EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022374 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: si:dkey-33c12.4
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6417 bases
Position: chr2:11367437-11373853
Accession: ZDB-GENE-030131-2527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051712	RRM_1	PF00076.22	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051228	-	3944	-	ENSTRUP00000051712	649 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000022374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022374	si:dkey-33c12.4	51	30.618	ENSTRUG00000024824	zgc:123010	54	42.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022374	si:dkey-33c12.4	90	46.271	ENSAPOG00000005058	si:dkey-33c12.4	54	60.393	Acanthochromis_polyacanthus
ENSTRUG00000022374	si:dkey-33c12.4	51	31.180	ENSAPOG00000019633	zgc:123010	58	30.899	Acanthochromis_polyacanthus
ENSTRUG00000022374	si:dkey-33c12.4	51	30.878	ENSACIG00000021684	zgc:123010	71	41.958	Amphilophus_citrinellus
ENSTRUG00000022374	si:dkey-33c12.4	51	31.180	ENSAOCG00000005910	zgc:123010	58	30.899	Amphiprion_ocellaris
ENSTRUG00000022374	si:dkey-33c12.4	89	46.719	ENSAOCG00000020066	si:dkey-33c12.4	96	47.031	Amphiprion_ocellaris
ENSTRUG00000022374	si:dkey-33c12.4	51	31.180	ENSAPEG00000014305	zgc:123010	62	30.899	Amphiprion_percula
ENSTRUG00000022374	si:dkey-33c12.4	51	32.303	ENSATEG00000001220	zgc:123010	58	32.303	Anabas_testudineus
ENSTRUG00000022374	si:dkey-33c12.4	91	48.913	ENSATEG00000018885	si:dkey-33c12.4	56	61.972	Anabas_testudineus
ENSTRUG00000022374	si:dkey-33c12.4	94	45.560	ENSACLG00000014192	si:dkey-33c12.4	62	54.839	Astatotilapia_calliptera
ENSTRUG00000022374	si:dkey-33c12.4	51	32.951	ENSAMXG00000041967	zgc:123010	52	42.254	Astyanax_mexicanus
ENSTRUG00000022374	si:dkey-33c12.4	77	38.015	ENSAMXG00000010871	si:dkey-33c12.4	57	42.368	Astyanax_mexicanus
ENSTRUG00000022374	si:dkey-33c12.4	77	32.037	ENSCPBG00000024454	-	54	36.220	Chrysemys_picta_bellii
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSCVAG00000013288	zgc:123010	59	32.022	Cyprinodon_variegatus
ENSTRUG00000022374	si:dkey-33c12.4	90	45.055	ENSCVAG00000006564	-	99	43.887	Cyprinodon_variegatus
ENSTRUG00000022374	si:dkey-33c12.4	52	39.943	ENSDARG00000057890	si:dkey-33c12.4	52	40.456	Danio_rerio
ENSTRUG00000022374	si:dkey-33c12.4	76	32.781	ENSELUG00000001633	-	58	36.148	Esox_lucius
ENSTRUG00000022374	si:dkey-33c12.4	87	36.405	ENSELUG00000002009	si:dkey-33c12.4	89	43.881	Esox_lucius
ENSTRUG00000022374	si:dkey-33c12.4	51	32.303	ENSELUG00000022008	zgc:123010	72	43.448	Esox_lucius
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSFHEG00000002306	zgc:123010	59	41.379	Fundulus_heteroclitus
ENSTRUG00000022374	si:dkey-33c12.4	90	46.533	ENSFHEG00000005521	si:dkey-33c12.4	62	57.398	Fundulus_heteroclitus
ENSTRUG00000022374	si:dkey-33c12.4	61	36.893	ENSFHEG00000009983	-	53	40.439	Fundulus_heteroclitus
ENSTRUG00000022374	si:dkey-33c12.4	53	30.376	ENSGMOG00000018473	zgc:123010	84	30.376	Gadus_morhua
ENSTRUG00000022374	si:dkey-33c12.4	52	33.828	ENSGALG00000036747	TTC31	58	33.841	Gallus_gallus
ENSTRUG00000022374	si:dkey-33c12.4	90	44.599	ENSGAFG00000017596	si:dkey-33c12.4	99	41.301	Gambusia_affinis
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSGAFG00000009373	zgc:123010	56	39.130	Gambusia_affinis
ENSTRUG00000022374	si:dkey-33c12.4	53	51.966	ENSGACG00000004936	-	95	51.966	Gasterosteus_aculeatus
ENSTRUG00000022374	si:dkey-33c12.4	51	30.812	ENSGACG00000007620	zgc:123010	81	30.812	Gasterosteus_aculeatus
ENSTRUG00000022374	si:dkey-33c12.4	90	46.747	ENSHBUG00000010735	si:dkey-33c12.4	59	56.203	Haplochromis_burtoni
ENSTRUG00000022374	si:dkey-33c12.4	77	36.036	ENSIPUG00000005998	si:dkey-33c12.4	52	43.503	Ictalurus_punctatus
ENSTRUG00000022374	si:dkey-33c12.4	90	46.202	ENSKMAG00000016610	si:dkey-33c12.4	99	44.168	Kryptolebias_marmoratus
ENSTRUG00000022374	si:dkey-33c12.4	51	32.303	ENSKMAG00000021350	zgc:123010	59	32.303	Kryptolebias_marmoratus
ENSTRUG00000022374	si:dkey-33c12.4	53	30.811	ENSLBEG00000013518	-	58	40.909	Labrus_bergylta
ENSTRUG00000022374	si:dkey-33c12.4	79	30.993	ENSLBEG00000028046	-	56	36.512	Labrus_bergylta
ENSTRUG00000022374	si:dkey-33c12.4	91	48.362	ENSLBEG00000021088	-	58	60.111	Labrus_bergylta
ENSTRUG00000022374	si:dkey-33c12.4	83	48.142	ENSLBEG00000017203	-	52	61.736	Labrus_bergylta
ENSTRUG00000022374	si:dkey-33c12.4	51	33.708	ENSLBEG00000023984	zgc:123010	55	43.448	Labrus_bergylta
ENSTRUG00000022374	si:dkey-33c12.4	50	32.665	ENSLACG00000004602	-	59	32.378	Latimeria_chalumnae
ENSTRUG00000022374	si:dkey-33c12.4	79	36.823	ENSLOCG00000001861	-	53	42.090	Lepisosteus_oculatus
ENSTRUG00000022374	si:dkey-33c12.4	51	31.198	ENSLOCG00000008967	zgc:123010	60	31.755	Lepisosteus_oculatus
ENSTRUG00000022374	si:dkey-33c12.4	91	47.222	ENSMAMG00000000111	si:dkey-33c12.4	99	48.086	Mastacembelus_armatus
ENSTRUG00000022374	si:dkey-33c12.4	90	46.073	ENSMZEG00005014276	si:dkey-33c12.4	59	55.556	Maylandia_zebra
ENSTRUG00000022374	si:dkey-33c12.4	53	38.736	ENSMZEG00005000585	-	52	41.587	Maylandia_zebra
ENSTRUG00000022374	si:dkey-33c12.4	62	33.824	ENSMMOG00000010544	zgc:123010	61	41.791	Mola_mola
ENSTRUG00000022374	si:dkey-33c12.4	51	31.461	ENSMALG00000017698	zgc:123010	59	31.461	Monopterus_albus
ENSTRUG00000022374	si:dkey-33c12.4	91	47.193	ENSMALG00000002265	si:dkey-33c12.4	59	58.245	Monopterus_albus
ENSTRUG00000022374	si:dkey-33c12.4	65	33.824	ENSNBRG00000021157	zgc:123010	66	40.268	Neolamprologus_brichardi
ENSTRUG00000022374	si:dkey-33c12.4	52	56.000	ENSONIG00000012263	-	94	56.000	Oreochromis_niloticus
ENSTRUG00000022374	si:dkey-33c12.4	90	47.386	ENSORLG00000029651	si:dkey-33c12.4	59	60.055	Oryzias_latipes
ENSTRUG00000022374	si:dkey-33c12.4	88	47.746	ENSORLG00020008750	si:dkey-33c12.4	55	60.331	Oryzias_latipes_hni
ENSTRUG00000022374	si:dkey-33c12.4	90	44.228	ENSOMEG00000008913	-	58	57.292	Oryzias_melastigma
ENSTRUG00000022374	si:dkey-33c12.4	77	38.158	ENSPKIG00000011819	-	53	41.389	Paramormyrops_kingsleyae
ENSTRUG00000022374	si:dkey-33c12.4	57	30.380	ENSPKIG00000015521	zgc:123010	71	37.427	Paramormyrops_kingsleyae
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSPFOG00000001073	zgc:123010	55	40.690	Poecilia_formosa
ENSTRUG00000022374	si:dkey-33c12.4	90	46.330	ENSPFOG00000009143	si:dkey-33c12.4	99	44.684	Poecilia_formosa
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSPLAG00000007711	zgc:123010	55	40.690	Poecilia_latipinna
ENSTRUG00000022374	si:dkey-33c12.4	80	50.439	ENSPLAG00000022537	si:dkey-33c12.4	98	45.177	Poecilia_latipinna
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSPMEG00000005092	zgc:123010	55	40.690	Poecilia_mexicana
ENSTRUG00000022374	si:dkey-33c12.4	90	45.872	ENSPMEG00000015590	si:dkey-33c12.4	99	44.376	Poecilia_mexicana
ENSTRUG00000022374	si:dkey-33c12.4	53	39.011	ENSPNYG00000001047	-	56	40.000	Pundamilia_nyererei
ENSTRUG00000022374	si:dkey-33c12.4	90	46.224	ENSPNYG00000018262	si:dkey-33c12.4	59	55.808	Pundamilia_nyererei
ENSTRUG00000022374	si:dkey-33c12.4	52	45.739	ENSPNAG00000018386	si:dkey-33c12.4	52	45.954	Pygocentrus_nattereri
ENSTRUG00000022374	si:dkey-33c12.4	52	31.653	ENSPNAG00000007579	zgc:123010	61	30.874	Pygocentrus_nattereri
ENSTRUG00000022374	si:dkey-33c12.4	57	31.566	ENSSFOG00015021394	zgc:123010	67	31.510	Scleropages_formosus
ENSTRUG00000022374	si:dkey-33c12.4	51	42.442	ENSSFOG00015005186	-	54	41.860	Scleropages_formosus
ENSTRUG00000022374	si:dkey-33c12.4	72	37.275	ENSSFOG00015009199	-	58	40.260	Scleropages_formosus
ENSTRUG00000022374	si:dkey-33c12.4	91	48.421	ENSSMAG00000008147	si:dkey-33c12.4	57	58.901	Scophthalmus_maximus
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSSDUG00000008651	zgc:123010	58	31.461	Seriola_dumerili
ENSTRUG00000022374	si:dkey-33c12.4	53	31.016	ENSSDUG00000014026	-	58	40.909	Seriola_dumerili
ENSTRUG00000022374	si:dkey-33c12.4	91	47.713	ENSSDUG00000003213	si:dkey-33c12.4	63	58.568	Seriola_dumerili
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSSLDG00000019386	zgc:123010	61	31.461	Seriola_lalandi_dorsalis
ENSTRUG00000022374	si:dkey-33c12.4	91	46.960	ENSSLDG00000009448	si:dkey-33c12.4	59	58.568	Seriola_lalandi_dorsalis
ENSTRUG00000022374	si:dkey-33c12.4	51	32.022	ENSSPAG00000013621	zgc:123010	58	32.022	Stegastes_partitus
ENSTRUG00000022374	si:dkey-33c12.4	90	46.529	ENSSPAG00000022577	-	59	57.179	Stegastes_partitus
ENSTRUG00000022374	si:dkey-33c12.4	57	56.568	ENSTNIG00000010542	-	91	77.987	Tetraodon_nigroviridis
ENSTRUG00000022374	si:dkey-33c12.4	50	31.728	ENSXCOG00000012281	zgc:123010	72	31.728	Xiphophorus_couchianus
ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	ENSXMAG00000002598	zgc:123010	55	40.690	Xiphophorus_maculatus
ENSTRUG00000022374	si:dkey-33c12.4	90	45.666	ENSXMAG00000018535	si:dkey-33c12.4	99	44.817	Xiphophorus_maculatus