	gatc	98	63.590	Seriola_lalandi_dorsalis
ENSTRUG00000021596	gatc	63	54.545	ENSSPUG00000015693	-	89	55.285	Sphenodon_punctatus
ENSTRUG00000021596	gatc	96	63.184	ENSSPAG00000011860	gatc	100	62.687	Stegastes_partitus
ENSTRUG00000021596	gatc	50	62.626	ENSSSCG00000032747	-	69	64.211	Sus_scrofa
ENSTRUG00000021596	gatc	54	61.682	ENSTGUG00000009561	-	99	61.682	Taeniopygia_guttata
ENSTRUG00000021596	gatc	89	82.486	ENSTNIG00000015879	gatc	86	82.486	Tetraodon_nigroviridis
ENSTRUG00000021596	gatc	51	60.000	ENSTTRG00000000144	GATC	74	60.000	Tursiops_truncatus
ENSTRUG00000021596	gatc	51	59.000	ENSUAMG00000015523	-	74	59.000	Ursus_americanus
ENSTRUG00000021596	gatc	51	60.000	ENSVVUG00000021055	-	74	60.000	Vulpes_vulpes
ENSTRUG00000021596	gatc	56	86.364	ENSXCOG00000017087	gatc	80	86.364	Xiphophorus_couchianus
ENSTRUG00000021596	gatc	83	68.862	ENSXMAG00000018267	gatc	74	79.562	Xiphophorus_maculatus