EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022194 (Gene tree)
Gene ID: 105416463
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 570-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4538 bases
Position: chr5:8368005-8372542
Accession: 105416463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052900	zf-C2H2	PF00096.26	4.5e-19	1	4
ENSTRUP00000052900	zf-C2H2	PF00096.26	4.5e-19	2	4
ENSTRUP00000052900	zf-C2H2	PF00096.26	4.5e-19	3	4
ENSTRUP00000052900	zf-C2H2	PF00096.26	4.5e-19	4	4
ENSTRUP00000052900	zf-met	PF12874.7	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050553	-	4150	XM_011604053	ENSTRUP00000052900	422 (aa)	XP_011602355	UPI0005D27F53

Gene Model

Click here to download ENSTRUG00000022194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022194	-	51	35.878	ENSTRUG00000007022	-	72	48.000
ENSTRUG00000022194	-	66	38.686	ENSTRUG00000020582	-	96	47.436
ENSTRUG00000022194	-	53	34.862	ENSTRUG00000004744	gfi1aa	64	34.862
ENSTRUG00000022194	-	61	35.461	ENSTRUG00000022076	-	80	40.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022194	-	51	39.535	ENSPNYG00000007756	-	87	37.692	Pundamilia_nyererei
ENSTRUG00000022194	-	55	35.507	ENSSLDG00000023661	-	98	35.507	Seriola_lalandi_dorsalis