EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022843 (Gene tree)
Gene ID: 101067491
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 585A-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3042 bases
Position: chr17:6276282-6279323
Accession: 101067491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	1	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	2	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	3	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	4	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	5	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	6	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	7	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	8	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	9	10
ENSTRUP00000057185	zf-C2H2	PF00096.26	4.9e-66	10	10
ENSTRUP00000057185	zf-met	PF12874.7	7.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000048959	-	3042	XM_003972333	ENSTRUP00000057185	1013 (aa)	XP_003972382	UPI000298EC16

Gene Model

Click here to download ENSTRUG00000022843's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022843	-	51	34.286	ENSTRUG00000011637	scrt1b	58	34.286
ENSTRUG00000022843	-	64	38.824	ENSTRUG00000023491	-	60	36.782
ENSTRUG00000022843	-	74	34.483	ENSTRUG00000022066	-	91	38.028
ENSTRUG00000022843	-	50	34.524	ENSTRUG00000019941	-	57	34.524
ENSTRUG00000022843	-	69	31.158	ENSTRUG00000021675	-	79	31.158
ENSTRUG00000022843	-	64	45.912	ENSTRUG00000023925	-	58	45.912
ENSTRUG00000022843	-	68	35.897	ENSTRUG00000011097	-	59	35.897
ENSTRUG00000022843	-	68	37.963	ENSTRUG00000017456	znf236	68	37.963
ENSTRUG00000022843	-	67	42.487	ENSTRUG00000019483	-	94	40.408
ENSTRUG00000022843	-	64	30.000	ENSTRUG00000011385	znf341	51	30.000
ENSTRUG00000022843	-	68	30.189	ENSTRUG00000006180	si:ch211-216l23.1	97	30.189
ENSTRUG00000022843	-	61	46.154	ENSTRUG00000003111	-	89	46.154
ENSTRUG00000022843	-	50	35.238	ENSTRUG00000012719	-	54	35.238
ENSTRUG00000022843	-	64	34.409	ENSTRUG00000015366	patz1	55	34.409
ENSTRUG00000022843	-	67	32.727	ENSTRUG00000025597	znf646	99	32.727
ENSTRUG00000022843	-	59	38.889	ENSTRUG00000004140	ZBTB14	55	37.838
ENSTRUG00000022843	-	66	36.120	ENSTRUG00000024073	-	64	36.120
ENSTRUG00000022843	-	74	39.583	ENSTRUG00000020582	-	86	40.611
ENSTRUG00000022843	-	65	45.652	ENSTRUG00000003369	sall3b	58	40.625
ENSTRUG00000022843	-	50	35.238	ENSTRUG00000019558	-	60	35.238
ENSTRUG00000022843	-	68	38.700	ENSTRUG00000012273	-	76	38.318
ENSTRUG00000022843	-	74	41.525	ENSTRUG00000007022	-	78	43.396
ENSTRUG00000022843	-	68	40.244	ENSTRUG00000019940	-	57	41.875
ENSTRUG00000022843	-	58	37.805	ENSTRUG00000024008	-	56	36.250
ENSTRUG00000022843	-	68	31.990	ENSTRUG00000005880	-	54	32.242
ENSTRUG00000022843	-	69	40.000	ENSTRUG00000003277	zbtb17	98	41.860
ENSTRUG00000022843	-	68	47.429	ENSTRUG00000015687	-	94	45.641
ENSTRUG00000022843	-	68	35.455	ENSTRUG00000013850	prdm5	75	35.455
ENSTRUG00000022843	-	68	31.250	ENSTRUG00000003454	-	79	33.158
ENSTRUG00000022843	-	67	42.029	ENSTRUG00000022919	-	83	42.029
ENSTRUG00000022843	-	64	36.975	ENSTRUG00000020208	-	69	35.897
ENSTRUG00000022843	-	69	41.781	ENSTRUG00000005321	-	96	36.278
ENSTRUG00000022843	-	50	34.286	ENSTRUG00000007620	scrt2	50	34.286
ENSTRUG00000022843	-	69	35.922	ENSTRUG00000019685	znf319b	86	37.179
ENSTRUG00000022843	-	50	40.260	ENSTRUG00000025588	snai2	56	40.260
ENSTRUG00000022843	-	68	45.070	ENSTRUG00000001268	-	97	40.058
ENSTRUG00000022843	-	67	37.398	ENSTRUG00000022666	-	50	37.398
ENSTRUG00000022843	-	57	40.994	ENSTRUG00000004525	gfi1b	52	40.994
ENSTRUG00000022843	-	68	42.105	ENSTRUG00000000995	-	72	42.105
ENSTRUG00000022843	-	67	40.523	ENSTRUG00000013906	-	92	40.523
ENSTRUG00000022843	-	58	42.982	ENSTRUG00000025189	-	66	43.103
ENSTRUG00000022843	-	67	39.301	ENSTRUG00000022206	-	54	40.580
ENSTRUG00000022843	-	68	35.439	ENSTRUG00000022076	-	82	36.842
ENSTRUG00000022843	-	71	40.659	ENSTRUG00000006896	-	90	40.659
ENSTRUG00000022843	-	67	38.750	ENSTRUG00000021765	-	81	38.750
ENSTRUG00000022843	-	76	31.218	ENSTRUG00000009203	zbtb41	51	30.409
ENSTRUG00000022843	-	60	36.538	ENSTRUG00000022391	-	50	36.538
ENSTRUG00000022843	-	67	43.229	ENSTRUG00000005180	-	86	43.229

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022843	-	98	66.964	ENSAOCG00000013656	-	100	66.243	Amphiprion_ocellaris
ENSTRUG00000022843	-	72	56.835	ENSHCOG00000000800	-	86	56.835	Hippocampus_comes
ENSTRUG00000022843	-	82	45.946	ENSKMAG00000007892	-	82	51.954	Kryptolebias_marmoratus
ENSTRUG00000022843	-	71	70.213	ENSLBEG00000005715	-	86	70.213	Labrus_bergylta
ENSTRUG00000022843	-	94	56.212	ENSOMEG00000021903	-	99	51.699	Oryzias_melastigma
ENSTRUG00000022843	-	58	50.877	ENSPMEG00000019463	-	81	52.419	Poecilia_mexicana
ENSTRUG00000022843	-	97	65.982	ENSSMAG00000021271	-	97	65.837	Scophthalmus_maximus
ENSTRUG00000022843	-	98	65.239	ENSSDUG00000016450	-	100	65.251	Seriola_dumerili
ENSTRUG00000022843	-	95	52.270	ENSSPAG00000023063	-	99	57.927	Stegastes_partitus