EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022515 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4346 bases
Position: chrHE593563.1:2789-7134
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	1	6
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	2	6
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	3	6
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	4	6
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	5	6
ENSTRUP00000052455	zf-C2H2	PF00096.26	1.2e-40	6	6
ENSTRUP00000052455	zf-met	PF12874.7	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054437	-	1423	-	ENSTRUP00000052455	444 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000022515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022515	-	57	44.068	ENSTRUG00000022076	-	93	44.068
ENSTRUG00000022515	-	62	79.191	ENSTRUG00000013906	-	92	79.191
ENSTRUG00000022515	-	61	70.034	ENSTRUG00000022919	-	88	73.606
ENSTRUG00000022515	-	60	42.767	ENSTRUG00000005321	-	95	46.296
ENSTRUG00000022515	-	100	69.748	ENSTRUG00000000995	-	99	73.438
ENSTRUG00000022515	-	52	45.930	ENSTRUG00000019940	-	51	45.930
ENSTRUG00000022515	-	100	75.839	ENSTRUG00000022206	-	86	75.839
ENSTRUG00000022515	-	100	81.184	ENSTRUG00000021765	-	97	82.921
ENSTRUG00000022515	-	88	52.459	ENSTRUG00000012273	-	99	52.459
ENSTRUG00000022515	-	53	47.500	ENSTRUG00000025881	-	66	45.588
ENSTRUG00000022515	-	51	43.373	ENSTRUG00000024073	-	62	43.373
ENSTRUG00000022515	-	51	45.283	ENSTRUG00000017456	znf236	61	45.283
ENSTRUG00000022515	-	87	94.118	ENSTRUG00000007022	-	87	94.118
ENSTRUG00000022515	-	51	68.000	ENSTRUG00000005180	-	82	68.000
ENSTRUG00000022515	-	60	38.636	ENSTRUG00000009203	zbtb41	55	38.636
ENSTRUG00000022515	-	50	34.320	ENSTRUG00000001452	PRDM15	53	34.320
ENSTRUG00000022515	-	87	70.065	ENSTRUG00000020208	-	97	72.414
ENSTRUG00000022515	-	52	62.712	ENSTRUG00000003111	-	84	62.712
ENSTRUG00000022515	-	51	45.070	ENSTRUG00000023491	-	63	45.070
ENSTRUG00000022515	-	87	88.889	ENSTRUG00000023925	-	96	88.889
ENSTRUG00000022515	-	56	39.326	ENSTRUG00000021167	-	87	39.326
ENSTRUG00000022515	-	82	51.445	ENSTRUG00000006896	-	98	46.522
ENSTRUG00000022515	-	67	47.692	ENSTRUG00000004140	ZBTB14	61	47.692
ENSTRUG00000022515	-	51	46.512	ENSTRUG00000015687	-	90	44.737
ENSTRUG00000022515	-	100	76.510	ENSTRUG00000001268	-	86	76.510
ENSTRUG00000022515	-	51	38.272	ENSTRUG00000014476	-	85	38.272
ENSTRUG00000022515	-	82	53.939	ENSTRUG00000019483	-	98	53.939
ENSTRUG00000022515	-	62	36.226	ENSTRUG00000003277	zbtb17	92	54.167
ENSTRUG00000022515	-	100	45.238	ENSTRUG00000020582	-	100	45.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022515	-	99	35.897	ENSBTAG00000016448	ZBTB40	50	35.897	Bos_taurus
ENSTRUG00000022515	-	100	45.614	ENSNBRG00000021247	-	96	45.614	Neolamprologus_brichardi