EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000021845 (Gene tree)
Gene ID: 101075025
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5065 bases
Position: chr14:1969381-1974445
Accession: 101075025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052305	RNase_H2_suC	PF08615.11	1.2e-20	1	1
ENSTRUP00000052666	RNase_H2_suC	PF08615.11	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051838	-	4649	-	ENSTRUP00000052666	140 (aa)	-	-
ENSTRUT00000049068	-	4461	XM_003970207	ENSTRUP00000052305	136 (aa)	XP_003970256	UPI000298E897

Gene Model

Click here to download ENSTRUG00000021845's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000021845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000021845	rnaseh2c	100	79.412	ENSAPOG00000012901	rnaseh2c	99	79.412	Acanthochromis_polyacanthus
ENSTRUG00000021845	rnaseh2c	100	75.000	ENSACIG00000022433	rnaseh2c	100	75.000	Amphilophus_citrinellus
ENSTRUG00000021845	rnaseh2c	100	79.412	ENSAOCG00000016855	rnaseh2c	100	79.412	Amphiprion_ocellaris
ENSTRUG00000021845	rnaseh2c	100	80.147	ENSAPEG00000009850	rnaseh2c	100	80.147	Amphiprion_percula
ENSTRUG00000021845	rnaseh2c	100	78.676	ENSATEG00000014395	rnaseh2c	100	78.676	Anabas_testudineus
ENSTRUG00000021845	rnaseh2c	100	74.265	ENSACLG00000016950	rnaseh2c	100	74.265	Astatotilapia_calliptera
ENSTRUG00000021845	rnaseh2c	99	59.259	ENSAMXG00000001210	rnaseh2c	100	59.259	Astyanax_mexicanus
ENSTRUG00000021845	rnaseh2c	99	47.015	ENSCPBG00000023408	-	96	47.015	Chrysemys_picta_bellii
ENSTRUG00000021845	rnaseh2c	100	72.794	ENSCSEG00000005808	rnaseh2c	99	72.794	Cynoglossus_semilaevis
ENSTRUG00000021845	rnaseh2c	100	69.853	ENSCVAG00000006337	rnaseh2c	100	69.853	Cyprinodon_variegatus
ENSTRUG00000021845	rnaseh2c	100	62.500	ENSDARG00000089637	rnaseh2c	99	62.500	Danio_rerio
ENSTRUG00000021845	rnaseh2c	90	41.860	ENSEBUG00000014939	rnaseh2c	83	41.221	Eptatretus_burgeri
ENSTRUG00000021845	rnaseh2c	99	63.704	ENSELUG00000007345	rnaseh2c	99	63.704	Esox_lucius
ENSTRUG00000021845	rnaseh2c	96	70.000	ENSFHEG00000002419	rnaseh2c	96	70.992	Fundulus_heteroclitus
ENSTRUG00000021845	rnaseh2c	65	74.157	ENSGMOG00000008727	rnaseh2c	99	74.157	Gadus_morhua
ENSTRUG00000021845	rnaseh2c	100	70.588	ENSGAFG00000016755	rnaseh2c	83	70.588	Gambusia_affinis
ENSTRUG00000021845	rnaseh2c	99	47.015	ENSGAGG00000008193	-	96	47.015	Gopherus_agassizii
ENSTRUG00000021845	rnaseh2c	100	75.000	ENSHBUG00000012806	rnaseh2c	100	75.000	Haplochromis_burtoni
ENSTRUG00000021845	rnaseh2c	100	70.588	ENSHCOG00000007177	rnaseh2c	100	70.588	Hippocampus_comes
ENSTRUG00000021845	rnaseh2c	100	58.824	ENSIPUG00000018044	rnaseh2c	100	58.824	Ictalurus_punctatus
ENSTRUG00000021845	rnaseh2c	100	72.794	ENSKMAG00000004184	rnaseh2c	100	72.794	Kryptolebias_marmoratus
ENSTRUG00000021845	rnaseh2c	100	75.912	ENSLBEG00000005742	rnaseh2c	100	75.912	Labrus_bergylta
ENSTRUG00000021845	rnaseh2c	95	54.264	ENSLACG00000010120	-	93	53.030	Latimeria_chalumnae
ENSTRUG00000021845	rnaseh2c	100	76.471	ENSMAMG00000021610	rnaseh2c	100	76.471	Mastacembelus_armatus
ENSTRUG00000021845	rnaseh2c	100	74.265	ENSMZEG00005004796	rnaseh2c	100	74.265	Maylandia_zebra
ENSTRUG00000021845	rnaseh2c	100	78.676	ENSMMOG00000002869	rnaseh2c	100	78.676	Mola_mola
ENSTRUG00000021845	rnaseh2c	100	80.292	ENSMALG00000012198	rnaseh2c	100	80.292	Monopterus_albus
ENSTRUG00000021845	rnaseh2c	100	75.000	ENSNBRG00000001462	rnaseh2c	100	75.000	Neolamprologus_brichardi
ENSTRUG00000021845	rnaseh2c	100	74.265	ENSONIG00000005338	rnaseh2c	99	74.265	Oreochromis_niloticus
ENSTRUG00000021845	rnaseh2c	100	69.853	ENSORLG00000023473	rnaseh2c	100	69.853	Oryzias_latipes
ENSTRUG00000021845	rnaseh2c	100	70.588	ENSORLG00020019053	rnaseh2c	91	70.588	Oryzias_latipes_hni
ENSTRUG00000021845	rnaseh2c	100	71.324	ENSORLG00015017067	rnaseh2c	91	71.324	Oryzias_latipes_hsok
ENSTRUG00000021845	rnaseh2c	100	69.853	ENSOMEG00000018607	rnaseh2c	100	69.853	Oryzias_melastigma
ENSTRUG00000021845	rnaseh2c	100	56.618	ENSPKIG00000019331	rnaseh2c	100	56.618	Paramormyrops_kingsleyae
ENSTRUG00000021845	rnaseh2c	100	68.382	ENSPFOG00000009415	rnaseh2c	100	68.382	Poecilia_formosa
ENSTRUG00000021845	rnaseh2c	100	69.118	ENSPLAG00000023330	rnaseh2c	100	69.118	Poecilia_latipinna
ENSTRUG00000021845	rnaseh2c	100	69.118	ENSPMEG00000003696	rnaseh2c	100	69.118	Poecilia_mexicana
ENSTRUG00000021845	rnaseh2c	100	64.626	ENSPREG00000015384	rnaseh2c	73	64.626	Poecilia_reticulata
ENSTRUG00000021845	rnaseh2c	100	75.000	ENSPNYG00000014766	rnaseh2c	100	75.000	Pundamilia_nyererei
ENSTRUG00000021845	rnaseh2c	99	59.259	ENSPNAG00000019111	rnaseh2c	99	59.259	Pygocentrus_nattereri
ENSTRUG00000021845	rnaseh2c	99	63.704	ENSSFOG00015005760	rnaseh2c	100	63.910	Scleropages_formosus
ENSTRUG00000021845	rnaseh2c	100	77.206	ENSSMAG00000017738	rnaseh2c	100	77.206	Scophthalmus_maximus
ENSTRUG00000021845	rnaseh2c	100	80.882	ENSSDUG00000017285	rnaseh2c	100	80.882	Seriola_dumerili
ENSTRUG00000021845	rnaseh2c	100	81.618	ENSSLDG00000016030	rnaseh2c	100	81.618	Seriola_lalandi_dorsalis
ENSTRUG00000021845	rnaseh2c	96	46.617	ENSSPUG00000000842	-	89	45.588	Sphenodon_punctatus
ENSTRUG00000021845	rnaseh2c	100	76.471	ENSSPAG00000007536	rnaseh2c	100	76.471	Stegastes_partitus
ENSTRUG00000021845	rnaseh2c	100	88.235	ENSTNIG00000000431	rnaseh2c	100	88.235	Tetraodon_nigroviridis
ENSTRUG00000021845	rnaseh2c	99	47.015	ENSXETG00000032466	-	98	47.015	Xenopus_tropicalis
ENSTRUG00000021845	rnaseh2c	96	73.282	ENSXCOG00000001611	rnaseh2c	97	73.282	Xiphophorus_couchianus
ENSTRUG00000021845	rnaseh2c	100	72.794	ENSXMAG00000003147	rnaseh2c	83	72.794	Xiphophorus_maculatus