EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000021619 (Gene tree)
Gene ID: 101074373
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5203 bases
Position: chr20:3977309-3982511
Accession: 101074373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054387	MMR_HSR1	PF01926.23	2.7e-07	1	1
ENSTRUP00000054159	MMR_HSR1	PF01926.23	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000056778	-	3320	XM_003974018	ENSTRUP00000054387	216 (aa)	XP_003974067	UPI00002BB4A8
ENSTRUT00000052499	-	3219	XM_011614706	ENSTRUP00000054159	230 (aa)	XP_011613008	UPI0005D1942F

Gene Model

Click here to download ENSTRUG00000021619's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000021619	-	79	53.801	ENSTRUG00000003363	rab2a	83	55.414
ENSTRUG00000021619	-	73	39.264	ENSTRUG00000020093	-	78	39.264
ENSTRUG00000021619	-	100	97.685	ENSTRUG00000022029	rab11bb	99	97.685
ENSTRUG00000021619	-	100	95.370	ENSTRUG00000021614	-	99	95.370
ENSTRUG00000021619	-	75	47.826	ENSTRUG00000015590	rab5c	95	40.367
ENSTRUG00000021619	-	84	69.061	ENSTRUG00000007504	rab25b	87	69.061
ENSTRUG00000021619	-	53	30.159	ENSTRUG00000003085	arl4cb	63	30.159
ENSTRUG00000021619	-	77	52.096	ENSTRUG00000011399	-	78	52.096
ENSTRUG00000021619	-	73	35.669	ENSTRUG00000009223	rab41	77	36.196
ENSTRUG00000021619	-	100	61.574	ENSTRUG00000014595	-	99	61.574
ENSTRUG00000021619	-	69	36.000	ENSTRUG00000024825	hrasb	86	36.747
ENSTRUG00000021619	-	75	42.236	ENSTRUG00000018380	rab22a	85	41.818
ENSTRUG00000021619	-	73	35.669	ENSTRUG00000004881	rab6bb	78	36.196
ENSTRUG00000021619	-	99	81.308	ENSTRUG00000007556	rab11al	95	90.411
ENSTRUG00000021619	-	75	40.123	ENSTRUG00000014783	RAB15	76	40.123
ENSTRUG00000021619	-	75	31.214	ENSTRUG00000008651	rasl11a	67	31.214
ENSTRUG00000021619	-	100	86.574	ENSTRUG00000020792	rab11a	99	86.574
ENSTRUG00000021619	-	94	43.137	ENSTRUG00000024368	rab5aa	92	42.381
ENSTRUG00000021619	-	94	35.780	ENSTRUG00000007036	rab33ba	88	35.780
ENSTRUG00000021619	-	72	35.849	ENSTRUG00000010393	-	62	35.849
ENSTRUG00000021619	-	92	33.000	ENSTRUG00000023252	rab6a	94	33.495
ENSTRUG00000021619	-	77	43.373	ENSTRUG00000017824	rab15	78	43.373
ENSTRUG00000021619	-	54	38.655	ENSTRUG00000005937	rab34a	53	38.655
ENSTRUG00000021619	-	75	34.731	ENSTRUG00000023011	rerg	82	34.731
ENSTRUG00000021619	-	72	33.548	ENSTRUG00000013749	ran	71	33.548
ENSTRUG00000021619	-	60	30.345	ENSTRUG00000023169	arl8ba	70	30.345
ENSTRUG00000021619	-	96	44.762	ENSTRUG00000023164	rab1ab	98	44.762
ENSTRUG00000021619	-	75	46.914	ENSTRUG00000004984	rab18a	79	46.914
ENSTRUG00000021619	-	81	43.678	ENSTRUG00000025076	si:dkey-16l2.16	91	47.826
ENSTRUG00000021619	-	74	31.875	ENSTRUG00000004902	rheb	86	32.075
ENSTRUG00000021619	-	97	46.890	ENSTRUG00000024994	RAB1A	99	46.890
ENSTRUG00000021619	-	81	47.701	ENSTRUG00000024177	rab13	87	47.701
ENSTRUG00000021619	-	73	39.264	ENSTRUG00000010082	RAB7A	78	39.264
ENSTRUG00000021619	-	70	34.839	ENSTRUG00000023449	kras	89	35.673
ENSTRUG00000021619	-	67	33.333	ENSTRUG00000015697	rab23	79	33.129
ENSTRUG00000021619	-	96	36.364	ENSTRUG00000024455	rab12	84	36.842
ENSTRUG00000021619	-	82	38.122	ENSTRUG00000013963	RAB9A	87	38.122
ENSTRUG00000021619	-	50	30.000	ENSTRUG00000003183	-	60	30.000
ENSTRUG00000021619	-	75	39.286	ENSTRUG00000008698	rab9a	83	39.286
ENSTRUG00000021619	-	82	39.665	ENSTRUG00000009903	zgc:101559	76	39.665
ENSTRUG00000021619	-	97	38.571	ENSTRUG00000022559	rab30	97	38.571
ENSTRUG00000021619	-	76	46.988	ENSTRUG00000025018	rab39bb	78	48.810
ENSTRUG00000021619	-	75	32.317	ENSTRUG00000005805	mras	82	34.091
ENSTRUG00000021619	-	84	41.530	ENSTRUG00000010224	rab42a	84	41.530
ENSTRUG00000021619	-	83	36.957	ENSTRUG00000020335	rab33a	74	37.306
ENSTRUG00000021619	-	75	45.122	ENSTRUG00000004283	rab18b	80	45.122
ENSTRUG00000021619	-	97	45.933	ENSTRUG00000004287	rab1ba	99	45.933
ENSTRUG00000021619	-	78	35.714	ENSTRUG00000012454	rabl2	72	35.928
ENSTRUG00000021619	-	75	30.675	ENSTRUG00000020012	rhebl1	88	30.864
ENSTRUG00000021619	-	77	48.795	ENSTRUG00000020633	rab35b	94	44.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021619	-	100	97.685	ENSAPOG00000023455	rab11bb	99	97.685	Acanthochromis_polyacanthus
ENSTRUG00000021619	-	100	99.537	ENSACIG00000024376	-	99	99.537	Amphilophus_citrinellus
ENSTRUG00000021619	-	100	85.648	ENSACIG00000019631	rab11bb	99	85.648	Amphilophus_citrinellus
ENSTRUG00000021619	-	100	99.537	ENSAOCG00000018849	-	99	99.537	Amphiprion_ocellaris
ENSTRUG00000021619	-	100	97.685	ENSAOCG00000018239	rab11bb	99	97.685	Amphiprion_ocellaris
ENSTRUG00000021619	-	100	97.685	ENSAPEG00000016590	rab11bb	99	97.685	Amphiprion_percula
ENSTRUG00000021619	-	100	97.685	ENSATEG00000017696	rab11bb	99	97.685	Anabas_testudineus
ENSTRUG00000021619	-	100	99.074	ENSATEG00000023725	-	99	99.074	Anabas_testudineus
ENSTRUG00000021619	-	94	98.529	ENSAPLG00000011046	-	94	98.529	Anas_platyrhynchos
ENSTRUG00000021619	-	100	97.685	ENSACLG00000007076	rab11bb	99	97.685	Astatotilapia_calliptera
ENSTRUG00000021619	-	100	99.537	ENSACLG00000005446	-	99	99.537	Astatotilapia_calliptera
ENSTRUG00000021619	-	100	96.759	ENSAMXG00000037623	-	99	96.759	Astyanax_mexicanus
ENSTRUG00000021619	-	100	99.074	ENSAMXG00000042655	rab11bb	99	99.074	Astyanax_mexicanus
ENSTRUG00000021619	-	100	96.759	ENSBTAG00000002475	RAB11B	99	96.759	Bos_taurus
ENSTRUG00000021619	-	96	95.169	ENSCHIG00000022426	-	96	93.519	Capra_hircus
ENSTRUG00000021619	-	100	96.759	ENSCATG00000029188	-	99	96.759	Cercocebus_atys
ENSTRUG00000021619	-	100	97.685	ENSCPBG00000017056	-	99	97.685	Chrysemys_picta_bellii
ENSTRUG00000021619	-	100	99.074	ENSCSEG00000007239	-	99	99.074	Cynoglossus_semilaevis
ENSTRUG00000021619	-	100	97.685	ENSCSEG00000012149	rab11bb	99	97.685	Cynoglossus_semilaevis
ENSTRUG00000021619	-	100	95.370	ENSCVAG00000019751	-	99	95.370	Cyprinodon_variegatus
ENSTRUG00000021619	-	100	97.685	ENSCVAG00000017021	-	99	97.685	Cyprinodon_variegatus
ENSTRUG00000021619	-	100	98.611	ENSCVAG00000019718	-	99	98.611	Cyprinodon_variegatus
ENSTRUG00000021619	-	100	97.685	ENSDARG00000090086	rab11bb	99	97.685	Danio_rerio
ENSTRUG00000021619	-	99	94.419	ENSETEG00000000905	-	99	94.419	Echinops_telfairi
ENSTRUG00000021619	-	99	94.366	ENSEASG00005003708	-	98	94.366	Equus_asinus_asinus
ENSTRUG00000021619	-	99	94.366	ENSECAG00000000716	RAB11B	98	94.366	Equus_caballus
ENSTRUG00000021619	-	100	97.222	ENSELUG00000000916	-	99	97.222	Esox_lucius
ENSTRUG00000021619	-	100	97.685	ENSELUG00000021148	rab11bb	99	97.685	Esox_lucius
ENSTRUG00000021619	-	100	98.148	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSTRUG00000021619	-	100	97.685	ENSFALG00000011828	-	99	97.685	Ficedula_albicollis
ENSTRUG00000021619	-	100	99.074	ENSFHEG00000022676	-	99	99.074	Fundulus_heteroclitus
ENSTRUG00000021619	-	100	97.685	ENSFHEG00000018353	rab11bb	99	97.685	Fundulus_heteroclitus
ENSTRUG00000021619	-	100	97.685	ENSGMOG00000009211	rab11bb	99	97.685	Gadus_morhua
ENSTRUG00000021619	-	100	94.907	ENSGMOG00000009668	-	99	94.907	Gadus_morhua
ENSTRUG00000021619	-	100	97.685	ENSGALG00000000613	RAB11B	99	97.685	Gallus_gallus
ENSTRUG00000021619	-	100	97.685	ENSGAFG00000007102	rab11bb	99	97.685	Gambusia_affinis
ENSTRUG00000021619	-	100	94.907	ENSGACG00000013297	-	98	94.907	Gasterosteus_aculeatus
ENSTRUG00000021619	-	100	97.222	ENSGACG00000015479	rab11bb	99	97.222	Gasterosteus_aculeatus
ENSTRUG00000021619	-	100	96.759	ENSGGOG00000014516	RAB11B	99	96.759	Gorilla_gorilla
ENSTRUG00000021619	-	100	99.537	ENSHBUG00000009947	-	99	99.537	Haplochromis_burtoni
ENSTRUG00000021619	-	100	97.685	ENSHBUG00000014777	rab11bb	99	97.685	Haplochromis_burtoni
ENSTRUG00000021619	-	100	98.148	ENSHCOG00000002423	rab11bb	99	98.148	Hippocampus_comes
ENSTRUG00000021619	-	100	93.519	ENSHCOG00000000985	-	99	93.519	Hippocampus_comes
ENSTRUG00000021619	-	100	96.296	ENSHCOG00000000954	-	99	96.296	Hippocampus_comes
ENSTRUG00000021619	-	100	98.611	ENSIPUG00000019927	rab11bb	99	98.611	Ictalurus_punctatus
ENSTRUG00000021619	-	100	96.759	ENSIPUG00000025100	rab11b	99	96.759	Ictalurus_punctatus
ENSTRUG00000021619	-	100	99.537	ENSKMAG00000006170	-	99	99.537	Kryptolebias_marmoratus
ENSTRUG00000021619	-	100	97.685	ENSKMAG00000009033	rab11bb	99	97.685	Kryptolebias_marmoratus
ENSTRUG00000021619	-	100	97.685	ENSLBEG00000015248	rab11bb	99	97.685	Labrus_bergylta
ENSTRUG00000021619	-	100	98.611	ENSLBEG00000004172	-	99	98.611	Labrus_bergylta
ENSTRUG00000021619	-	100	91.204	ENSLBEG00000005981	-	99	91.204	Labrus_bergylta
ENSTRUG00000021619	-	100	97.685	ENSLACG00000016857	-	99	97.685	Latimeria_chalumnae
ENSTRUG00000021619	-	100	96.759	ENSMFAG00000003654	RAB11B	99	96.759	Macaca_fascicularis
ENSTRUG00000021619	-	100	96.759	ENSMLEG00000030601	-	99	96.759	Mandrillus_leucophaeus
ENSTRUG00000021619	-	100	97.222	ENSMAMG00000006378	rab11bb	99	97.222	Mastacembelus_armatus
ENSTRUG00000021619	-	100	98.148	ENSMAMG00000018533	-	99	98.148	Mastacembelus_armatus
ENSTRUG00000021619	-	100	97.685	ENSMZEG00005003352	rab11bb	99	97.685	Maylandia_zebra
ENSTRUG00000021619	-	100	99.537	ENSMZEG00005010975	-	99	99.537	Maylandia_zebra
ENSTRUG00000021619	-	100	96.759	ENSMICG00000034065	-	99	96.759	Microcebus_murinus
ENSTRUG00000021619	-	94	97.537	ENSMMOG00000007917	rab11bb	99	97.537	Mola_mola
ENSTRUG00000021619	-	100	99.537	ENSMMOG00000001250	-	99	99.537	Mola_mola
ENSTRUG00000021619	-	100	95.833	ENSMMOG00000001238	-	99	95.833	Mola_mola
ENSTRUG00000021619	-	100	97.685	ENSMODG00000003841	-	99	97.685	Monodelphis_domestica
ENSTRUG00000021619	-	100	97.685	ENSMALG00000022187	rab11bb	99	97.685	Monopterus_albus
ENSTRUG00000021619	-	94	88.780	ENSMLUG00000006677	-	99	88.780	Myotis_lucifugus
ENSTRUG00000021619	-	100	99.537	ENSNBRG00000023885	-	99	99.537	Neolamprologus_brichardi
ENSTRUG00000021619	-	100	97.685	ENSNBRG00000000372	rab11bb	99	97.685	Neolamprologus_brichardi
ENSTRUG00000021619	-	100	97.685	ENSMEUG00000003686	-	99	97.685	Notamacropus_eugenii
ENSTRUG00000021619	-	100	99.537	ENSONIG00000002544	-	99	99.537	Oreochromis_niloticus
ENSTRUG00000021619	-	100	97.685	ENSONIG00000010435	rab11bb	99	97.685	Oreochromis_niloticus
ENSTRUG00000021619	-	53	94.737	ENSOANG00000031567	-	83	94.783	Ornithorhynchus_anatinus
ENSTRUG00000021619	-	100	97.685	ENSORLG00000015284	-	72	97.685	Oryzias_latipes
ENSTRUG00000021619	-	100	97.222	ENSORLG00000013938	rab11bb	99	97.222	Oryzias_latipes
ENSTRUG00000021619	-	100	97.222	ENSORLG00020019393	rab11bb	99	97.222	Oryzias_latipes_hni
ENSTRUG00000021619	-	100	97.685	ENSORLG00020020844	RAB11B	99	97.685	Oryzias_latipes_hni
ENSTRUG00000021619	-	100	97.685	ENSORLG00015016999	RAB11B	99	97.685	Oryzias_latipes_hsok
ENSTRUG00000021619	-	100	97.222	ENSORLG00015020173	rab11bb	99	97.222	Oryzias_latipes_hsok
ENSTRUG00000021619	-	100	97.685	ENSOMEG00000017806	-	99	97.685	Oryzias_melastigma
ENSTRUG00000021619	-	100	98.611	ENSOMEG00000002562	-	99	98.611	Oryzias_melastigma
ENSTRUG00000021619	-	100	96.759	ENSPPAG00000028589	-	99	96.759	Pan_paniscus
ENSTRUG00000021619	-	100	96.759	ENSPTRG00000010422	RAB11B	99	96.759	Pan_troglodytes
ENSTRUG00000021619	-	100	96.759	ENSPANG00000007765	-	99	96.759	Papio_anubis
ENSTRUG00000021619	-	99	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSTRUG00000021619	-	99	98.140	ENSPKIG00000011640	rab11bb	99	98.140	Paramormyrops_kingsleyae
ENSTRUG00000021619	-	100	97.222	ENSPKIG00000011703	-	99	97.222	Paramormyrops_kingsleyae
ENSTRUG00000021619	-	98	93.548	ENSPSIG00000010242	-	84	93.548	Pelodiscus_sinensis
ENSTRUG00000021619	-	100	93.981	ENSPMGG00000014336	-	99	93.981	Periophthalmus_magnuspinnatus
ENSTRUG00000021619	-	100	97.685	ENSPMGG00000014333	-	99	97.685	Periophthalmus_magnuspinnatus
ENSTRUG00000021619	-	100	97.685	ENSPMGG00000009435	rab11bb	99	97.685	Periophthalmus_magnuspinnatus
ENSTRUG00000021619	-	97	96.667	ENSPCIG00000020371	-	98	96.667	Phascolarctos_cinereus
ENSTRUG00000021619	-	100	99.537	ENSPFOG00000006224	-	99	99.537	Poecilia_formosa
ENSTRUG00000021619	-	100	97.685	ENSPFOG00000024114	-	99	97.685	Poecilia_formosa
ENSTRUG00000021619	-	100	99.537	ENSPLAG00000014207	-	99	99.537	Poecilia_latipinna
ENSTRUG00000021619	-	100	97.685	ENSPLAG00000001598	rab11bb	99	97.685	Poecilia_latipinna
ENSTRUG00000021619	-	100	97.685	ENSPMEG00000012389	rab11bb	99	97.685	Poecilia_mexicana
ENSTRUG00000021619	-	100	99.537	ENSPMEG00000007842	-	99	99.537	Poecilia_mexicana
ENSTRUG00000021619	-	100	97.685	ENSPREG00000014269	rab11bb	99	97.685	Poecilia_reticulata
ENSTRUG00000021619	-	100	99.074	ENSPREG00000006336	-	99	99.074	Poecilia_reticulata
ENSTRUG00000021619	-	100	99.537	ENSPNYG00000019611	-	99	99.537	Pundamilia_nyererei
ENSTRUG00000021619	-	100	97.685	ENSPNYG00000004098	rab11bb	99	97.685	Pundamilia_nyererei
ENSTRUG00000021619	-	100	96.759	ENSRROG00000037812	-	99	96.759	Rhinopithecus_roxellana
ENSTRUG00000021619	-	97	96.667	ENSSHAG00000006816	-	96	96.667	Sarcophilus_harrisii
ENSTRUG00000021619	-	100	97.222	ENSSFOG00015009042	rab11bb	99	97.222	Scleropages_formosus
ENSTRUG00000021619	-	100	74.537	ENSSFOG00015006245	-	99	74.537	Scleropages_formosus
ENSTRUG00000021619	-	100	95.833	ENSSMAG00000018613	-	99	95.833	Scophthalmus_maximus
ENSTRUG00000021619	-	100	97.222	ENSSMAG00000004922	rab11bb	99	97.222	Scophthalmus_maximus
ENSTRUG00000021619	-	100	99.537	ENSSDUG00000002934	-	99	99.537	Seriola_dumerili
ENSTRUG00000021619	-	100	97.685	ENSSDUG00000013558	rab11bb	99	97.685	Seriola_dumerili
ENSTRUG00000021619	-	100	97.685	ENSSLDG00000020676	rab11bb	99	97.685	Seriola_lalandi_dorsalis
ENSTRUG00000021619	-	100	99.537	ENSSLDG00000005275	-	99	99.537	Seriola_lalandi_dorsalis
ENSTRUG00000021619	-	100	97.685	ENSSPUG00000002243	-	99	97.685	Sphenodon_punctatus
ENSTRUG00000021619	-	100	97.685	ENSSPAG00000011419	rab11bb	99	97.685	Stegastes_partitus
ENSTRUG00000021619	-	100	99.537	ENSSPAG00000014559	-	99	99.537	Stegastes_partitus
ENSTRUG00000021619	-	100	97.685	ENSTGUG00000000084	-	99	97.685	Taeniopygia_guttata
ENSTRUG00000021619	-	94	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSTRUG00000021619	-	100	100.000	ENSTNIG00000013182	-	100	100.000	Tetraodon_nigroviridis
ENSTRUG00000021619	-	100	94.907	ENSTNIG00000013184	-	99	94.907	Tetraodon_nigroviridis
ENSTRUG00000021619	-	100	96.759	ENSTNIG00000011081	rab11bb	99	96.759	Tetraodon_nigroviridis
ENSTRUG00000021619	-	94	97.537	ENSUAMG00000006639	-	99	97.537	Ursus_americanus
ENSTRUG00000021619	-	100	96.774	ENSXETG00000025484	rab11b.1	98	96.774	Xenopus_tropicalis
ENSTRUG00000021619	-	100	99.537	ENSXCOG00000009190	-	99	99.537	Xiphophorus_couchianus
ENSTRUG00000021619	-	100	97.685	ENSXCOG00000008042	-	99	97.685	Xiphophorus_couchianus
ENSTRUG00000021619	-	100	99.074	ENSXMAG00000024840	-	99	99.074	Xiphophorus_maculatus
ENSTRUG00000021619	-	100	97.685	ENSXMAG00000011926	rab11bb	99	97.685	Xiphophorus_maculatus