EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000022273 (Gene tree)
Gene ID: -
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2205 bases
Position: chr19:8280849-8283053
Accession: ZDB-GENE-040801-167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000050375	Ribosomal_L29e	PF01779.17	3.8e-24	1	1
ENSTRUP00000052812	Ribosomal_L29e	PF01779.17	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055708	-	1423	-	ENSTRUP00000052812	74 (aa)	-	-
ENSTRUT00000057537	-	718	-	ENSTRUP00000050375	65 (aa)	-	H2T3S4

Gene Model

Click here to download ENSTRUG00000022273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022273	rpl29	71	86.957	ENSG00000162244	RPL29	97	80.556	Homo_sapiens
ENSTRUG00000022273	rpl29	82	84.906	ENSAPOG00000002586	rpl29	95	81.967	Acanthochromis_polyacanthus
ENSTRUG00000022273	rpl29	82	88.679	ENSACIG00000018340	rpl29	97	85.484	Amphilophus_citrinellus
ENSTRUG00000022273	rpl29	82	88.679	ENSAOCG00000016652	rpl29	98	82.540	Amphiprion_ocellaris
ENSTRUG00000022273	rpl29	82	88.679	ENSAPEG00000005754	rpl29	98	82.540	Amphiprion_percula
ENSTRUG00000022273	rpl29	97	82.812	ENSATEG00000024991	rpl29	60	56.790	Anabas_testudineus
ENSTRUG00000022273	rpl29	71	89.130	ENSACAG00000006888	RPL29	89	86.207	Anolis_carolinensis
ENSTRUG00000022273	rpl29	71	86.957	ENSANAG00000024147	-	77	71.739	Aotus_nancymaae
ENSTRUG00000022273	rpl29	97	84.127	ENSACLG00000017820	rpl29	98	84.127	Astatotilapia_calliptera
ENSTRUG00000022273	rpl29	98	78.125	ENSAMXG00000038794	rpl29	97	80.645	Astyanax_mexicanus
ENSTRUG00000022273	rpl29	80	63.462	WBGene00004443	rpl-29	84	63.462	Caenorhabditis_elegans
ENSTRUG00000022273	rpl29	71	86.957	ENSCJAG00000042339	-	77	71.739	Callithrix_jacchus
ENSTRUG00000022273	rpl29	71	86.957	ENSCCAG00000027980	-	77	71.739	Cebus_capucinus
ENSTRUG00000022273	rpl29	77	78.431	ENSCSAG00000017871	-	58	69.231	Chlorocebus_sabaeus
ENSTRUG00000022273	rpl29	66	75.000	ENSCPBG00000016679	-	57	75.000	Chrysemys_picta_bellii
ENSTRUG00000022273	rpl29	80	73.077	ENSCING00000018496	-	90	73.077	Ciona_intestinalis
ENSTRUG00000022273	rpl29	80	73.077	ENSCSAVG00000005231	-	88	73.077	Ciona_savignyi
ENSTRUG00000022273	rpl29	71	86.957	ENSCGRG00001016452	-	85	82.759	Cricetulus_griseus_chok1gshd
ENSTRUG00000022273	rpl29	77	90.000	ENSCSEG00000010267	rpl29	100	87.879	Cynoglossus_semilaevis
ENSTRUG00000022273	rpl29	77	88.000	ENSCVAG00000023098	rpl29	98	87.302	Cyprinodon_variegatus
ENSTRUG00000022273	rpl29	97	81.250	ENSDARG00000077717	rpl29	100	81.250	Danio_rerio
ENSTRUG00000022273	rpl29	91	57.627	FBgn0016726	RpL29	78	57.627	Drosophila_melanogaster
ENSTRUG00000022273	rpl29	66	76.744	ENSEASG00005005507	-	66	76.744	Equus_asinus_asinus
ENSTRUG00000022273	rpl29	94	78.689	ENSELUG00000015592	RL29	87	78.689	Esox_lucius
ENSTRUG00000022273	rpl29	80	67.308	ENSFCAG00000043006	-	64	67.308	Felis_catus
ENSTRUG00000022273	rpl29	98	50.000	ENSFCAG00000035470	-	58	63.636	Felis_catus
ENSTRUG00000022273	rpl29	71	86.957	ENSFALG00000008925	RPL29	99	77.612	Ficedula_albicollis
ENSTRUG00000022273	rpl29	97	85.714	ENSFHEG00000015425	rpl29	98	85.714	Fundulus_heteroclitus
ENSTRUG00000022273	rpl29	82	90.566	ENSGMOG00000003626	rpl29	84	87.500	Gadus_morhua
ENSTRUG00000022273	rpl29	71	86.957	ENSGALG00000026978	RPL29	82	82.759	Gallus_gallus
ENSTRUG00000022273	rpl29	97	87.302	ENSGAFG00000012868	rpl29	98	87.302	Gambusia_affinis
ENSTRUG00000022273	rpl29	98	81.250	ENSGACG00000007041	rpl29	83	81.250	Gasterosteus_aculeatus
ENSTRUG00000022273	rpl29	71	68.750	ENSGAGG00000024203	-	89	68.750	Gopherus_agassizii
ENSTRUG00000022273	rpl29	71	86.957	ENSGGOG00000024691	RPL29	62	81.081	Gorilla_gorilla
ENSTRUG00000022273	rpl29	97	84.127	ENSHBUG00000010519	rpl29	98	84.127	Haplochromis_burtoni
ENSTRUG00000022273	rpl29	77	90.000	ENSHCOG00000000478	rpl29	79	88.710	Hippocampus_comes
ENSTRUG00000022273	rpl29	95	80.645	ENSIPUG00000001196	rpl29	97	80.645	Ictalurus_punctatus
ENSTRUG00000022273	rpl29	82	88.679	ENSKMAG00000011291	rpl29	97	85.484	Kryptolebias_marmoratus
ENSTRUG00000022273	rpl29	82	88.679	ENSLBEG00000016213	rpl29	91	83.871	Labrus_bergylta
ENSTRUG00000022273	rpl29	94	83.607	ENSLACG00000018622	rpl29	95	83.607	Latimeria_chalumnae
ENSTRUG00000022273	rpl29	89	84.483	ENSLACG00000018031	-	90	83.607	Latimeria_chalumnae
ENSTRUG00000022273	rpl29	71	84.783	ENSLOCG00000013798	rpl29	100	76.923	Lepisosteus_oculatus
ENSTRUG00000022273	rpl29	82	92.453	ENSMAMG00000014274	rpl29	67	87.692	Mastacembelus_armatus
ENSTRUG00000022273	rpl29	97	84.127	ENSMZEG00005013519	rpl29	98	84.127	Maylandia_zebra
ENSTRUG00000022273	rpl29	71	86.957	ENSMGAG00000001213	RPL29	82	82.759	Meleagris_gallopavo
ENSTRUG00000022273	rpl29	75	73.469	ENSMICG00000049466	-	74	73.469	Microcebus_murinus
ENSTRUG00000022273	rpl29	97	84.127	ENSMMOG00000010430	rpl29	98	84.127	Mola_mola
ENSTRUG00000022273	rpl29	82	90.566	ENSMALG00000009023	rpl29	82	86.154	Monopterus_albus
ENSTRUG00000022273	rpl29	71	86.957	ENSMUSG00000048758	Rpl29	94	78.125	Mus_musculus
ENSTRUG00000022273	rpl29	97	84.127	ENSNBRG00000022109	rpl29	98	84.127	Neolamprologus_brichardi
ENSTRUG00000022273	rpl29	97	84.127	ENSONIG00000014377	rpl29	100	84.127	Oreochromis_niloticus
ENSTRUG00000022273	rpl29	97	87.302	ENSORLG00000023610	rpl29	66	87.302	Oryzias_latipes
ENSTRUG00000022273	rpl29	97	87.302	ENSORLG00020018665	rpl29	66	87.302	Oryzias_latipes_hni
ENSTRUG00000022273	rpl29	97	87.302	ENSORLG00015014455	rpl29	66	87.302	Oryzias_latipes_hsok
ENSTRUG00000022273	rpl29	97	87.302	ENSOMEG00000019919	rpl29	98	87.302	Oryzias_melastigma
ENSTRUG00000022273	rpl29	57	81.081	ENSPPAG00000037142	-	63	81.081	Pan_paniscus
ENSTRUG00000022273	rpl29	91	64.407	ENSPPRG00000011689	-	80	69.231	Panthera_pardus
ENSTRUG00000022273	rpl29	91	62.712	ENSPTIG00000011913	-	72	62.712	Panthera_tigris_altaica
ENSTRUG00000022273	rpl29	71	86.957	ENSPTRG00000043237	RPL29	63	81.081	Pan_troglodytes
ENSTRUG00000022273	rpl29	71	86.957	ENSPKIG00000025048	rpl29	91	83.333	Paramormyrops_kingsleyae
ENSTRUG00000022273	rpl29	71	86.957	ENSPSIG00000014699	RPL29	92	84.483	Pelodiscus_sinensis
ENSTRUG00000022273	rpl29	98	81.250	ENSPMGG00000005361	rpl29	94	81.250	Periophthalmus_magnuspinnatus
ENSTRUG00000022273	rpl29	94	88.525	ENSPFOG00000011385	rpl29	100	88.525	Poecilia_formosa
ENSTRUG00000022273	rpl29	77	88.000	ENSPLAG00000012042	rpl29	98	87.302	Poecilia_latipinna
ENSTRUG00000022273	rpl29	77	90.000	ENSPMEG00000018297	rpl29	98	88.889	Poecilia_mexicana
ENSTRUG00000022273	rpl29	77	90.000	ENSPREG00000007066	rpl29	98	88.889	Poecilia_reticulata
ENSTRUG00000022273	rpl29	97	84.127	ENSPNYG00000019481	rpl29	98	84.127	Pundamilia_nyererei
ENSTRUG00000022273	rpl29	95	82.258	ENSPNAG00000007550	rpl29	97	82.258	Pygocentrus_nattereri
ENSTRUG00000022273	rpl29	71	78.261	ENSRNOG00000021843	AABR07072463.1	53	71.875	Rattus_norvegicus
ENSTRUG00000022273	rpl29	86	74.138	ENSRNOG00000025794	AABR07021239.1	77	74.138	Rattus_norvegicus
ENSTRUG00000022273	rpl29	71	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSTRUG00000022273	rpl29	82	88.679	ENSSMAG00000013571	rpl29	97	85.484	Scophthalmus_maximus
ENSTRUG00000022273	rpl29	77	90.000	ENSSDUG00000016140	rpl29	98	87.302	Seriola_dumerili
ENSTRUG00000022273	rpl29	71	63.830	ENSSDUG00000020458	-	76	63.830	Seriola_dumerili
ENSTRUG00000022273	rpl29	77	90.000	ENSSLDG00000003932	rpl29	98	87.302	Seriola_lalandi_dorsalis
ENSTRUG00000022273	rpl29	71	86.957	ENSSPUG00000003760	RPL29	92	84.483	Sphenodon_punctatus
ENSTRUG00000022273	rpl29	82	90.566	ENSSPAG00000020292	rpl29	95	85.246	Stegastes_partitus
ENSTRUG00000022273	rpl29	89	58.621	ENSSSCG00000031314	-	92	58.621	Sus_scrofa
ENSTRUG00000022273	rpl29	60	84.615	ENSSSCG00000037047	-	100	81.633	Sus_scrofa
ENSTRUG00000022273	rpl29	71	86.957	ENSTGUG00000006027	RPL29	92	82.759	Taeniopygia_guttata
ENSTRUG00000022273	rpl29	83	94.444	ENSTNIG00000014816	rpl29	94	90.625	Tetraodon_nigroviridis
ENSTRUG00000022273	rpl29	95	67.742	ENSTBEG00000000807	-	76	67.742	Tupaia_belangeri
ENSTRUG00000022273	rpl29	74	83.333	ENSUAMG00000002601	-	84	83.333	Ursus_americanus
ENSTRUG00000022273	rpl29	71	82.609	ENSVVUG00000012400	-	100	80.702	Vulpes_vulpes
ENSTRUG00000022273	rpl29	71	86.957	ENSXETG00000010811	rpl29	73	87.273	Xenopus_tropicalis
ENSTRUG00000022273	rpl29	94	86.885	ENSXCOG00000013543	rpl29	95	86.885	Xiphophorus_couchianus
ENSTRUG00000022273	rpl29	97	87.302	ENSXMAG00000020948	rpl29	98	87.302	Xiphophorus_maculatus