EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000022463 (Gene tree)
Gene ID: 101065527
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4354 bases
Position: chr11:4910242-4914595
Accession: 101065527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055827	MMR_HSR1	PF01926.23	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050673	-	3654	XM_003968409	ENSTRUP00000055827	275 (aa)	XP_003968458	UPI000298958B

Gene Model

Click here to download ENSTRUG00000022463's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022463	srprb	100	86.282	ENSAPOG00000021219	srprb	100	86.282	Acanthochromis_polyacanthus
ENSTRUG00000022463	srprb	97	87.218	ENSACIG00000014621	srprb	100	87.218	Amphilophus_citrinellus
ENSTRUG00000022463	srprb	100	86.282	ENSAOCG00000017265	srprb	100	86.282	Amphiprion_ocellaris
ENSTRUG00000022463	srprb	100	86.282	ENSAPEG00000024541	srprb	88	86.282	Amphiprion_percula
ENSTRUG00000022463	srprb	100	84.000	ENSATEG00000014016	srprb	100	84.000	Anabas_testudineus
ENSTRUG00000022463	srprb	100	85.870	ENSACLG00000016748	srprb	100	84.783	Astatotilapia_calliptera
ENSTRUG00000022463	srprb	97	69.173	ENSAMXG00000044118	srprb	100	69.173	Astyanax_mexicanus
ENSTRUG00000022463	srprb	99	82.418	ENSCSEG00000017194	srprb	99	82.418	Cynoglossus_semilaevis
ENSTRUG00000022463	srprb	97	83.835	ENSCVAG00000004221	srprb	100	83.835	Cyprinodon_variegatus
ENSTRUG00000022463	srprb	97	67.293	ENSDARG00000030949	srprb	100	67.293	Danio_rerio
ENSTRUG00000022463	srprb	96	77.947	ENSELUG00000009740	srprb	97	77.947	Esox_lucius
ENSTRUG00000022463	srprb	97	84.211	ENSFHEG00000006004	srprb	100	84.211	Fundulus_heteroclitus
ENSTRUG00000022463	srprb	99	78.598	ENSGMOG00000002081	srprb	100	78.598	Gadus_morhua
ENSTRUG00000022463	srprb	96	85.227	ENSGAFG00000012593	srprb	99	85.227	Gambusia_affinis
ENSTRUG00000022463	srprb	99	85.240	ENSGACG00000009891	srprb	100	85.240	Gasterosteus_aculeatus
ENSTRUG00000022463	srprb	100	85.870	ENSHBUG00000002145	srprb	100	84.783	Haplochromis_burtoni
ENSTRUG00000022463	srprb	98	81.784	ENSHCOG00000007732	srprb	99	81.784	Hippocampus_comes
ENSTRUG00000022463	srprb	97	64.419	ENSIPUG00000004177	srprb	100	63.670	Ictalurus_punctatus
ENSTRUG00000022463	srprb	97	81.955	ENSKMAG00000020736	srprb	100	81.955	Kryptolebias_marmoratus
ENSTRUG00000022463	srprb	100	85.091	ENSLBEG00000021483	srprb	100	85.091	Labrus_bergylta
ENSTRUG00000022463	srprb	97	68.030	ENSLOCG00000009740	srprb	90	67.286	Lepisosteus_oculatus
ENSTRUG00000022463	srprb	100	85.818	ENSMAMG00000011876	srprb	100	85.818	Mastacembelus_armatus
ENSTRUG00000022463	srprb	94	86.486	ENSMZEG00005016621	srprb	100	85.328	Maylandia_zebra
ENSTRUG00000022463	srprb	97	84.701	ENSMMOG00000012550	srprb	99	84.328	Mola_mola
ENSTRUG00000022463	srprb	100	82.545	ENSMALG00000012595	srprb	100	82.545	Monopterus_albus
ENSTRUG00000022463	srprb	75	87.379	ENSNBRG00000004699	srprb	95	81.416	Neolamprologus_brichardi
ENSTRUG00000022463	srprb	100	85.455	ENSONIG00000003788	srprb	82	85.455	Oreochromis_niloticus
ENSTRUG00000022463	srprb	99	79.705	ENSORLG00000006430	srprb	99	79.705	Oryzias_latipes
ENSTRUG00000022463	srprb	99	80.074	ENSORLG00020003413	srprb	99	80.074	Oryzias_latipes_hni
ENSTRUG00000022463	srprb	99	80.074	ENSORLG00015000166	srprb	99	80.074	Oryzias_latipes_hsok
ENSTRUG00000022463	srprb	99	80.443	ENSOMEG00000012735	srprb	99	80.443	Oryzias_melastigma
ENSTRUG00000022463	srprb	97	67.416	ENSPKIG00000013147	srprb	99	67.416	Paramormyrops_kingsleyae
ENSTRUG00000022463	srprb	99	78.967	ENSPMGG00000014061	srprb	97	78.967	Periophthalmus_magnuspinnatus
ENSTRUG00000022463	srprb	96	85.227	ENSPFOG00000011347	srprb	96	85.227	Poecilia_formosa
ENSTRUG00000022463	srprb	94	86.047	ENSPLAG00000001156	srprb	100	86.047	Poecilia_latipinna
ENSTRUG00000022463	srprb	94	85.271	ENSPMEG00000012169	srprb	100	85.271	Poecilia_mexicana
ENSTRUG00000022463	srprb	94	84.109	ENSPREG00000001449	srprb	100	84.109	Poecilia_reticulata
ENSTRUG00000022463	srprb	100	85.870	ENSPNYG00000005911	srprb	100	84.783	Pundamilia_nyererei
ENSTRUG00000022463	srprb	97	68.797	ENSPNAG00000009983	srprb	100	68.797	Pygocentrus_nattereri
ENSTRUG00000022463	srprb	97	71.536	ENSSFOG00015019355	srprb	99	71.536	Scleropages_formosus
ENSTRUG00000022463	srprb	100	84.364	ENSSMAG00000013202	srprb	100	84.364	Scophthalmus_maximus
ENSTRUG00000022463	srprb	100	86.182	ENSSDUG00000018746	srprb	94	86.182	Seriola_dumerili
ENSTRUG00000022463	srprb	100	86.545	ENSSLDG00000020560	srprb	100	86.545	Seriola_lalandi_dorsalis
ENSTRUG00000022463	srprb	100	85.560	ENSSPAG00000008898	srprb	100	85.560	Stegastes_partitus
ENSTRUG00000022463	srprb	95	85.878	ENSTNIG00000007725	srprb	100	85.878	Tetraodon_nigroviridis
ENSTRUG00000022463	srprb	94	86.822	ENSXCOG00000012585	srprb	100	86.822	Xiphophorus_couchianus
ENSTRUG00000022463	srprb	94	86.434	ENSXMAG00000028725	srprb	100	86.434	Xiphophorus_maculatus