EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022206 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6910 bases
Position: chrHE591764.1:41178-48087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	1	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	2	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	3	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	4	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	5	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	6	7
ENSTRUP00000051894	zf-C2H2	PF00096.26	7.8e-39	7	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	1	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	2	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	3	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	4	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	5	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	6	7
ENSTRUP00000049563	zf-C2H2	PF00096.26	1e-38	7	7
ENSTRUP00000049329	zf-C2H2	PF00096.26	2.7e-16	1	3
ENSTRUP00000049329	zf-C2H2	PF00096.26	2.7e-16	2	3
ENSTRUP00000049329	zf-C2H2	PF00096.26	2.7e-16	3	3
ENSTRUP00000051894	zf-met	PF12874.7	5.7e-09	1	2
ENSTRUP00000051894	zf-met	PF12874.7	5.7e-09	2	2
ENSTRUP00000049563	zf-met	PF12874.7	6.6e-09	1	2
ENSTRUP00000049563	zf-met	PF12874.7	6.6e-09	2	2
ENSTRUP00000049329	zf-met	PF12874.7	7.3e-07	1	2
ENSTRUP00000049329	zf-met	PF12874.7	7.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054763	-	1134	-	ENSTRUP00000049329	377 (aa)	-	-
ENSTRUT00000058089	-	3015	-	ENSTRUP00000051894	521 (aa)	-	-
ENSTRUT00000052744	-	3301	-	ENSTRUP00000049563	528 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000022206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022206	-	58	37.154	ENSTRUG00000012157	-	90	37.154
ENSTRUG00000022206	-	56	39.442	ENSTRUG00000022666	-	50	43.396
ENSTRUG00000022206	-	58	41.593	ENSTRUG00000024073	-	63	41.176
ENSTRUG00000022206	-	86	75.839	ENSTRUG00000022515	-	100	75.839
ENSTRUG00000022206	-	54	31.250	ENSTRUG00000019941	-	61	31.250
ENSTRUG00000022206	-	73	47.500	ENSTRUG00000013850	prdm5	78	47.500
ENSTRUG00000022206	-	98	43.069	ENSTRUG00000022076	-	92	43.069
ENSTRUG00000022206	-	56	33.659	ENSTRUG00000001452	PRDM15	57	33.659
ENSTRUG00000022206	-	64	39.149	ENSTRUG00000009203	zbtb41	55	39.149
ENSTRUG00000022206	-	64	62.536	ENSTRUG00000022919	-	94	62.536
ENSTRUG00000022206	-	52	50.000	ENSTRUG00000003277	zbtb17	91	52.055
ENSTRUG00000022206	-	87	65.253	ENSTRUG00000020208	-	97	65.385
ENSTRUG00000022206	-	56	34.579	ENSTRUG00000020495	si:dkey-89b17.4	80	34.579
ENSTRUG00000022206	-	61	44.726	ENSTRUG00000015687	-	94	49.206
ENSTRUG00000022206	-	83	43.056	ENSTRUG00000016839	zbtb20	50	42.342
ENSTRUG00000022206	-	55	36.327	ENSTRUG00000019685	znf319b	84	36.327
ENSTRUG00000022206	-	98	45.525	ENSTRUG00000019483	-	99	48.000
ENSTRUG00000022206	-	54	40.580	ENSTRUG00000022843	-	67	39.301
ENSTRUG00000022206	-	97	56.475	ENSTRUG00000007022	-	96	56.475
ENSTRUG00000022206	-	100	81.766	ENSTRUG00000001268	-	98	81.765
ENSTRUG00000022206	-	56	69.663	ENSTRUG00000003111	-	95	69.663
ENSTRUG00000022206	-	84	47.163	ENSTRUG00000006896	-	96	48.837
ENSTRUG00000022206	-	59	40.299	ENSTRUG00000025588	snai2	75	37.302
ENSTRUG00000022206	-	58	43.810	ENSTRUG00000017456	znf236	65	43.810
ENSTRUG00000022206	-	57	42.918	ENSTRUG00000025881	-	66	43.290
ENSTRUG00000022206	-	57	37.853	ENSTRUG00000014476	-	85	37.853
ENSTRUG00000022206	-	75	44.706	ENSTRUG00000022905	-	67	44.706
ENSTRUG00000022206	-	58	33.945	ENSTRUG00000006180	si:ch211-216l23.1	76	35.366
ENSTRUG00000022206	-	100	46.460	ENSTRUG00000020582	-	100	46.460
ENSTRUG00000022206	-	56	67.568	ENSTRUG00000025189	-	64	67.568
ENSTRUG00000022206	-	97	38.202	ENSTRUG00000021167	-	99	38.202
ENSTRUG00000022206	-	57	41.758	ENSTRUG00000021675	-	80	41.418
ENSTRUG00000022206	-	56	43.719	ENSTRUG00000005880	-	54	43.043
ENSTRUG00000022206	-	57	63.830	ENSTRUG00000005180	-	86	69.767
ENSTRUG00000022206	-	81	73.759	ENSTRUG00000023925	-	96	73.759
ENSTRUG00000022206	-	86	50.213	ENSTRUG00000012273	-	99	48.810
ENSTRUG00000022206	-	58	49.367	ENSTRUG00000019940	-	52	49.367
ENSTRUG00000022206	-	70	38.583	ENSTRUG00000025597	znf646	76	37.857
ENSTRUG00000022206	-	55	44.541	ENSTRUG00000022066	-	89	44.253
ENSTRUG00000022206	-	98	69.665	ENSTRUG00000021765	-	98	64.184
ENSTRUG00000022206	-	63	40.000	ENSTRUG00000005321	-	99	41.270
ENSTRUG00000022206	-	52	43.750	ENSTRUG00000011637	scrt1b	51	43.750
ENSTRUG00000022206	-	72	36.546	ENSTRUG00000008615	zbtb48	56	36.546
ENSTRUG00000022206	-	51	37.500	ENSTRUG00000000419	sna2	60	43.689
ENSTRUG00000022206	-	58	51.546	ENSTRUG00000013906	-	92	64.754
ENSTRUG00000022206	-	98	74.853	ENSTRUG00000000995	-	99	74.853
ENSTRUG00000022206	-	73	40.187	ENSTRUG00000023491	-	94	40.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022206	-	51	53.922	ENSAPOG00000005767	-	100	53.922	Acanthochromis_polyacanthus
ENSTRUG00000022206	-	82	54.082	ENSAOCG00000000570	-	97	54.082	Amphiprion_ocellaris
ENSTRUG00000022206	-	81	51.124	ENSAPEG00000018796	-	95	51.124	Amphiprion_percula
ENSTRUG00000022206	-	75	36.025	ENSCVAG00000018507	-	94	38.583	Cyprinodon_variegatus
ENSTRUG00000022206	-	55	41.048	ENSFHEG00000022534	-	78	41.048	Fundulus_heteroclitus
ENSTRUG00000022206	-	91	39.459	ENSKMAG00000013239	-	60	39.459	Kryptolebias_marmoratus
ENSTRUG00000022206	-	93	47.788	ENSKMAG00000013745	-	99	47.788	Kryptolebias_marmoratus
ENSTRUG00000022206	-	99	51.208	ENSMAMG00000018114	-	94	51.208	Mastacembelus_armatus
ENSTRUG00000022206	-	55	40.598	ENSMAMG00000009817	-	70	48.438	Mastacembelus_armatus
ENSTRUG00000022206	-	91	51.759	ENSMZEG00005016808	-	98	51.759	Maylandia_zebra
ENSTRUG00000022206	-	84	52.800	ENSMALG00000012757	-	91	52.800	Monopterus_albus
ENSTRUG00000022206	-	64	49.049	ENSMALG00000001085	-	97	49.049	Monopterus_albus
ENSTRUG00000022206	-	71	46.269	ENSMALG00000004579	-	94	58.095	Monopterus_albus
ENSTRUG00000022206	-	97	54.622	ENSMALG00000008930	-	99	54.622	Monopterus_albus
ENSTRUG00000022206	-	57	56.831	ENSMALG00000012116	-	95	56.831	Monopterus_albus
ENSTRUG00000022206	-	80	54.545	ENSNBRG00000013501	-	97	54.545	Neolamprologus_brichardi
ENSTRUG00000022206	-	61	38.577	ENSOMEG00000021420	-	63	44.538	Oryzias_melastigma
ENSTRUG00000022206	-	56	36.255	ENSPREG00000014898	-	66	34.568	Poecilia_reticulata
ENSTRUG00000022206	-	59	49.112	ENSPNYG00000007756	-	77	46.667	Pundamilia_nyererei
ENSTRUG00000022206	-	55	50.758	ENSSDUG00000001263	-	88	52.174	Seriola_dumerili
ENSTRUG00000022206	-	54	40.000	ENSSLDG00000023661	-	84	48.062	Seriola_lalandi_dorsalis
ENSTRUG00000022206	-	56	50.644	ENSTNIG00000005856	-	99	50.644	Tetraodon_nigroviridis
ENSTRUG00000022206	-	64	47.234	ENSXCOG00000019492	-	97	47.619	Xiphophorus_couchianus
ENSTRUG00000022206	-	56	49.065	ENSXMAG00000022297	-	99	49.065	Xiphophorus_maculatus