EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000021675 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3714 bases
Position: chr7:14265648-14269361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	1	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	2	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	3	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	4	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	5	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	6	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	7	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	8	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	9	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	10	11
ENSTRUP00000048314	zf-C2H2	PF00096.26	3.9e-61	11	11
ENSTRUP00000048314	zf-met	PF12874.7	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000058242	-	3380	-	ENSTRUP00000048314	583 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000021675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000021675	-	88	44.841	ENSTRUG00000019483	-	95	43.200
ENSTRUG00000021675	-	83	36.607	ENSTRUG00000025597	znf646	93	36.607
ENSTRUG00000021675	-	78	40.000	ENSTRUG00000001452	PRDM15	55	40.000
ENSTRUG00000021675	-	64	36.630	ENSTRUG00000020208	-	64	36.630
ENSTRUG00000021675	-	54	42.342	ENSTRUG00000022391	-	50	42.342
ENSTRUG00000021675	-	82	45.415	ENSTRUG00000020582	-	90	45.415
ENSTRUG00000021675	-	64	38.636	ENSTRUG00000012719	-	53	38.636
ENSTRUG00000021675	-	72	39.157	ENSTRUG00000004525	gfi1b	55	39.759
ENSTRUG00000021675	-	64	38.636	ENSTRUG00000019558	-	56	38.636
ENSTRUG00000021675	-	70	41.241	ENSTRUG00000003277	zbtb17	96	45.161
ENSTRUG00000021675	-	93	46.479	ENSTRUG00000001268	-	97	42.991
ENSTRUG00000021675	-	87	41.155	ENSTRUG00000022076	-	81	41.569
ENSTRUG00000021675	-	79	41.007	ENSTRUG00000021765	-	62	41.007
ENSTRUG00000021675	-	70	43.925	ENSTRUG00000025588	snai2	52	43.925
ENSTRUG00000021675	-	64	36.170	ENSTRUG00000015366	patz1	51	33.721
ENSTRUG00000021675	-	79	40.223	ENSTRUG00000013906	-	91	40.223
ENSTRUG00000021675	-	69	38.926	ENSTRUG00000024073	-	63	38.926
ENSTRUG00000021675	-	83	37.222	ENSTRUG00000025881	-	66	37.222
ENSTRUG00000021675	-	66	39.394	ENSTRUG00000011637	scrt1b	60	39.394
ENSTRUG00000021675	-	79	34.524	ENSTRUG00000019685	znf319b	61	36.429
ENSTRUG00000021675	-	64	37.121	ENSTRUG00000007620	scrt2	52	37.121
ENSTRUG00000021675	-	80	33.533	ENSTRUG00000024008	-	54	33.171
ENSTRUG00000021675	-	78	35.735	ENSTRUG00000003454	-	70	35.735
ENSTRUG00000021675	-	81	32.039	ENSTRUG00000013850	prdm5	73	32.039
ENSTRUG00000021675	-	93	32.258	ENSTRUG00000014476	-	87	30.790
ENSTRUG00000021675	-	78	43.443	ENSTRUG00000007022	-	65	41.810
ENSTRUG00000021675	-	86	42.991	ENSTRUG00000017456	znf236	72	35.052
ENSTRUG00000021675	-	79	31.158	ENSTRUG00000022843	-	69	31.158
ENSTRUG00000021675	-	78	44.444	ENSTRUG00000022066	-	91	39.227
ENSTRUG00000021675	-	78	38.376	ENSTRUG00000022666	-	50	38.376
ENSTRUG00000021675	-	51	47.619	ENSTRUG00000022969	-	66	47.619
ENSTRUG00000021675	-	51	43.836	ENSTRUG00000000419	sna2	56	43.836
ENSTRUG00000021675	-	69	37.705	ENSTRUG00000005880	-	53	37.705
ENSTRUG00000021675	-	80	35.052	ENSTRUG00000012157	-	91	35.052
ENSTRUG00000021675	-	69	44.845	ENSTRUG00000005180	-	84	44.845
ENSTRUG00000021675	-	78	46.193	ENSTRUG00000023925	-	59	46.193
ENSTRUG00000021675	-	78	43.119	ENSTRUG00000022919	-	77	43.119
ENSTRUG00000021675	-	90	41.438	ENSTRUG00000000995	-	69	41.438
ENSTRUG00000021675	-	81	45.714	ENSTRUG00000005321	-	95	45.714
ENSTRUG00000021675	-	80	45.614	ENSTRUG00000023491	-	64	46.386
ENSTRUG00000021675	-	54	49.383	ENSTRUG00000023354	-	51	49.383
ENSTRUG00000021675	-	80	44.444	ENSTRUG00000003111	-	83	43.478
ENSTRUG00000021675	-	80	41.418	ENSTRUG00000022206	-	57	41.758
ENSTRUG00000021675	-	69	45.133	ENSTRUG00000025189	-	77	51.899
ENSTRUG00000021675	-	93	41.379	ENSTRUG00000012273	-	75	44.590
ENSTRUG00000021675	-	96	39.799	ENSTRUG00000006896	-	93	39.799
ENSTRUG00000021675	-	89	41.577	ENSTRUG00000015687	-	95	42.761
ENSTRUG00000021675	-	79	44.840	ENSTRUG00000019940	-	50	44.840
ENSTRUG00000021675	-	81	34.532	ENSTRUG00000019941	-	54	34.532
ENSTRUG00000021675	-	50	33.113	ENSTRUG00000005241	gtf3ab	83	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021675	-	78	39.404	ENSAPOG00000013511	-	53	39.404	Acanthochromis_polyacanthus
ENSTRUG00000021675	-	88	37.135	ENSAPOG00000004328	-	89	37.654	Acanthochromis_polyacanthus
ENSTRUG00000021675	-	80	37.829	ENSACIG00000010739	-	81	37.829	Amphilophus_citrinellus
ENSTRUG00000021675	-	88	37.394	ENSAOCG00000007045	-	90	37.891	Amphiprion_ocellaris
ENSTRUG00000021675	-	79	39.662	ENSAPEG00000016483	-	59	39.662	Amphiprion_percula
ENSTRUG00000021675	-	88	37.500	ENSAPEG00000001596	-	78	39.427	Amphiprion_percula
ENSTRUG00000021675	-	81	39.667	ENSATEG00000006085	-	86	39.667	Anabas_testudineus
ENSTRUG00000021675	-	79	48.980	ENSACAG00000025537	-	100	48.980	Anolis_carolinensis
ENSTRUG00000021675	-	84	47.120	ENSACAG00000000082	-	94	47.120	Anolis_carolinensis
ENSTRUG00000021675	-	78	47.154	ENSAMXG00000036257	-	97	44.656	Astyanax_mexicanus
ENSTRUG00000021675	-	71	48.347	ENSAMXG00000035949	-	76	48.347	Astyanax_mexicanus
ENSTRUG00000021675	-	77	44.928	ENSAMXG00000032237	-	95	43.119	Astyanax_mexicanus
ENSTRUG00000021675	-	71	49.057	ENSAMXG00000035145	-	64	49.038	Astyanax_mexicanus
ENSTRUG00000021675	-	78	45.652	ENSAMXG00000026143	-	97	44.599	Astyanax_mexicanus
ENSTRUG00000021675	-	77	46.484	ENSAMXG00000012873	-	95	46.484	Astyanax_mexicanus
ENSTRUG00000021675	-	69	50.230	ENSAMXG00000033013	-	84	50.230	Astyanax_mexicanus
ENSTRUG00000021675	-	81	36.786	ENSCVAG00000011235	-	89	37.000	Cyprinodon_variegatus
ENSTRUG00000021675	-	79	39.737	ENSELUG00000021287	-	79	39.737	Esox_lucius
ENSTRUG00000021675	-	77	48.734	ENSELUG00000013844	-	76	37.456	Esox_lucius
ENSTRUG00000021675	-	79	37.179	ENSELUG00000013357	-	84	42.955	Esox_lucius
ENSTRUG00000021675	-	78	40.625	ENSFHEG00000019915	-	74	37.751	Fundulus_heteroclitus
ENSTRUG00000021675	-	77	39.600	ENSGMOG00000003238	-	100	38.323	Gadus_morhua
ENSTRUG00000021675	-	69	38.554	ENSGAFG00000003150	-	87	54.054	Gambusia_affinis
ENSTRUG00000021675	-	92	36.778	ENSGAFG00000012977	-	91	36.778	Gambusia_affinis
ENSTRUG00000021675	-	78	40.496	ENSIPUG00000006916	-	87	40.547	Ictalurus_punctatus
ENSTRUG00000021675	-	76	43.810	ENSIPUG00000004428	-	76	43.810	Ictalurus_punctatus
ENSTRUG00000021675	-	79	50.000	ENSIPUG00000021556	-	84	50.000	Ictalurus_punctatus
ENSTRUG00000021675	-	80	37.538	ENSKMAG00000004988	-	89	37.543	Kryptolebias_marmoratus
ENSTRUG00000021675	-	70	43.111	ENSLOCG00000014366	-	96	41.935	Lepisosteus_oculatus
ENSTRUG00000021675	-	77	43.542	ENSLOCG00000014144	-	100	43.542	Lepisosteus_oculatus
ENSTRUG00000021675	-	77	34.901	ENSMAMG00000016542	-	59	34.901	Mastacembelus_armatus
ENSTRUG00000021675	-	82	42.857	ENSMAMG00000019301	-	97	44.828	Mastacembelus_armatus
ENSTRUG00000021675	-	78	45.000	ENSMMOG00000009852	-	86	45.000	Mola_mola
ENSTRUG00000021675	-	77	40.889	ENSMALG00000005554	-	91	41.270	Monopterus_albus
ENSTRUG00000021675	-	77	46.875	ENSOCUG00000005876	-	100	46.154	Oryctolagus_cuniculus
ENSTRUG00000021675	-	77	39.357	ENSPKIG00000006616	-	57	39.357	Paramormyrops_kingsleyae
ENSTRUG00000021675	-	77	36.080	ENSPMGG00000017633	-	89	36.080	Periophthalmus_magnuspinnatus
ENSTRUG00000021675	-	92	40.206	ENSPFOG00000010682	-	91	40.206	Poecilia_formosa
ENSTRUG00000021675	-	79	38.988	ENSPLAG00000002892	-	70	41.414	Poecilia_latipinna
ENSTRUG00000021675	-	92	40.206	ENSPMEG00000001399	-	91	40.206	Poecilia_mexicana
ENSTRUG00000021675	-	93	34.921	ENSPREG00000001386	-	91	38.870	Poecilia_reticulata
ENSTRUG00000021675	-	82	39.698	ENSPREG00000002582	-	61	39.698	Poecilia_reticulata
ENSTRUG00000021675	-	68	48.101	ENSPNAG00000015116	-	65	48.101	Pygocentrus_nattereri
ENSTRUG00000021675	-	78	39.344	ENSPNAG00000025570	-	83	39.344	Pygocentrus_nattereri
ENSTRUG00000021675	-	77	42.679	ENSPNAG00000000219	-	89	42.679	Pygocentrus_nattereri
ENSTRUG00000021675	-	69	36.790	ENSSFOG00015006108	-	56	36.790	Scleropages_formosus
ENSTRUG00000021675	-	86	49.306	ENSSMAG00000009115	-	84	50.725	Scophthalmus_maximus
ENSTRUG00000021675	-	81	40.584	ENSSDUG00000002195	-	90	40.584	Seriola_dumerili
ENSTRUG00000021675	-	87	38.929	ENSSDUG00000006463	-	90	38.929	Seriola_dumerili
ENSTRUG00000021675	-	83	41.667	ENSSLDG00000020727	-	99	45.312	Seriola_lalandi_dorsalis
ENSTRUG00000021675	-	87	39.085	ENSSLDG00000006724	-	93	45.038	Seriola_lalandi_dorsalis
ENSTRUG00000021675	-	72	38.194	ENSSPAG00000012960	-	83	38.194	Stegastes_partitus
ENSTRUG00000021675	-	77	45.333	ENSSPAG00000021008	-	90	45.852	Stegastes_partitus
ENSTRUG00000021675	-	77	45.802	ENSTNIG00000000320	-	100	44.928	Tetraodon_nigroviridis
ENSTRUG00000021675	-	77	85.027	ENSTNIG00000008200	-	100	85.027	Tetraodon_nigroviridis
ENSTRUG00000021675	-	80	49.180	ENSXETG00000006575	znf420	77	49.180	Xenopus_tropicalis
ENSTRUG00000021675	-	77	41.549	ENSXCOG00000009665	-	95	41.549	Xiphophorus_couchianus
ENSTRUG00000021675	-	92	40.893	ENSXMAG00000028625	-	91	40.893	Xiphophorus_maculatus