EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022519 (Gene tree)
Gene ID: 101062976
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 12137 bases
Position: chr8:1390485-1402621
Accession: 101062976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049908	RNase_Zc3h12a	PF11977.8	1.3e-65	1	1
ENSTRUP00000054281	RNase_Zc3h12a	PF11977.8	1.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000056828	-	3077	-	ENSTRUP00000049908	950 (aa)	-	UPI000298B542
ENSTRUT00000053329	-	2975	XM_003966427	ENSTRUP00000054281	950 (aa)	XP_003966476	UPI000298B542

Gene Model

Click here to download ENSTRUG00000022519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022519	-	89	41.768	ENSTRUG00000012186	zc3h12b	53	61.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022519	-	79	79.868	ENSAPOG00000015355	-	83	79.474	Acanthochromis_polyacanthus
ENSTRUG00000022519	-	83	47.431	ENSAPOG00000001632	-	78	73.433	Acanthochromis_polyacanthus
ENSTRUG00000022519	-	99	68.063	ENSACIG00000001362	-	97	68.796	Amphilophus_citrinellus
ENSTRUG00000022519	-	99	78.712	ENSAOCG00000003866	-	88	91.489	Amphiprion_ocellaris
ENSTRUG00000022519	-	99	73.097	ENSAPEG00000005727	-	99	83.333	Amphiprion_percula
ENSTRUG00000022519	-	72	77.358	ENSAPEG00000018582	-	98	83.333	Amphiprion_percula
ENSTRUG00000022519	-	85	46.482	ENSATEG00000002260	-	83	79.149	Anabas_testudineus
ENSTRUG00000022519	-	99	77.963	ENSATEG00000004134	-	99	76.923	Anabas_testudineus
ENSTRUG00000022519	-	64	53.600	ENSACLG00000018493	-	65	51.969	Astatotilapia_calliptera
ENSTRUG00000022519	-	99	75.412	ENSACLG00000027924	-	99	75.439	Astatotilapia_calliptera
ENSTRUG00000022519	-	83	73.945	ENSCSEG00000010073	-	98	74.566	Cynoglossus_semilaevis
ENSTRUG00000022519	-	50	61.010	ENSCSEG00000008542	-	67	52.352	Cynoglossus_semilaevis
ENSTRUG00000022519	-	99	72.574	ENSCVAG00000002328	-	99	72.490	Cyprinodon_variegatus
ENSTRUG00000022519	-	84	55.692	ENSELUG00000009319	-	95	55.006	Esox_lucius
ENSTRUG00000022519	-	85	50.587	ENSELUG00000005470	-	99	46.607	Esox_lucius
ENSTRUG00000022519	-	91	93.182	ENSFHEG00000021225	-	99	80.357	Fundulus_heteroclitus
ENSTRUG00000022519	-	99	71.174	ENSGAFG00000005290	-	99	71.144	Gambusia_affinis
ENSTRUG00000022519	-	72	44.872	ENSGACG00000001339	-	68	63.462	Gasterosteus_aculeatus
ENSTRUG00000022519	-	72	69.693	ENSGACG00000014201	-	99	70.029	Gasterosteus_aculeatus
ENSTRUG00000022519	-	99	75.851	ENSHBUG00000006831	-	99	75.335	Haplochromis_burtoni
ENSTRUG00000022519	-	99	61.967	ENSHCOG00000008878	-	99	87.755	Hippocampus_comes
ENSTRUG00000022519	-	99	73.551	ENSKMAG00000011694	-	99	73.235	Kryptolebias_marmoratus
ENSTRUG00000022519	-	96	76.948	ENSLBEG00000012554	-	99	80.982	Labrus_bergylta
ENSTRUG00000022519	-	99	76.756	ENSLBEG00000003547	-	99	76.732	Labrus_bergylta
ENSTRUG00000022519	-	99	44.929	ENSLBEG00000012710	-	67	52.833	Labrus_bergylta
ENSTRUG00000022519	-	86	46.613	ENSMAMG00000020372	-	99	43.517	Mastacembelus_armatus
ENSTRUG00000022519	-	98	73.033	ENSMAMG00000021794	-	94	88.889	Mastacembelus_armatus
ENSTRUG00000022519	-	64	53.600	ENSMZEG00005019137	-	90	66.026	Maylandia_zebra
ENSTRUG00000022519	-	99	75.514	ENSMZEG00005007718	-	99	75.542	Maylandia_zebra
ENSTRUG00000022519	-	71	55.385	ENSMMOG00000019526	-	70	55.385	Mola_mola
ENSTRUG00000022519	-	95	74.836	ENSMMOG00000005728	-	98	81.625	Mola_mola
ENSTRUG00000022519	-	99	76.684	ENSMALG00000010501	-	99	76.225	Monopterus_albus
ENSTRUG00000022519	-	80	51.597	ENSNBRG00000012175	-	90	66.667	Neolamprologus_brichardi
ENSTRUG00000022519	-	99	75.180	ENSNBRG00000006978	-	99	75.439	Neolamprologus_brichardi
ENSTRUG00000022519	-	99	75.334	ENSONIG00000012268	-	99	75.695	Oreochromis_niloticus
ENSTRUG00000022519	-	86	73.382	ENSORLG00000029243	-	96	75.662	Oryzias_latipes
ENSTRUG00000022519	-	99	70.063	ENSORLG00020017005	-	99	70.222	Oryzias_latipes_hni
ENSTRUG00000022519	-	99	69.620	ENSORLG00015015211	-	99	70.570	Oryzias_latipes_hsok
ENSTRUG00000022519	-	99	71.172	ENSOMEG00000006666	-	99	71.008	Oryzias_melastigma
ENSTRUG00000022519	-	64	79.299	ENSPMGG00000009790	-	96	81.457	Periophthalmus_magnuspinnatus
ENSTRUG00000022519	-	56	59.336	ENSPMGG00000020126	-	56	61.123	Periophthalmus_magnuspinnatus
ENSTRUG00000022519	-	99	72.193	ENSPLAG00000009867	-	99	71.651	Poecilia_latipinna
ENSTRUG00000022519	-	99	72.928	ENSPMEG00000006624	-	99	71.859	Poecilia_mexicana
ENSTRUG00000022519	-	83	45.844	ENSPMEG00000011676	-	99	41.625	Poecilia_mexicana
ENSTRUG00000022519	-	99	71.862	ENSPREG00000010838	-	99	71.757	Poecilia_reticulata
ENSTRUG00000022519	-	98	41.624	ENSPREG00000001607	-	73	78.070	Poecilia_reticulata
ENSTRUG00000022519	-	99	77.640	ENSSMAG00000007545	-	99	77.697	Scophthalmus_maximus
ENSTRUG00000022519	-	99	44.184	ENSSMAG00000007258	-	99	44.444	Scophthalmus_maximus
ENSTRUG00000022519	-	83	49.405	ENSSDUG00000013237	-	90	62.914	Seriola_dumerili
ENSTRUG00000022519	-	99	79.115	ENSSDUG00000021864	-	99	78.395	Seriola_dumerili
ENSTRUG00000022519	-	83	48.929	ENSSLDG00000004886	-	83	49.822	Seriola_lalandi_dorsalis
ENSTRUG00000022519	-	99	79.115	ENSSLDG00000012268	-	99	78.395	Seriola_lalandi_dorsalis
ENSTRUG00000022519	-	99	77.926	ENSSPAG00000009485	-	99	78.064	Stegastes_partitus
ENSTRUG00000022519	-	99	44.411	ENSSPAG00000001850	-	99	44.356	Stegastes_partitus
ENSTRUG00000022519	-	62	81.619	ENSTNIG00000014519	-	97	92.683	Tetraodon_nigroviridis
ENSTRUG00000022519	-	99	71.996	ENSXMAG00000027171	-	99	71.954	Xiphophorus_maculatus
ENSTRUG00000022519	-	99	42.525	ENSXMAG00000014715	-	85	78.059	Xiphophorus_maculatus